Array 1 29622-29388 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLWA010000020.1 Enterococcus sp. DIV0660C scaffold1.20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 29621 36 100.0 30 .................................... GTCTGTTGTATGTTGTAACTCAATTTGAAC 29555 36 100.0 30 .................................... TTTCCCTGTTTTACCTGTTACTGCTATATG 29489 36 100.0 30 .................................... TATATACCAACTTTTTTTACTAAGGTTCCT 29423 36 83.3 0 .........................AGA.A....GA | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 95.8 30 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : AGAAATCAAAACGAAAATTGATCACCTGTCGATGGAAATTGCCAAAGTGATGCAGCATGAGTTGTTAGAACATGCGCTAGATCTTGAAGAAGATGAGTTGACCCTCATGGAGATATTTAAGTGTTTAGGAATACGGATCGAAACAAAAAGTGATACTATTTTAGAAAAAATGATTGAAGTAATCCAAGTATATCGTTATCTAGTGAAAAAGAAATTATTAGTATTTGTGAATGCTTGTTCTTATTTAACAAAGGCAGAATTACAAATATTAATTGACCATATTTCTTTATACAATGTGGATGTATTATTTTTGGAACCTAGACCAGTTGAGGGTGTTACTCAGCAAATTCTAGATCAAGATTATTTTTTGACAACAAAATAACAGATATCACTTATCTTTTCGTTCTTTGACAAGTAAATCGAACTAATGAAGCATTCATGCTGAAGCCTTGCTATGGGCGAATAGTGCGATTACGGAACCTCAAAAATATTTATCCGAG # Right flank : TTATTTTTCCTGTTGTAGATTGAAAATATGTTTGAGTTAGTATTGATAGCAGGTGTGTTGCTCTCAGTAATATTTCTTTCATGCTGAAAAGGTCTACCAAGCTTTCTAAGACAAATGGGAATCCTTCGTGAGTTCGATACGATGATCCTCACTACCGCATACACACTGTTCACCGACAAAAGATAGTTGATGTCAAGTAAAGGCTATCTGAATTTTCTGTACGATGACTCTAGCGAATTCTTGATATAATCAGAGAAGTAATTGTTATGGATTTAAAGTATGGTTACTTGAGATTTATGATAATCATGTTCGACACAGTTTTATAAAAATAAAGACAAAATCCTACAAACACAGTATTTTTTCTGTGTCTGTAGGATTTTTTGCTTATCATAAAATGAAAAACCGTAGAGCCGCCAAAGAAATCATTCCCACGATGACGATTACTAATAAGTTTTTAGAAATGATTGCACTGAGAACAGTTGGCAAGGAAGCAAATAAGT # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 12915-13280 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLWA010000023.1 Enterococcus sp. DIV0660C scaffold1.23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 12915 36 100.0 30 .................................... TAATCAGTGGGAAGAATTTCAACTGGAATT 12981 36 100.0 30 .................................... TAACTGTCATCTTAGACCTACCCTTTTAGT 13047 36 100.0 30 .................................... TTTGGAAAAATTTAAATGCTTTGGTTGATA 13113 36 100.0 30 .................................... AACAGTATCAGATGAGTTTGTTCGAGGAAT 13179 36 100.0 30 .................................... ATCTCGAACGAAAAAGACACTCAATAGAAT 13245 36 91.7 0 ...............................C..TT | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 98.6 30 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : CTAACTGGCCCACTTTTTATCCAGCTGATTTGACTTCACAAGAAATTGCACAGGAAATGATTGCACATTAAGACTTATGTATGATAGCAAAAAACGAGGACTTTTGAAGTCCTCGTTTTTAGTTTAGTGTGCGTATAAGAAAGCAGATAGGAGGTGCAAATAATCAACATGACCAATAAACATTCAGACAATCCCCAACATTTTCAAGTCAACTATTGATCGCCATCTTTCAGATGGAACAATAATCAAAAATAATTCCTCCCAAATAATAATTGTATTTTAACAATATAATTGCTTGGAAAACCAGTAAAGTAATATGTAACGAGTGAACAATTTAGTTATAAAAAAATAGCAATCGGTAGTTGGGTTAGTAAAATAATGATATACTGAGAAAAAGAACCTTGAAATCTAAATAAGTGAAGACCAATAGAAGCATCCAAACTGAAGCCTTGCTATGGGTGAATAGTGCGATTACGGAACCTCAAAAATTTTTATCCGAG # Right flank : TAAGAATAGCTGTGTTTATCAATAGTAGAATAAGCAAAAGAGGATTTCCAACTGAGCCATTTGAAGGAAACGCGTTTGCAGTAACTAGCCATATTCGTCAGAAAAATAGCAAATAATTTTTTGATAGTGATTCCAAAAAAACCACCAACTAGTTGGTGGTTTTTTTATTGGGTAAATATTTGGGAATAACAAACATGAGAAAATATCGTACTAATAAATTAAGTTGGAAGATAGGGATAATTTATTAGTATAGATATTATTATAACGTATTTAAAACACGTTTATGATTTGTTTTTTTTATAGTTATTATTATCTTTTTTACCTAAATCAGGTTGCCTGAAATTGACTATTGTAAAGTGAACGATAGAGTGTTGGACGTTTCAACAGTTGTTTATGCGTTCCTTTTTCAATGATATCGCCCTTATCCATTACTAAAATTAAATCAGCATTTTCAATGGTAGATAGGCGGTGGGCAATGACGAAACTCGTCCGATTTTGTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //