Array 1 160956-157392 **** Predicted by CRISPRDetect 2.4 *** >NZ_VITO01000009.1 Nitrospirillum amazonense strain BR 11865 Ga0314208_109, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 160955 32 100.0 33 ................................ GCCGGAAGCGCCCTCCTCGTCGCCGGCCTGATC 160890 32 100.0 34 ................................ ATGGCGATGCCCTTGTTGAAAATTGAGTTGCGAT 160824 32 100.0 34 ................................ CATCCTGATAGAGGAGGATACGGGCATGCCGCTT 160758 32 100.0 35 ................................ CCCAACGAGGTGGCGCTTATCCACGAACTGGGCGG 160691 32 100.0 35 ................................ AAGGCGCTGTCGAGCAGATGTCGGGCTGCATGGAG 160624 32 100.0 35 ................................ TGCCTGGCACCGCTGCATTGCGGCTCGGCAAAGAC 160557 32 100.0 36 ................................ GGCGGTGCGGAACTCCAGGTCGATCTGGCTGAGCAG 160489 32 100.0 35 ................................ TCGGCCTCGCCCTGCATCGCCTTCAGCGTGGCGGC 160422 32 100.0 35 ................................ GGACTCGATCTTGACGTTGGTCATCTGCAACTCGA 160355 32 100.0 35 ................................ ATCTAAATGCAAGGCGAAAATGATCGCCCTCCGCC 160288 32 100.0 34 ................................ AGGGCAGATCGAGGGTATGGAGATAAAATCTGGC 160222 32 100.0 34 ................................ CCCGTAACACGTGGCATCCGTGAGCGCCAGGCGG 160156 32 100.0 34 ................................ ACCTTGGCCGGATAAATGGCCTTACGAAGGGCGC 160090 32 100.0 35 ................................ GCCTGGTGCGCCCCGCCAACATCGACTACATGCCC 160023 32 100.0 35 ................................ TGGACCAAGCCGGGCGACCCCACGGCCTTGGCCCC 159956 32 100.0 35 ................................ AGCTTCGCCTTTGGCCTCATCCACGGCCTTGTCGA 159889 32 100.0 35 ................................ TAGCCGATGAGATCGTGGAGATTGCCGACAACGGC 159822 32 100.0 35 ................................ ACCATTACCTGGCATGGGCTGTACCCTGAGCCGCC 159755 32 100.0 35 ................................ GATGCCATGGCCGAGGCCTTCAGCATTGGCGACCA 159688 32 100.0 33 ................................ AGCCACATCAGCACCGCCCGGCTTGGAGCGCAG 159623 32 100.0 35 ................................ GGCCCCGGGAAGAGCGTCGGGCCCGTGGGCCAGAT 159556 32 100.0 35 ................................ AAGGCGGTGCTGTCGGGCAAGGCCAGCGACGCGAC 159489 32 100.0 35 ................................ TCGGTCTTGGTGATGCCGCGCACGACGACGGGGCC 159422 32 100.0 35 ................................ AAGGCGGTGCTGTCGGGCAAGGCCAGCGACGCGAC 159355 32 100.0 35 ................................ TCGGTCTTGGTGATGCCGCGCACGACGACGGGGCC 159288 32 100.0 35 ................................ GATGCCCTTGAACGCCCGGGCCGCCTCGTTCTCGC 159221 32 100.0 34 ................................ ATCAGCTTGGAGAGCGGCTTGTCGTTCCGCTCTC 159155 32 100.0 35 ................................ ATATCGGCGGTCAGGTAATAGGTCTGGCCGGCGAC 159088 32 100.0 35 ................................ CCCGTCGCCGTGATGTGGGCAACCATGCTGGCGGC 159021 32 100.0 35 ................................ AGACTGAGATGGCCCTGACCGATGCGATCCTGAAA 158954 32 100.0 33 ................................ AGCGGCGGCGTCACAGCAGGCCATCCAGCAGGG 158889 32 100.0 35 ................................ CTCCCGATGCTCCCGAACTCCCGAAACCAAGAGGC 158822 32 100.0 35 ................................ CAACGGCAACACGCTGGGCGACATGGTCACCCAAG 158755 32 100.0 35 ................................ ATCCTGGTCCCCGCCGTGCACATGCCGCGCAAGCT 158688 32 100.0 34 ................................ GCGCTCCGCCAGGTCGGGATAGCTGGTGGCCAGC 158622 32 100.0 37 ................................ CGCAGCCCTCCCCACGAAGGCAAAGAGGGACGCCGGC 158553 32 100.0 34 ................................ TATGAGGAATTGAACCTGCCCCAGCCCAGCTGGG 158487 32 100.0 34 ................................ GCGATGTCGGTGAAGCTGTTCGCCACGGATCGCG 158421 32 100.0 35 ................................ AAACGCAGTCGGCGCATATGTCGAATGCGGGCGGA 158354 32 100.0 35 ................................ CTTGGTTATCGATGCTGTGTTTGACAGCCTGCGGG 158287 32 100.0 33 ................................ GGCGTGGGGACGATGATTGCCAAGCGTACTGAT 158222 32 100.0 34 ................................ GCCTCACGGGCCGCCATCTGCCGCATGCGCCGTT 158156 32 100.0 35 ................................ CTGTCCAGCACCAGCGGCCTGACGTCGGCCGGCCA 158089 32 100.0 35 ................................ AAGCGCGGCCGGGAAGTCATGTGGGAGCTTGACCG 158022 32 100.0 35 ................................ ATCAGCAGGTCCAGCGGGCGCTCGATACGCTCCAG 157955 32 96.9 34 ........T....................... TCTCTCCATGCTCTCCGCCTCCTGGGCGGGTGTG 157889 32 100.0 35 ................................ AAGGCCGGGCTCGCGGGCAAGGCCGACAATGCGAC 157822 32 96.9 35 .......................A........ TTCGCCCGCAGCGCGGCCCACCTAGCCGTCTTGTA 157755 32 96.9 34 ...............G................ TCCAGGGCCTGCGGCTCATGCCGCATCCCCGCCT 157689 31 96.9 35 ...............-................ ATGTCACCGACCAGGCCGGTGCGGCCCATGCGGTC 157623 32 96.9 35 ...............G................ TCGGTTCACACCGGCAGTACCTGGCGCCCGCGCAG 157556 32 93.8 34 ...............G...T............ TCATAATCCCATATGTTCAGGCTTGGTGGCTTGC 157490 32 100.0 35 ................................ AGCGTGACCTCCAGCTGGCGGGCGTCAGCCTGGAC 157423 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 54 32 99.6 35 GCCGCCCTCCGTGCGAGGGCGCGGATTGAAAC # Left flank : CCACCCATGTTGATGCTGATCACCTACGACGTGAACACCGAGGATGCCGCCGGCCGGCGCCGCCTGCGCCGCGTGGCTCGGGCCTGCCAGGATCATGGGCAGCGTGTGCAGTTCTCCGTCTTCGAATGCGAGGTCGATCCCGGGCAATGGGTCGCCCTGCGCGCCCGGCTGTTGGCGGAAATCGACCCGGCGACGGACAGCCTGCGCTTTTACCACCTGGGCGCTGACGCCCAGCGGCGTATCGAGCATGTCGGCGCCAAGCCGGCCCAGGACCTGGGCGGCGCCCTGATCTTCTGACGGGGCTCCGCCACGCGCGGAAGGTGCGCGAACCGGAAGCACACGCCTGTTTCCCAGGAGGTTCGCGCGACGAATTTTCCAGCCACCGCCAAAGGCTTGGCCTAGAATGCTACCCCCAGCCCGGGATGACAAACGCCCTATCGGACGAGGTTCGCATAAACCGGGCGGTTTCAAGTTCTTGAACAAGTGCATAAACTGACACA # Right flank : ACCAACGCGGACATCGTTGTGAAGCGCCCCGAGTTTGCCGGAGGCTGACTGTTGTGAGTCATGCCGCCAAGGTTTGGTTGTCGGCGGCAGCATAGTAGCGCGCCTCGGCCTCGGCTGGCGGGATATTCCCGATGGGGGCCAGCAAACGGCGGCGGTTGGCCGACATCTCAAGACGGGGCCTTACGCGCTGGAACAGCAAGGGATGCCGGGAACTGTGGACTGGAGGCACACCTAGTCAACTCGTGATCGTGGCTTTGTGGCCCATCGCAGCGACGAGTTCCTCGACCACCTGGCCGCTCAGGGTTCCGTGTCGCTGCAGCAATTCCGCTACCTCGTTGAGGATTGGGCCGCGAGGTCGCAACAACTCCAGGACGCTCTTATATTCGCCGGTTACCACGCGTTCCACCTGGGTCGCTATGCCGGAGTCCGCCATCAGGACGCTTGCCAGGGTGGCGCCGCCCCACGCCCTGACGTCGCCACTCCAGATCAGCTTGTCGCCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCCCTCCGTGCGAGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-12.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : NA //