Array 1 280604-280828 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWIX01000001.1 Clostridium botulinum strain SU1297 Cbot0037o-SU1297_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 280604 30 93.3 35 ........A...G................. TGAAAAACATTAGAACCACATCCACAAGGGTTTCT 280669 30 96.7 35 ........A..................... GCTAAATTCTCATAAGAACCACGCCATCTGTCCTC 280734 30 100.0 35 .............................. TTATGATATGATTTTATTTGTTTAAGAGTATCTGC 280799 30 96.7 0 .........................C.... | ========== ====== ====== ====== ============================== =================================== ================== 4 30 96.7 35 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : ATCCCGCATGGCATCAATTTTATCATAGGCATAGGTTAATCCAATAGTTAAAAAAAGGTCTGCGGTTATATCAGAATGAGTAAGGGTGTAGCGTCTTCCTAGAATAGGTTCTGTATTAGTTACTCCATCTCTAAATTCCACTGAAAGTTTTTCAGGGTTCAATTTGCTCATTTAATCCCTTCCCGTACAATATTTCTCATAGAACTATTATATGATTAGGTTAAGGAAGTTGTCATTTAGGTAGCTATAAAATTTATTATAATATCATTAGCGCTATATAAATTTATAAAAAGAATATTAAAATAAAAGAAAAGAACAAAAATTTTTCCAACCGACTTTAAGTTGAAAATTTATGGAGACTATTGATATATAAGGGTTTAGGTTAGGTTTTTTATGTAAATTTGAAAATATCCTAATCGGTTGGAAAATTTTATTTATAACCTTGTAAAATCAATGGTTTTATGATATTCTTGAAATTAAGGAATGGCTATTTTACTATG # Right flank : TACTATATCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAAGTTCCTTTTAGGTGCAATTATTTTTGGGGTATTGACTTGTAGTCTAAAGTTGCACCATAAGAAGGTTCATTAAACACATGTGGAAGAACAAGTAATAGATACAGCACTTGCTATTGATACGGTGAATTGTATTACAAATAACGAAGGTTTTATTTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTCCTAAGTTGTATCATAACCTAAGTAAATTATAAAAATATATGTTTATATTTATTTTAAGACTATTGTATTAATATGATTCATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGAAGTCTTAGATTTTTTATTGCATGAGATTATACGGAAAATATTAATTTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACCTACAATGATAAAGTAGGTCCTGATTTTTATTAA # Questionable array : NO Score: 3.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 284619-284911 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWIX01000001.1 Clostridium botulinum strain SU1297 Cbot0037o-SU1297_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 284619 30 100.0 35 .............................. CCTCATTTTTGAATTATGAATTACTTATTGTTTTG 284684 30 100.0 36 .............................. AATAGAAGGGCTTAACTATAGATTCCCGATACTTGA 284750 30 100.0 37 .............................. TAATCTTCTAAGTAAGGTATCATTACTGACTTAACCT 284817 30 100.0 35 .............................. ACTACCTAATGTTCTTTATTTTAAAATCACAAGTA 284882 30 86.7 0 ...A...........A....A........C | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 97.3 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : CAATACTAGGAGTAGCTAAAGGACTGCTGATGTATAGTACAAAATTGACATAATATGATATACAATGTTTGTGTTCATCAACTAAGAAAGACATTTCTACCTTTCTTAGTTGATGAACAATTTTCTTATTTAACGACTGAACTATAAAATCAAATAATTTTTCTAAATGCTGTATTATTCAGAAATGAACTTTACGGCATTTTTATGTCGCAATACAATTATATTGTAAAGTTAGATGTATTTAAGTAGTAAATATAAATCTGAGATTTAGTGTGAGGCGCTTACTCATTTGAGGAAGCGAGAAGGAGTTCTACTGACTGAATTTTTCCAGCCAAAATAAATTTTAAAACCTATTTTGAGCGTTGACACATAAGGCTTATGGTAGGTTTTTATTTTATATTTGTAAAAAAGCAAAACTACTTGGAAAACTTTCTTTAAAATCTTGTAAAATCAATGGTTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : CTGTTTAGTTACTGCAGATATTCGTTTTTAATATTAACATATGAATTAAAAATTAATATGATATATGACAAAAATTATTAAGAGTCTTAGAAGAATCTAAGGCTTTTTATTTTATGTAAAGTTTTAAAATGGAATATAATAGCTAATTAACTTATTATTAATAAAAATAATAATATTTTTAAAATATAAGTAGAATAATTAGTTATATTAACTAAAGGGTGTATGATATAATATAGATAAATTTGTATAAAGACATGTATAAATGGAATTTTGGGAACTGATTGTAACAGTAGATGATAGACCTTGGCTGCAAAATAATGGGGATTTAGATTTATTTACGCGTAGATTGGAAGATAATTTGGAAAAGAAATATAAAAAACTTTTTTAATGAAGATATAGATGTAAAGGATAAATTTATAAAGAGCATAGAGTTTAAAAATAGAGAGCCAATGCATTACGACTATAAAGGTATAAAGTTATTAGCAAATAAGGTAAGTATA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //