Array 1 1469802-1470927 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAIWIY010000001.1 Anaerococcus degeneri strain FDAARGOS_1538 000000F_arrow_pilon, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
   1469802	    29	  96.6	    31	............................A	AAATCAATCTACCTTATATATACCAATAAGG 	
   1469862	    29	 100.0	    32	.............................	ACGAAACAAGGCTAAAAGAAGCAGGCGTAGAC	
   1469923	    29	 100.0	    32	.............................	CTTTGTAAATTCGATTGGCTCGTGGTCACTTT	
   1469984	    29	 100.0	    32	.............................	AACGAATAATTATTCAAAAGTAATTAAAATAA	
   1470045	    29	 100.0	    32	.............................	ATTTGTGATCATTGTTTCTTTCTGTCGGTCTT	
   1470106	    29	 100.0	    32	.............................	CCATCTCCTAAATTCCAAAGACACTTTTCTTA	
   1470167	    29	 100.0	    32	.............................	GGAGATATTTCTGCAAAAGAATTCTATACAAG	
   1470228	    29	 100.0	    32	.............................	AAAATCAGTAGAGAAAATCAGGCAAGCGATGT	
   1470289	    29	 100.0	    32	.............................	GAACGATAGAACCAAGATATACAAATTGTTAC	
   1470350	    29	 100.0	    32	.............................	GACGGATTAGACAGGGACGTAGTAGAAGACCT	
   1470411	    29	 100.0	    32	.............................	TCATCTGGTGTAATTTGCCCCCAAGGTGTAGC	
   1470472	    29	 100.0	    32	.............................	ATAATTTTAATTTTAATATTTGGTTTTCTTGT	
   1470533	    29	 100.0	    32	.............................	AACATATTCTTCCCCACCTGCTTCTACTTTTT	
   1470594	    29	  96.6	    32	............................C	AAAGAAGTTATAAGCAAAGCGGCTGAAAAATG	
   1470655	    29	 100.0	    32	.............................	TTGAAAACTTCGCCAGCTTTTAGCTCTTCTAA	
   1470716	    29	 100.0	    32	.............................	TTTTTTCGTTTGCGGGTACGGCGACCCCGAAA	
   1470777	    29	 100.0	    32	.............................	GATTTCACGGGTTGGAGCATATACTTGAAACT	
   1470838	    29	 100.0	    32	.............................	ACCATCTTGTTACACAAACAAACATTGTTAAA	
   1470899	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        19	    29	  99.6	    32	GTTCTACCCGCACAGGCGGGGATGATCCT	                                	       

# Left flank :   GGGCGATAAGAATCGGCAAAGAAATCAAGGAATACTCTACAATTATGGGGCAGGAAATGAAAATTCCAGAAAAAATAAGGGACCTAACTGGGATAAGCGAAGAAGATATAAAAAAGGGAAAAGATGAAAAAAGGGCTATAAATGAACTTTTACATTTTATAGGAGAGGATACTCTCGTAGGCTATAATATAAATTTTGACATAAAATTTATAAATGAGGCCCTAAAGAGGCAGGAAAAACCTAAGGTTAAAAATATGACCTATGATGTCATGAAATATGTAAAAAACGACAAACTTTTTCTTAAAAATTATAAGCTAGAAACGGTAGTAAAAGAATACGGAATAAATGAAAAAGTGCCTCATAGGGCCCTAGAAGATGCGAGAATAACTCAAAAGTTAATAGGAAAGCTAGAAAAGCTTACAAAAAGACTAGAAAATCAAAGTGAATGAAAACGCTTAAAATTGAGATGCAAATTGGCTAAATAATGGGATTTTTTTAAT
# Right flank :  TAAGTGGGAGGATTTAATGGATAAGAAGAATGATGTTATATCTAGTCCTAACCATTATAAGTTAGATGGATTGGATATTGAAGTAATGATATTCTCAGAAGTGTATTGGGTACTGTTGGTTTTCTTAGCTTTTATAAAGGTAATATAATTAAGTATATTTTAAGAGCCAACAAAAAGAACGGGCTAGAAGACTATAAGAAGGCGAGACAATACTTAGATTGGTATATTCAAGAGTTGGAAAGTGACATGGATTGTGATGGTCGGATGTCATATTTATAAGCGGAGGATAAAATGAATAGAGAATTAACACCTGAAGAAGAGCAAGAACTTAGTGAATTGAGTAGGCAATTGGTACGTACAGCACCACCTATTACAGAAGAAATGCAAAGATATTATGAATTGGATGAAAAAAAGTATGGAACTAAGGAGGAACAGGCCGAGGAAATTAGACAAAATCGCAAAAATTTCTTCGCATTACAAGAAAAATTGAGTAAAAAGGT

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCTACCCGCACAGGCGGGGATGATCCT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCTCCCCGCGCAGGCGGGGGTGATCCG with 90% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-9.80,-8.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.78   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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