Array 1 239204-238200 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNR01000004.1 Streptomyces yeochonensis CN732 BS72DRAFT_unitig_1_quiver.4_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 239203 28 100.0 33 ............................ GGCGCCGGCCGACGCCATCGCGACCGCCGGTCC 239142 28 100.0 33 ............................ CCTCTGTGTGCCCCGTGTATCGCCTCTCGCGCC 239081 28 100.0 33 ............................ GTATTCGCCACACACGCACGCAGAGGCCATGGA 239020 28 100.0 33 ............................ GTGTGCGCACTACGGTCCCGCTTTCGGGATCTG 238959 28 100.0 33 ............................ GCTGACCGAGGAGACCGGCGAAGTCGCGCAGGC 238898 28 100.0 33 ............................ CTGAACGCGTCTGACGGCTGCCTCCCCCGCCCG 238837 28 100.0 33 ............................ CTTGTCCGCCTCGATGGCGGTGTCCCGCGCGGT 238776 28 100.0 33 ............................ GACCCCTACGTCTGACCCTCGGGTCTTACTCAC 238715 28 100.0 33 ............................ GGCCGCAAAGGCCCTTGGCGGGGACGGCGGAGG 238654 28 100.0 33 ............................ GGCCGCGTTGGGCCTGACGGCCGGGGACGTGAT 238593 28 96.4 33 ........................A... GGCGCGGAGGACTGATGGGCGGCATGGAGATGG 238532 28 100.0 33 ............................ CCCTCGGCTGTCGTCCTCGCGCTCCAGGTCGTC 238471 28 100.0 33 ............................ CTGAACGCGTCTGACGGCTGCCTCCCCCGCCCG 238410 28 100.0 33 ............................ CTTGTCCGCCTCGATGGCGGTGTCCCGCGCGGT 238349 28 100.0 33 ............................ GCCACGCCGACGTCAGCTTGGCCGCGTTCGCAG 238288 28 100.0 33 ............................ GCTGGTCCCGTCCGCGTTTTCGAAGTACGGGAC 238227 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.8 33 GTCGTCCCCGCACCCGCGGGGGTGGTCC # Left flank : GCCGTACCTGCTGGCCATGGCCAACGCGGGCCCCGGCACGAACGGTTCGCAGTTCTTCGTCACGGTCTCCCCGACCACGTGGCTGACCGGGAAGCACACCATCTTCGGCGAGGTCGCCGACGAGTCGGGGAAGAAGGTCGTGGACGCCATCGCCACCACCGACACCAACCCCCGCAACGACCGCCCGGTCAACGACGTCGTCATCGAGTCCGTCGAGATCCAGACCCGCTGACCCACTGACGCGCTGACGCACTGATCCACTGAACCGCTAAACCGCTGAACCGCTCCGCCATGACCGAGAAACCGACCGACCGACCGCGCCTGGACGGGCTCGGGCATCCTCCACGCTCCCCGACTCCCGGGCCGACGCGGATACAGTGGCCCTGGGCCTGGTTGGGCCCCGGACACACCACCGGCACAGCCCTCGGAGCGGAAGCCCGACCACGAAGCACGTAAACGAAAACCGGCACCCTCGCTGACATCACCGCAGGTCACGAAGT # Right flank : TCCGTCCCGCGTACGCCAACTTGCCGGGCGGAGGCGGAACTCCGGATGCTCGACACCCGGGACGGACCCGGGAGCGTCAAGGAGTACACCGACAACCTGCTCAGCCTGGCGGAGGTGGTCCTCAGTGGCCCCCGGCACTTCTTCCGGACGTGCTCGGCCTCCGAACTCGGCCGCTTCATGACCAGCTCAAGGAGGGTTCCAGCACCATGACGGACACCACCACCGGCCGCGTCCACCACCTGAACCTGTACCGCAAATACTTCGAGCTGGTCACGGCCGGCAGTAAGACGACGGAGGTACGTGTGAAGTACCCGCACCTCGCCGACCTCCGGCCCGGTGACCAGATCCGCTTCCACATCAAGGACACCGACGAGACCTGCGTCGTGAAGATCCAACGGGTCAGCGAATACACCGACTTCGAGACCCTGCTCGACCGCGAAGGCGCGGCCACCGTGAACCCGACCGCGTCGCGGGAGGAGCAGCTCGCCGACATCCGGGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1299071-1298558 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNR01000005.1 Streptomyces yeochonensis CN732 BS72DRAFT_unitig_0_quiver.5_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1299070 29 93.1 32 ...........C.G............... GGGGCACCTCGCCCTTGACCCATTTGTACGGC 1299009 29 96.6 32 ............................A GACACCATCATGGGGAAAATTCCGCTCACCCC 1298948 29 100.0 32 ............................. GGTTCCACGGTCTCCGATCCGGACCTGATCTT 1298887 29 100.0 28 ............................. GGGGGTTCGTCGCTGTAGCCGGTGCCCC 1298830 29 65.5 32 ACGGCT..TC.C.G............... GCGTCGAGGCTGACGTCGGGGGTGTTGATGCC 1298769 29 89.7 32 ...........C.G..............T TCCGTCTCGATGGTGGCGAACCGCTCGTCCTG 1298708 29 86.2 32 ...........C.G.......G..T.... TGTGCTCGCTGCGGCGCTTTCCCGGGACTGTG 1298647 29 96.6 32 .................C........... GCCGTGATCCGCACGGCGAACCCCAGGGACAT 1298586 29 93.1 0 ...........C...C............. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 91.2 32 GTCCTCCCCGCGCACGCGGGGATGCTCCC # Left flank : GACACCCCCGCGAACGTGACCAACTTCCCCGACGGCTACGCCAACGTCGCCACCAAGTGCGTCGCCGGCGCCCCCGGCTTCCGCGCCTTCGTCACCACCCGCGAGGCCGCTCCCGTCATACTCGCCGACCCCGCCTGCAAGGGCTGACCCCAGCCGTCCCGAAGGTCGGGTTCGCCAGGCGACCGCCGGACGGTGACCCGCGGGCCCAGCGGGCGCGCCGAAGTCCGCACGAGCGGTGGAGGGTGATACCTCGGCCAACCGGGTTCAGTCGGATCGAGCCGATTACGCTTGCCCATCGGGCCTCGGCGCAACCTCAGGGCGACAATGTGCCGATGGCGCGCGGTACACCAGACGTGTCCGACAGACGGGAGCGGAGCCGTCCTCCTCGACTGGGGTGTCCAAGACGCCCGCGACGAAATGAGATGAATACGAGGCTATGTCGGATTCCCGGGAAGTAAGTAAAACCCACCTCCCCCCGCACTAAACCCGCTGGTCGCAAA # Right flank : CCCTGCTGTTCCAGGCGCGCCCCCGACTCCCCCCCGACGCGCCGAGGCCCTCCCCCTGGCGGGGAAGGGCCTCGGGCCGGCCGTCGGGGCCGGGGGTGGAAGGGGGCCGTCCAGGTGGGTGGACGGCCCCCGTGCGCTGACCTACGCGCTGACGCGCAGGCGGGTTTACGCGCGGGCGAAGCGGAGGGTGACGAGCTCGAAGGGGCGCAGGGAGAGCTCGACCGTGCCGTCGGTGAAGGCGGGGCGGGTCTCGCCGAGGGGGCGCTCCAGGAGGTCGGTGAACGCCACGCCGCCGGCGGGGACGTCGACGGTGACGCGGGCCTTGGCGCGGCTGCCGGTCGACTCGTAGAGGCGGACGACGAGGTCGCCGCTCTCGTCGTCGGCGAGCTTGAGGGCGCTGACCACGACGGCGTCGTTGTCGACGGCCACCAGCGGGGCGACGTCGGCGGCACCCTGGACGCGGCGCTCGGGCAGGTTGATCCAGTGGCCCTCGGCCACCG # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCACGCGGGGATGCTCCC # Alternate repeat : GTCCTCCCCGCCCGCGCGGGGATGCTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCGCACGCGGGGATGCTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1579577-1580093 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNR01000005.1 Streptomyces yeochonensis CN732 BS72DRAFT_unitig_0_quiver.5_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1579577 29 96.6 32 ............................A TCCGGACAGTCCACACGGCGTTGACCTCAGGA 1579638 29 100.0 32 ............................. CAATGGTGTCCGGCCACAGCCCATGGTGGAGC 1579699 29 100.0 32 ............................. GCGTTCGGGACGCACGCCGTCACCGGCGACGG 1579760 29 100.0 32 ............................. GTCGCGGCCGCGATCCGCTACATCGTCAGCAG 1579821 29 100.0 32 ............................. ACCCGTGACGCCCGATGAGATCGGGGCGCTAC 1579882 29 100.0 32 ............................. GACGAAGCAAGTGCTTCGGATTTGCTGAAGCA 1579943 29 100.0 32 ............................. GCCCCCTGCGTCATGGTGTTCCAGCCGATGTG 1580004 29 100.0 32 ............................. ACCTTCACGTCTTCGGTGCCTTCCACGACGTA 1580065 29 79.3 0 ...........T.AG......G.....GA | ========== ====== ====== ====== ============================= ================================ ================== 9 29 97.3 32 GTGCTCCCCGCCCGCGCGGGGATGGCCCC # Left flank : GTGCCTGCTCGGGCTTGAGCTGCGTCGCGTGGGGAGCAGCAGGCGGATGACCTTCGGCAAACTCGGCGAGGCGGAGCTGAGCGCGTGGATGGCCGAGCACGCGCGCGTCTGCTGGGTCGAGACCAGCGAACCCTGGAAGTTGGAGGCGCGGCTCATCTCCGAGTTCGACGTCCCGCTGAACCTCGACCAGAACACCCACAACCCCTTCTACGGCGAACTGAAGAGGATCCGCGCCGAAGCCCGTGCCCGTGCCCGTGAGTTGCCCGTGAGTGCGTAGCCGCTGGGACGTGGCTTGGCCGTCCAAGGGCGCCGTGCACAGGTTTCGGACGATGCGCCGGCGCCGGGCCTTCCGGTTGCGTCATGCTGGTCCCACTGCTCGCGCAAGGTTAAGTCTCGGGGTAGGAGAGCTTGTCGAGATGCCCTTTTTGCCTCAACTGTCGGAATCTCAACTAGTAAGTAAAAACCGCTACCTGCGGCCGTAAACCCCCAGGTCGCTTCCT # Right flank : ATTCACGTCCCTGATGCAGGAGCAGTGGGGCGGCAGGGCGTGACCCGTTGCCCGTAGGTCGGGTTGAACCGGCTACCGCAGGCGCGGGCGCGCTTGTCGTGGTGAAGGGGTGCGCATGAAGCGGGTCGTTGCTCGGGTGTGGAGGCTTATTCGCGGGCCCTTGCAATGGCGGGTCCTGTGGTTCGCGCATGCCACGTTCATGGTTGGCGTGACGGGGGTGGTGCGGAACGAGCAGGGGCAGGTCCTGCTGCTCAAGCACCGGATGTGGCCGGCGGACCGGCCGTGGGGGCTGCCGACCGGGTACGCGGTCAGGAACGAGGAGTTCCCGAAGACGATCGTTCGAGAGGTCCGGGAGGAGACCGGCCTGGACGTCGTTCCGGGGCCGCTGGTCCAGGTGACCAGTGGGTACAAGCTCCGCGTGGAGATCGCCTACGAGGCACTGCATGTGGGCGGGACGCTCAAGCTGGACGGCTTCGAGATCCTGGAGGCGGGCTGGTTCA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCCGCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCCCGCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1685860-1686621 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNR01000005.1 Streptomyces yeochonensis CN732 BS72DRAFT_unitig_0_quiver.5_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1685860 29 100.0 32 ............................. TCTCGTCGGGGCCAGCCATCCACCTGCTTCAC 1685921 29 100.0 32 ............................. GTCGAGGCCGGAGAGGACATCCGGAACCTGTG 1685982 29 100.0 32 ............................. CCTAGGCGAGGGTGTCCCGCCTGGCGACGCGG 1686043 29 100.0 32 ............................. GCGTGGCGCGCCGTCCAACGCTGCAAGGAAGC 1686104 29 100.0 33 ............................. CTGAGGGTGCTCGAAGCGGCGATGCTCGGCATC 1686166 29 100.0 32 ............................. GCCCTGACCAAGCTCACGACGACCCACATGGG 1686227 29 100.0 32 ............................. GGCGAGCCTGGCCCTGATCCACGATCACTACG 1686288 29 100.0 32 ............................. GAGGTGGGCGCGCTCGCGGTAGGCGGCATCAA 1686349 29 100.0 32 ............................. GAAGGCGCAGAAGGCCGCGATGAGGGCCCCGC 1686410 29 100.0 32 ............................. CCGCACGACGGGATCGCCGTGGCGCTGCCGGG 1686471 29 100.0 32 ............................. GTGGAGTACACCAGCCGGCCGCCGTCTCGCCC 1686532 29 96.6 32 .......T..................... CCTATCCCGCAGCACGGGCCCGTGCTGGCCCT 1686593 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 13 29 99.7 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : CGATCGTGCCGTGCTCCGTGGTGGGCGCCGAGGAGACCTACCCGATGCTCGGCAACTCCCGCACCATGGCCCGCCTGCTGGGCATCCCGTACTTCCCGCTGACGCCGACCTTCCCCTGGCTCGGCCCGCTCGGCCTGATCCCGCTGCCCACGAAGTGGACCATCCAGTTCGGCGAGCCGATCCCCACGGACGGCTACGCGCCGGAGGCCGCGGACGACCCGATGCTCGTCTTCAACCTCACCGACCAGGTCCGCGAGACGATCCAGCACTCCCTGTACGAACTGCTCGTCGAGCGGCGCTCGGTGTTCTTCTGACGCCCCGCCCAGCGATGTGCCATCGGCGAGCCCCCCGCTGCGCCATGCTGGTCCCCTCACCCGATGTCCCCGCAGCCGAGCCCGAGGGAAGGGCGACCCGACGTGAGCAGTTCGCCCGAAATGCCGGAATCTCAACTAGTAAGTAAAAACCGCTCCGTGCGCCCCTAAAACCCCAGGTCACTTCCC # Right flank : CGGCGCGTACCTGCTGGACCTTCTCTGCACCAACGGGAGCGGCGGCCAGCAGGCTCTATGTGGTGGGCGTGGGCGTAGGCGCGTGGATTTCCAGGACGACAGCCGTTCCGGCGACGGTCCGGTCTTCATGCATGGCGATCGTTTGGCCGGGCTGAAGGTGACGCCACTGCGAGGGGTCGAGGGGTGCGAGTCGTACCGAGGATCGCTCGCCGGGCCCCAGGAAGGGCGTGAACTCCACCCAGAGCGCGGCGATGTTGAGGGTCGGTTCGCCGGTTGGGGTTCGGTTTCCGATGTTCCACATCGGTCGCAGGACGCCGGTTCCGGAGAAGGGCGTTTGCCTGCGGCTCTCGCTGGCCGGTCGGAGGGCGAGGTCGGCTCGGATGATGCCGTTGCGGGTTTCGTAGCAGCGCCAGTGGCACCAGGCCGCGCTCTTCTCCAACCGCATCTGCTCGGCCGCCGTGGCCAGGGTCTCCCAGAAGTTGGGCGGGAGCGGGTGGATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 2167603-2167875 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNR01000005.1 Streptomyces yeochonensis CN732 BS72DRAFT_unitig_0_quiver.5_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2167603 29 100.0 32 ............................. GGGCCGCCCACGTAGGTCGGCGACGTGGGGTC 2167664 29 100.0 32 ............................. CAAGTCCGACCCGCTTGTCCGGACCGACGACA 2167725 29 100.0 32 ............................. CTCTGGACGTCCTTCGGCTACCTCGACACCCC 2167786 29 100.0 32 ............................. CCGGAGGGGTCCAGCGGCAGAAACTCAGTACG 2167847 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 GTGCTCCCCGCGCGTGCGGGGATGGTCCC # Left flank : CGTCGATTCCCGAGAACTCACCCATGGTGCCGTCCCTCCCCAGTCGGCCACCACGCACCGTGGTCGGTGGAACCACTGCGTGTGAGATGAAGATACGTTACGGAAGGGGCCGTTGGGCGCGCATGGGGAGAAGGCGGTGCGCCTGTCCGCGATCACGCATTCCGCTTTCGTCAATTGCGCTGGAGTGACGATCGGTTCTGGCGACTTCAGCAGGCTCCGGGCGCCGCCTCCGCTTCTGTGGGGAGTTCCTCGGGCGCTCCGGTGCTCGGTGCGATCCCCGACGATGGCTCCTGCTCGCGTCCCGGAACGTCGCTGAACCTTGTGCAGGGATGTGACAGCTGAGGAGCCCCTGCTGCGCGATGCTGTTCCCATCGCTCCGCATACCCGGAGCCGAGCCAGGGGAGCGATGGTGAGAAGTGAGTCGTTTGCCCGATACGTCGGAATCTCAACGAGTAAGTAAAAACCGCTCCGTGCGACTCTAAAACCCCAGGTCAGTTCCT # Right flank : CACGCTAGGAACGTTGCTAGGAACGTTCCTAGCATCGGAGGATAGGTGCTCCCGTGGTCCCGCCCTGGTCGGGCGGGATGTCGGAGGGGTCAGCCCATGGACTTCGCGTTGTCGAGGGCTTCGCGGATGATGTCGGCGTGGCCGGCGTGCTGCGCGGTTTCGGCGATGACGTGGAGGAGGACGCGGCGGGCCGACCAGTGGGCGCCGGGCTCGAACCAGGGGGCCTTGGGCAGGGGCTGGGTGGCGTCGAGGTCGGGGAGGGAGGTGACGAGGGTGTCGGTGGTGCGGGCCACCTCGGTGTAGGCGTCGAGCACGCCGGCCAGGGTGTCACCCGGGAGCATGCGGAACTCGTCCGCGCGGCGCGCGAAGTCCTCCTCCGTCATGGCGTCGAAGTCGCCCAGCGCGGAGGGACCCTCGGTGATGAAGGCGATCCAGCCGCGTTCGGTCGACGTCACGTGCTTGATGAGCCCGCCCAGGCACAGTTCGCTCACGGTGGTGCG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 2802868-2799154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNR01000005.1 Streptomyces yeochonensis CN732 BS72DRAFT_unitig_0_quiver.5_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2802867 30 100.0 37 .............................. ACGTGACCGCCGTGGCGGGCAACGTGTGGACCGTCGT 2802800 30 100.0 37 .............................. GACAGCACCGCCAGGGGAACGAGTCCATCCTCGGGAA 2802733 30 100.0 36 .............................. ACGCGGACGCCGTGGCCCCGGCCCCGGCACGAGCAG 2802667 30 100.0 37 .............................. CACCGGAACTCGGTCCGGGAGTGGCGGCGGCCGCAGG 2802600 30 100.0 37 .............................. ATGTAGAGGGGGGCGGCGGCCAACTGATAGTAGAGGG 2802533 30 100.0 37 .............................. GGTACCGCCCGGCCGCCGTGTCCTCCTTCACGAGGTC 2802466 30 100.0 37 .............................. CGCCTGATCCAGTCGGTGAACCAGGTGAAATCCCAGT 2802399 30 100.0 37 .............................. TACACCGGACCAAGGCCTACAAGCAGATGCAGGACGC 2802332 30 100.0 37 .............................. TCGAGGGCGTCCAACCACCGACGGACCGCGTTCAGGC 2802265 30 100.0 37 .............................. CTCCGGTCCGGGCATGAAGAGAAGCCCCGCCCTCCGA 2802198 30 100.0 38 .............................. GAGCACAGGCTCCGGATCGTGCCCGTGCCGCCCCAGCT 2802130 30 100.0 37 .............................. AAGATCACGCGGGAGGGGTCGTCAACCTCCAGGAGGT 2802063 30 100.0 37 .............................. ACCGGGCACAGGTACCGGCCGCGGCCCCGGCCGGCGG 2801996 30 100.0 36 .............................. GCACGCAGCCGGGCCGGGGACGCGGCGGTCGTGGGC 2801930 30 100.0 36 .............................. AGGAGCAGCATGTCGGGGCGCCGGTTCTCGGGGTCG 2801864 30 100.0 37 .............................. TGGCCGTATTTCAAGCTCCCGAAGGGCGCGAAAGAGC 2801797 30 100.0 37 .............................. CGGGCCGCTGCGGGGCGGGGGAGACGGGCTCCGTCTC 2801730 30 100.0 37 .............................. GCGGCGATCGCGGCGCGGAGCCGGTACAGGACGTCCA 2801663 30 96.7 36 ................A............. TGGACGGCGAGGAGGCGCGGGCCTCCTACCAGCTAC 2801597 30 100.0 37 .............................. GTAGCGAGGATCACGAGCGGGTCGTCCGTGGTGACGG 2801530 30 100.0 37 .............................. GTGTCGTACGAGGCGGCCGACGTCGAGGCGCCCCCGC 2801463 30 100.0 38 .............................. CCCGTGGAGGCAGCCGGTGGATAGGTAGCGGTGCGGCT 2801395 30 100.0 37 .............................. ATCGAGCCGTCCGTGTTGGTGTGGGTGGCGGTGCTGT 2801328 30 100.0 38 .............................. CGGCCGACGACGTAGGGGGCGAGGGGGTGGCCCTCATC 2801260 30 100.0 38 .............................. TTCAAGATCAAGGGCAAGGACCTGGCCGCGCTCCTCAA 2801192 30 100.0 35 .............................. TCCACCCGCTGGAACATCAGCGGCCAGACCTGGCC 2801127 30 100.0 37 .............................. GCCGCGGCCCGGCACCCGACCTGACGCGGGACGAGCA 2801060 30 100.0 41 .............................. GCGGCCTCGGGAGCGGTCGCGCTGTCCGCGTCCTCCGCCGG 2800989 30 100.0 37 .............................. GTGATCTCGAACGGCTTCATCCCGATGGCCATCAGCG 2800922 30 100.0 36 .............................. GAGAAGTCGTCCCACGTCACGCCCCCGCCGGGGGTC 2800856 30 100.0 37 .............................. ACCCCCACGCCTACGGGCTGCGCTTCGAGTTCGCACC 2800789 30 100.0 36 .............................. GGGTCGGCTCGGGCCCGATCGGCAAGGTGTCGCCGG 2800723 30 100.0 36 .............................. AAGTACTCTCCGACGGCGCGGTCGCGGTCGTCGCGG 2800657 30 100.0 36 .............................. ACGAGGCCGTGATCCGCCCCGACGCCCCCGGCACCG 2800591 30 100.0 38 .............................. TGGCTCCTGTCCCGGCGACGCCGTGTACGGCCGCGCGA 2800523 30 100.0 37 .............................. GGGTCCTGGTGGCAGTCGGTGATCCGGGCGACGCCGA 2800456 30 100.0 37 .............................. CAGTCCTGCCCAGCGGCTGGACAAGGGGTGTGACCAG 2800389 30 100.0 35 .............................. TACGTGTACGCGCAGGTCACCCCTGGCGCCCGCGG 2800324 30 100.0 38 .............................. GTGCGGGAGACCGGGTGGTCGGAGGTGGCGCCGTACTG 2800256 30 100.0 37 .............................. GCGTCCTCGCCGGTGTGGCCCTCGCACGCGGGCTCGA 2800189 30 100.0 37 .............................. CAGACGGGGCAGACCCGGCCGTCGCCGGCGGACGCCC 2800122 30 100.0 38 .............................. TGCGTTCAGGACCGGGTAACGCCGGACGGGCAAAGCCA 2800054 30 100.0 36 .............................. GCCTCGGGCGGAACCTCGTCCACGCGTCCTCGTCTC 2799988 30 100.0 38 .............................. GTGCTGCAGCCCGGGGGCGGTGTGGTCGAGCTGACCGT 2799920 30 100.0 37 .............................. CAGTCCAGCGGCACCACGGTGAAGCGGTAGGCGCCCC 2799853 30 100.0 36 .............................. ACGGTGGGCGCCGGGTCGGTGCTGCTCATGCTGTCT 2799787 30 100.0 37 .............................. CCCATGGCCACCGGGGCGGGCAGCATGCCGTCCGCCA 2799720 30 100.0 37 .............................. CAGATCTTCTTCATGGTCACAGGTGGAAGTGTTTGGC 2799653 30 100.0 36 .............................. TGGCAGCGGGGAGCTGACCGAAGTGACCGATCAGAC 2799587 30 100.0 38 .............................. ACGGCACGGCCACCCTTACCGTGCGGCTGCACGACGCT 2799519 30 100.0 38 .............................. ACCACGGGCAGGTGGATGTGCTGGTGGTCCACCTCCAC 2799451 30 100.0 35 .............................. ACGCCGCGGAAACTCTCCTCGCCCGCGCGGACGAG 2799386 30 93.3 37 .C.................A.......... AGATGCCCTGCACGCTGCCACCCGGTCACGACCACGG 2799319 30 100.0 38 .............................. TACTCCCGCACGCTGGCCGGCGCGCAGTGGATGGACGG 2799251 30 96.7 37 .............................T GCGTAGGTGACCAGGATGTTGTAGAGCGTCCGAACGT 2799184 30 73.3 0 ......T................GGCGGGG | C [2799157] ========== ====== ====== ====== ============================== ========================================= ================== 56 30 99.3 37 GTCCTCATCGCCCCCAGCGGGGGTCACAAC # Left flank : TGGCCCGCAACGTCGCCTACGACGAACTCCTCTACCTCGACGCCCTCGCCCTGACCCGGCACTGCCTCGAAGGCACCCCCTACAAGCCCTTCCGGATCTGGTGGTAGCCGAACCGTGTACGTCGTTGTCGTCTACGACACCCTCGCCGCACGCAACCCCAAGATCCTCCGCACCTGCCGCAAGTACCTCCACCACGTCCAACGCAGCGTCTTCGAAGGCCACCTCAGCGACGCCCAACTCCGCCGCTTCCACAACGCCGTCGAAACCGTCCTCGACCTCGCCTACGACAGCGTCCTCGTCTACACCTTCCCACCCGGAGCCGTCCCCCAACGCCTCGAATGGGGCGCGGTGGAACCCGCACCCACCGACGTCCTCTGACCTCCCCCACCACCACGTTTTTCAGCGCCACGCCGGGTCCAGCCGCACAACCGGAGACCCGCTGCAAAACCACCCCCGGACGCGGGAGACTTCCCCTCGGCCACCTGCGGCTTTACCGTGGG # Right flank : GATGACACCGCCAGGGGGTCAGGAGGGCGCCGTGGCGGAGGCTCACCGCGATGTGTGCGAGAGCAGCATCCCGTTTGCCCAGGTAGTCGCGTACGCGAGCCAGCCCCGTGCCACCGCCGAGCCACCGCCGAACCGGTGCGGCCCGCGGCGCCGGAGCGGCTCATGCCGAGGTCGAAGATTTCTCTGTTCGATTCGAGGTGCTCCGGCCAGGGCGTAACTCCAGGCAGTACGGGGAGGGCCGCGGCCGGGCCATCGCACATGCCGGACCACCTGGCCGGCAGTGGCACAGCACCGGCGGGTGAGTGGTCCGGCGGTGGCACGGGGGCTTGGGAGGGGTGACGGCGGAAGTTGTCCACGCCGCCACAGGAGATGCGATGTACCACCCTCGCCAGGCCCACCGCCCCGCCGTCGCCCGTCCGCAGAGCGCCCTTCGCTCTCCCCTCGCGGAGCTGGAGCAGGCGTTCCTCGCGCTCGCCCACGGCGTGGAGCCGCTCACATTC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCCAGCGGGGGTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.90,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 6 4594845-4592800 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNR01000005.1 Streptomyces yeochonensis CN732 BS72DRAFT_unitig_0_quiver.5_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 4594844 30 96.7 31 .............................T GCTGATGCTCACTGGGGAGGTCCCTTCGGGT 4594783 30 96.7 31 .............................G TGTTGCACGATACCCCTCTTCCTGCACGGAC 4594722 30 96.7 31 ............................T. GCCCGAGCCCGAGGACCAGGGCCCGGACGTA 4594661 30 100.0 31 .............................. GCGTCGAGCGCGTTCCAGAGCCGCTCGTGGT 4594600 30 93.3 31 ............................AT GACGCCACGCCGCCACGGCGCCATGACGTCA 4594539 30 96.7 32 ............................C. ACCGTGTTGGAGTTCACCGACGCCGAGATCCG 4594477 30 100.0 31 .............................. CGTGGAGGGAACCGAGCTGCAGCTCGACGCG 4594416 30 96.7 31 ............................T. CTCCGTGTAGAGGCTCACGGAGGGGATGCCG 4594355 30 93.3 31 ............................TG GCGGTGGCCCCCGACCAGGACGCGTTGAACG 4594294 30 93.3 31 ............................AT CGGGGGTGTGGACCCGAAAATCGTGGAAGCG 4594233 30 100.0 31 .............................. TGGCCAGGAGGAGGGCGGTGGGCTGCATCAC 4594172 30 96.7 31 ............................C. TTCCCTCGTGTCTGGAAGGTGTGCCGCCGTC 4594111 30 93.3 31 ............................CT CGCCGGGATCGGTGGCGAAGAACACGTCGGC 4594050 30 96.7 31 ............................C. CGAGAGGACCATCACCCACATGACCATCACC 4593989 30 100.0 31 .............................. GGGGTACTACAACCAGAACGTCGTGTTCAAG 4593928 30 96.7 31 .............................T GCCAGGCTCGCAGGTCGAGTTCGGCGGCGCG 4593867 30 96.7 31 .............................T TGCGGTGCCGGATGACTCCGAGGTCGAACAT 4593806 30 96.7 31 .............................T ACGTGCAGGGCTACACCTACCGGTGCCCCTA 4593745 30 96.7 31 ............................C. CGCCGACCGCTCCGGACTCGGAGAACGCCGG 4593684 30 96.7 31 .............................A TCACGTGGGGCGACGACGAGCGCAAGCAGGC 4593623 30 93.3 32 ............................CG CGACGCCGCCCCGTGCGGATATCCGCACGCTG 4593561 30 96.7 31 .............................G ACTTCACCGCGTCCTTCTCGCCCGGTTTCAC 4593500 30 100.0 31 .............................. TGGACACGTCTATGCCGCGGCTGGTCGCCGC 4593439 30 96.7 31 ............................T. ACTGGCTTACCCCCGACACGGCCGTCACCTG 4593378 30 96.7 31 .............................T TGCCGGGAATCGCCATTCTCACCACCCCCCG 4593317 30 96.7 31 ............................C. CGAGAGGAGCATCACCCACATGACCATCACC 4593256 30 100.0 31 .............................. TGGGCCGCCCGACCCGCAAGCACGGCGTGAA 4593195 30 96.7 31 ............................A. TCCCTGAGCTGCAGATTGACCAGTTTGGCTA 4593134 30 96.7 31 ............................C. CGGGGCAGGGGCGGGTGGTGCGGGTGGTGCC 4593073 30 93.3 31 ............................CT GCCATCCGGCGGCGACGGAGTCGGCGTGCTG 4593012 30 93.3 31 ............................TG GAACATCTCCTCGGGCTCTGCGTCGACCGCC 4592951 30 93.3 31 ............................TG GTAGCCGGCCTCAGCGAAGGCGCGTGGGGTT 4592890 30 93.3 31 .......................C....T. TCCGGCACCGCGGCCGTTCGCGGTCCGGTGT 4592829 30 70.0 0 ...........G.TT......A.CT.GAA. | ========== ====== ====== ====== ============================== ================================ ================== 34 30 95.6 31 GTCGTCCCCGCACGCGCGGGGGTGGTCCGC # Left flank : CCAACCGCCCCCACGTCAGCCCGGCCGCCAGCACCGGCGCCGCCTCGGCGGGATCCATCGCCTGGAACGCCGGACACGCCTTCCCGCAGTCATGGATCCCGCACACCCACATCAGCCACGCCCGCCCGCGCCCACCGCTGATCTCGTCCAGCCGCCGCCGGAACGACGGCGCCAGGTACCGGTCCCACATCACTCCGGCCACCGCAGCTGTGTCCAGCAGATGACCGATCAGCAGGTGCGTCCTGCCCCCGTTGCGCGCAGCCGACTTCCCCCACAACCGCCCCACCCGCAGGGCCGTCTCCTCGGGCACACCCCATAACCGCATGAGCCGGACGACCGACCGTTCCTCCACCACGTTCCCCAACTCCCCAACCAGCGTGCGTACAGTGGACCTGACCCTAGGTGACACCACTGACACAGCCCCCGGACGCGGAAGCATGACACCGAAGCAGGTGAACGAAAACCGGCACCCGCGCTAGCATCGCCGCAGGTCACGAAGT # Right flank : CCGAGCGGGAGGGGATCAGTGGAGGTAGGTGCCGAATCGGGCCAGGTGTGAGGGGACGTCGGTGCCGGCGGGCCGAAGGCCCAGGAGCCGGTGGCCGTGGGGCCGTTGGCGGTGCCGGGGAGGTCCCACACAGCGCCGGTGCTGGAGTTCTCTCCGTCCGCGGTGGCGTAGAAGTCGGGGTGGCCGGACTTCCTGGTGTCCAGCAGCCGGACCTGGTCGCCGAAGTGGTCGCCGGTCTCGGCGGCGCCGGGCACGTCCTTGGTGTGCTGGGTGAACGTCACGGCTCCGGTGCCGGTGAGGCCCCGGGCGGAGCCGTTCATCAGGATTACCGCGCCCGCGTCCCAGATGTCGCCCAGCGCCTCGCCGGACACCCCGACGGCCACGTCGGCGTACCCGTCGCCGTTGGTGTCGGCCACGTCGAGCGACATGCCGAAGTAGTCCTCCGACTCGTTCACGCCCGGTACCCCGGGGGAGTTCTGGTCGAGGGTGGTCTGCCCGGT # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.23, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGCGCGGGGGTGGTCCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 7 4605444-4605965 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNR01000005.1 Streptomyces yeochonensis CN732 BS72DRAFT_unitig_0_quiver.5_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4605444 29 93.1 32 .........................T..A GCCGCGGACTCGTCCCACTCCGGCGGGCAGAC 4605505 29 93.1 32 .........................T..C CGCCCCTGTAGCGGGCACGAACCACCCCCCGA 4605566 29 93.1 32 .........................T..T CGGGGTGCTGCTGCTGGCCGATTTGCATGAGC 4605627 29 93.1 33 .........................T..C GCCGGTACAGTGGGGACCGCTGAGCCCACCTGG 4605689 29 100.0 33 ............................. ATGATCAGGAGGTCCGTACTGGTCGGCTCCGGG 4605751 29 100.0 32 ............................. GTGGACCCCAGGTAGACGACGCTCGGGCCGCG 4605812 29 96.6 33 ............................A TCGAACCCTGTACCGGGGGTGGCAGCAGTGCCC 4605874 29 100.0 33 ............................. TCCTACGGGCACCAGACGGTCAAGACGGTGACC 4605936 29 89.7 0 C.................T.........A | T [4605961] ========== ====== ====== ====== ============================= ================================= ================== 9 29 95.4 33 GTCCTCCCCGCGCCCGCGGGGGTAGCCCG # Left flank : AGCGGCGGCCGCAACTGGGGCGAAGCCTTTGCCCCGGGCGAGCACCTCACGGTGATTCCGCCCCAGCCGGAGCCCCAGCAGTCCCCACCGGAGGCGGAAGGCGCCGGCCCGGAACAGGACCGGCAACGGTGAGCGCCGCAACAACCGTCGTCGTACTGATCGCCGCTCCACCCGGCCTGCGAGGCCACCTCACGCGGTGGTTCGCCGAAGTAGCCCCCGGGGTCTTCGTGGGCACCCCCAACTCCCGCATCCGCGACCGCCTCTGGACCATCCTGGCCGAACGCATCCGTGACGGCCAGGCCGTGATGGTCGAACCCGCCCCCACCGAACAAGGCTGGACCGTCCGCACAGCGGGCCGAGACCGCTGGACGCCCGTCGACTTCGACGGCCTCACCCTGATGGCCCGCCCCCGGGGTAGCTCAGCGGCACCGGGCTGGCAGCCGACGCGGCAAGTGAAGGAAAACCCGTGATCCCCGGGACATCAGCCCAGCTCACGAAGT # Right flank : AGTCAGCCGGGTACGGCGGTGGGACACGAAGACCTCCATGCGGTGTGGGCCTGGGCAGCTCCACCGCATGGAGGTCTTCGCCGTGATCAAGTGCTGACGGCGTCAACAACGCTCGTGGTCAGTACGGTTAGTCGCCTCCGCCTCCGGAGCCGCCACCGGAGCCGCCGCCGTCACCTCCGCCGGAGCCCCCGCCGTCGCCGCCGCTGCCTGAGCCGCCGTCTCCGCTGCCGCCGCCGTACCCGCCGGAGCCGTCACCGCCTCCGCCGTAACCACCGTCGCCTCCGCCGTAACCGCCGTAGCCGCTGTCGCCGCCGTAACCTCCGTCGGAGGAGCCGCCGTACCCGCTGTCACCCCCGCCGTAGCCGTCGCCTCCGCCGTAGCTGCCGTCGGAGGAGCCGCCGTCGTCGCCGGAAGCCGCGGCGCTGCCGTCATCGCCCGAGTCCGACGCGGCGGCCGAGTCCGTGCCGTCGTCGCCGGGTGCGGACGCGGCGGCCGCATCC # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCCCGCGGGGGTAGCCCG # Alternate repeat : GTCCTCCCCGCGCCCGCGGGGGTAGTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCGCCCGCGGGGGTCAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //