Array 1 331123-334057 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNWN01000006.1 Sneathiella chinensis strain LMG23452 contig6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 331123 36 100.0 30 .................................... TACGTTAAGCATCGGGACCTGAATAATCGT 331189 36 100.0 30 .................................... CTGGGTGGAGGCCACTCTGGATATGAAGTG 331255 36 100.0 30 .................................... ATATATGACGACCATTTCAGGGCGTCCAGA 331321 36 100.0 30 .................................... ATTTGCGCTGCGCATATCAACAATAGCAAC 331387 36 100.0 30 .................................... CTTCGGCTTCTTTGGCCTCCCAGTGCTTCG 331453 36 100.0 30 .................................... TTAAAGAGCAAGCTAATAATGTTCGGGCAA 331519 36 100.0 30 .................................... GATATATTCATGAAATTGCAAGCACCTTTG 331585 36 100.0 29 .................................... GCGCCGCATCACCTGATAAAACGCTTTTT 331650 36 100.0 30 .................................... TCCACATTGTAATCAGCCATTATTCACCGT 331716 36 100.0 30 .................................... GGAAACGACTGAGTATATGCCAAGGGAGAC 331782 36 100.0 30 .................................... AACACCACGGTCGGGAATGTGGATAGCGGC 331848 36 100.0 30 .................................... ATGCCAGCGATTGTTCCACCCATTCATCCG 331914 36 100.0 30 .................................... GGGGATGCTGGTTCTTGGCCTGCCGCCGGG 331980 36 100.0 30 .................................... GAAGGGGATTTCTGTGTTTCGTCCTCCCCG 332046 36 100.0 30 .................................... TGGTCCCGCTTGGCATGGCGGAACATGACG 332112 36 100.0 30 .................................... GTGATTGGCAAGCAACAGAAACCCACACCG 332178 36 100.0 30 .................................... TGGTCTCGGCCCCTTTTTCCGCCTGATCGC 332244 36 100.0 30 .................................... TGGCCAGCGATACCGTCACCAATAACGACC 332310 36 100.0 30 .................................... ACCAGAGGAATGGTTCAGCACCTTCTCGAT 332376 36 100.0 30 .................................... GTACCCGGTGTTTTTTTGTTTTTTTTGCCG 332442 36 100.0 30 .................................... TTGCCGCCGCCACCGCCCTGGGGGACCACG 332508 36 100.0 30 .................................... CCCTGAGCCGACCGGCGCCAAGGCTCGGCA 332574 36 100.0 30 .................................... TCTTTTATGTCGGCGTGGGCGAAAACGAGG 332640 36 100.0 30 .................................... TAATCGCCGCCCAGAAAGGTCTGGGTCGCC 332706 36 100.0 30 .................................... ATCCATTGACGGAGAAAAAAATGGCTTTCG 332772 36 100.0 30 .................................... CCACAAAGCACACGGCCCCGAGATTACGAA 332838 36 100.0 30 .................................... AAGCGGAAATCGACGGTTTGCCTTTGGCAA 332904 36 100.0 30 .................................... GCATTGGCCCCGCTGGTAAAGGTCAACAGG 332970 36 100.0 29 .................................... AAACAGCTATATTGCCAAAAAAATGTAAA 333035 36 100.0 30 .................................... TGTGGATCAGGAGCGCAAAATGGAAGCTTC 333101 36 100.0 30 .................................... CCATATTTTATTTTTAGTGATTGACGACAC 333167 36 100.0 30 .................................... GCACTTCGCGTCCCGGACTGTCTGTCCGTA 333233 36 100.0 30 .................................... TTCAAAACCTCTTTTTCACTCAAAACAGCC 333299 36 100.0 30 .................................... GCTCGACACCTTGCCCATTATCGCCGTTAA 333365 36 100.0 29 .................................... GACGACTACCGTCATTTTAGACCTTCTCC 333430 36 100.0 30 .................................... TGATGGAGGTCAGGGATCCACGAATAGTCG 333496 36 100.0 30 .................................... GCCGTCGCCGTATTCATATTACCCGGCCCG 333562 36 100.0 30 .................................... TTACGCATTCGGTGCTTACTAGCGCTTGGC 333628 36 100.0 30 .................................... TATATAAGGTCCAACTTGAGATAGATATCA 333694 36 100.0 30 .................................... TCCGTCTCCTGTTCAATGGTCAGCTTTCGC 333760 36 100.0 30 .................................... AGAAATACAGGGCGGCCCCTTCCGGGTATC 333826 36 100.0 29 .................................... CGGCGGTGTCAAAACACACAAAAAGACCC 333891 36 100.0 30 .................................... ACGGGGAATGTACTTGTGCTGCTCCAGAGA 333957 36 100.0 29 .................................... CCGACAGCGATGAATTCAGACACTGACAT 334022 36 86.1 0 .............................GGT.T.G | ========== ====== ====== ====== ==================================== ============================== ================== 45 36 99.7 30 ATTATAGCATTCTAGAAATCGGCGCCAAGCCGCAAC # Left flank : TCCGCTCCCTTGTCTCCTCGTTGGAGGCGGGGCAGGTCTCTCTGGTCGTCCCCGAATTCGGGTTCCGGCTGGAGGCAACATGATCAAGCGACTTTCGGGATACAGGTTCATGTGGATGATGGTTTTGTTCGATCTTCCGACCGGCACGAAAAAAGAGCGGAAGAGAGCCCATGGTTTCAGAATGTTTCTCTTGGATCAGGGATTTGAAATGTCCCAGTTTTCAGTCTATGTGCGGTTTGTCGGGGATCGGAGCAACACCAAGCCCTTCGCCCGGAAGATAGAGGCAGCCGCGCCAGCCAATGGCAAGGTTTCCATCCTCATGTTCACAGACAAGCAGTTTTCTGATATTATCAATATTCGAAACAGGGAGAAAAGCAAACCGGCATCAGAGCCGGAACAAATCCTGCTTTTCTGATGGGAACAAGATGCGAACACAGCCTCGATTTGATGTGAAGAAGACCGGATTATCCACGATATTTCAAATGGATAACCCGGTTTCT # Right flank : GTGGGGGGGGGCTTTTATCAGTTTATTTTAATGGAAGGGTGTGTCAGGGTAGCGGCTGTGGTGCGGAGACTACGGTGAAATTCGACCCGCCGAAGCACGAAGGCATTTAGCTGACGGAGCGAATGGGTTTTATAGGTCGGCCCCGCCGTACCACACTCTGGCAGTTGTGGTCCTTACTTGGGGGACCGGAAAAATCACAAAAAAAGGGCCGCTTTTCAGGGCGGCCCTTTTCAGTTTTGGATGCGAGCCTTAGAGGCTGAAATACATATCGAACTCGACCGGGTGCGGGGCGTGTTCGAAGCGGTAAACCTCTTCCCACTTCATTTCAATATAGGCGTCGATCATGTCTTCGGTGAAGACGCCGCCCTTGGTCAGGAAGTCCCGATCTGCATTGAGGGATTCCAGAGCTTCGCGGAGAGAGCCGGCGACGGTCGGGATGTCGCGCAGTTCTTCTGCCGGCAGGTCGTACAGATCCTTGTCCATGGCATCGCCCGGATGGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAGCATTCTAGAAATCGGCGCCAAGCCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //