Array 1 28400-24089 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYDR01000145.1 Planctopirus hydrillae strain JC280 Contig69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 28399 36 100.0 40 .................................... AAGCATCCTGATATCGCCGCACTGATCCAAGCACAGCGGG 28323 36 100.0 38 .................................... TGAACAAGTTTTGGCCGAAGCAAACAAGCTCGCCAAGC 28249 36 100.0 38 .................................... AAGTATTCGCTGCAAGTCTCGGAAAGCGAGCGGATCAG 28175 36 100.0 37 .................................... CAGACTCAGAAATAGGGACAGGTACGGAGAAAAGTTT 28102 36 100.0 37 .................................... CAGTTTGCGGATCGTCGTGGCGAAGTCGAATGTCGAG 28029 36 100.0 40 .................................... CAGCAGTACAGCAGTGGTTGCAGTCCACGAATCGTGCTGT 27953 36 100.0 36 .................................... TCTTGGCCGTCAGGGATGCCGTTGTTGTTACAGTCC 27881 36 100.0 37 .................................... CGTTTTGCCATCGCCGATACTCATTCCATCAGACCTG 27808 36 100.0 40 .................................... GTGGCAATGAGCGTGTTATCTGCGGGCACGATCTTCGCGA 27732 36 100.0 41 .................................... CTCCCACGCCATCTCAAATTTCCCTCGCGGCGGTGTAACCA 27655 36 100.0 41 .................................... TGGGTTCCGCCAAGCCACATGGTTTATTGGTACACCCGCCG 27578 36 100.0 38 .................................... TAGCCGCGATTCAGAAAGAAGAGTTAAAGAAGAATAGC 27504 36 100.0 35 .................................... TCGGTTCCCCTGGTCGGGTTCAATTTCTCGATCGA 27433 36 100.0 40 .................................... GGTCGTGCGGCGGAATGCGGCAGTGATCCTGCAGGCGGAG 27357 36 100.0 35 .................................... TAGTCTGGCTTTCGTACATGGGTCGAGAACACGCC 27286 36 100.0 37 .................................... GCTACTACCACGCCACAAAACGTAAGCGTCACCACCA 27213 36 100.0 36 .................................... AGAGGGGCTGTTAAGTAAATGAGCGAGCAGTTTACG 27141 36 100.0 37 .................................... ATGCCTACATGGTTTCCAATTTCAACGCATCCGAGGC 27068 36 100.0 38 .................................... AAGTATGGGTCGATCAGCTTCAAGGCCCAGAAGACGAA 26994 36 100.0 36 .................................... TCGCTCCACGGCTGCTGTCCAATCGCTACAGACAAA 26922 36 100.0 38 .................................... GCCGACACAAGATCGACAGCCGTTGAGCCGCTGCCCTC 26848 36 100.0 37 .................................... GAGGCGGTCGCGGTCGTAAGTTTTCCAACACGCTTAA 26775 36 100.0 38 .................................... TTTTGGCACGCAATGGCAGGCGTCAGCCCGTCACTGGA 26701 36 100.0 38 .................................... AGTAACCAGCGATTGATAGTGTAGCTGAGTCGTGTCTC 26627 36 100.0 36 .................................... GTGCATCCGATCTGACTGCTGACACCTCAATGGCGA 26555 36 100.0 36 .................................... AATCAATCAGCGAAGGATCCAAGCGACCGAGGCGGG 26483 36 100.0 39 .................................... AGTTGTGGTCGAACTTTGTGCTTTTCGCATAATAATGTT 26408 36 100.0 38 .................................... TTGTTCGTCGTGGAGAAGAACGCAGCGGCATTCGACAG 26334 36 100.0 37 .................................... GAGTCATTCACAGTGACCCCTGATGCCAGTGGTCAAC 26261 36 100.0 42 .................................... TATGACTGGCTCTGCAAGACGTGGCCAGAAGGGACGGATGTC 26183 36 100.0 39 .................................... AACAGTATCTGGACGACGTGGATAGGTTTACACCAAGTC 26108 36 100.0 37 .................................... TAGCTGGGGCAGGAATTGCTTCTCCGTCTTCCACGTC 26035 36 100.0 37 .................................... CCGTCTGCCATCAAGGCCACTTCGACGGTTTGCTCAG 25962 36 100.0 40 .................................... TGGCCGATCAATCGATTGGGCGAGCAGGAGTGGGACGCAC 25886 36 100.0 38 .................................... CAGATCGACCGTTACGACATAGGCACTGCGTCCCGTCC 25812 36 100.0 37 .................................... GGTATCTTCACTGTTCTCATTTCGTCACTAGTGCCTG 25739 36 100.0 36 .................................... CAGAGCGAGCTTGAAACGTCGCAGCGGAGCTTTCTG 25667 36 100.0 36 .................................... GTCAGAATGTCTTTGAGCGTGTCAATCCCTGCCATG 25595 36 100.0 36 .................................... CAGCATTCCACATCAACGGTGCATGTCCCGTCAGAA 25523 36 100.0 38 .................................... GTAGCAACCGTGGCGTCCATGCCGCGACGCAAGCCACC 25449 36 100.0 37 .................................... GCAATCTCCGCCGCGATCTTTGCCGCCAACTCGGGCG 25376 36 100.0 36 .................................... GTGTCTTCTACCCAGGCAGCGGCGGCCCATACTCCT 25304 36 100.0 37 .................................... TTGCGGGCCAACCGATGTATGCGGTGGCAATTCTGGC 25231 36 100.0 36 .................................... ACCGTACGCTGACGATTACCAGCCGTTACTTCGCTT 25159 36 100.0 37 .................................... CCGGAGACTCTCATCAACAGAAACATGGCTTGCCCGC 25086 36 100.0 38 .................................... CCGCTGCATTTGTGCAAGCATCAACTTGATTTCGGCGG 25012 36 100.0 39 .................................... GATCTGATGCAGCATCGTTTCGACGCCGAAATTGGGCGG 24937 36 100.0 39 .................................... GCACCGTTGACGAGTTGATCGAACACCAGGGCATTGATC 24862 36 100.0 38 .................................... TCGAGGAGTTTTAAGCCACGAGTTGCAAGCTGAAAGTC 24788 36 100.0 36 .................................... AACGGCTTGCTCGTTGCAATACCCACGGTGCAGACG 24716 36 100.0 38 .................................... TGATAGCCATGAGGTGTGAATTCACGCTTCCCGATGGC 24642 36 100.0 37 .................................... AACGCACTGGAGAGCTTTAAAAAGCCTCAGTATCTGG 24569 36 100.0 39 .................................... GACCAAGTGCGTGTGTGGTGCCTGTTTTGATCGTAAGCC 24494 36 100.0 38 .................................... GATTCCCGTGGAGGCACCTCCACCACCGGCGAAGTTGT 24420 36 100.0 39 .................................... TCGACTCTCACCCCCTGTCGACAACTGCACTTTGAACTG 24345 36 100.0 38 .................................... AATCAAGTCGTTCGCAGCACTGAAGGCGAAGTCATCAA 24271 36 100.0 37 .................................... CAGTGTGACGCCGCTCGCAGTTGGGACAAGTTATCGG 24198 36 100.0 38 .................................... GTCATGTGCCCGCCGCATCTCGTGGAGAAGTGGAAGCG 24124 36 97.2 0 .................................T.. | ========== ====== ====== ====== ==================================== ========================================== ================== 59 36 100.0 38 GTCTTCCGCGCTAACCAAGCGCGGCCCCATTGAAGC # Left flank : CCTTCCGTGGCTGGGGCTCACGCGGACCGAAGCCTTTTGCTTTGGATCGAATCCACTGGACAGGCAAGACACATCATAACGAATATCTTAAGCCCGCTAGAAATGCCACCTCTCGAAACAGGCCTCTTAAAGTCTTTCTACTCCGCAACTTGGAACGCGGGC # Right flank : CGGCCAACGTTCAACCGTGTGATGATTCCCCAGTGGGCCCAGCTCACCATGCAGGGAGCACGCTTCGAGTCCGCCTGGATCGGTGACACCAAACGGCAGCGATTGCATGAAGCACTGCTGGGCATGGTCTACCAGTTGAACGAGGCGGAACTGCCCCCTTCATTCCACGTCGATCTGTCCCCGGCCATGCAGGAGCACATCCGGGAGTTCCTCCGCTCACGAGAGGTGGGTGTGTGGTCTCAGGTCGGAGCGACCGTTCACGACCGGCTGAGGCGAGCACTGCAGCGGGCGCTGAAGGACGGCGACAACCCTGTCCAGATGCGAAAGCGAGTCAATGAAGTCCTGACCAATGCCGAGAAGTACCAGGCGGCCCGAATTGCCCGCACAGAGACGACTGGGGCAATGAATCACGGGCAGCAGCTCGAGCGGGAAGACATCGGCATTGAACGAAAGGAGTGGGTGAGCACGCTCGACATCAAGACTCGTGGCAGCCAGCCCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCGCGCTAACCAAGCGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.30,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //