Array 1 731477-733091 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPSS01000001.1 Corynebacterium ulcerans strain 2590 Contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 731477 29 100.0 32 ............................. CTACCATAAAACCGTGTAAAAACATAGTTTAA 731538 29 100.0 32 ............................. CGCAGGCTCTGCCAGAGCAGCCGGTACTGTGA 731599 29 100.0 32 ............................. GCGGTTCGTCACCGATTCCGCGCTATTCGCCG 731660 29 100.0 32 ............................. AAGTACTGCCCGACAACGTCCGTTTGCTGGCC 731721 29 100.0 32 ............................. CTGGGCAATCGTGCGGTGGGTGCGGTCCTGGA 731782 29 100.0 32 ............................. GGTTTGACCTGCGAGGTTGACATCTGCCAAAG 731843 29 100.0 32 ............................. CACATGAAAGGATTAGCTTCGTAGCTCAATGG 731904 29 100.0 32 ............................. GTCAATAGCGCCCTTGGTCGTATCACCAATAC 731965 29 100.0 32 ............................. GGTTTCACGGTCAAAGATGTCTTTTGCATTTC 732026 29 100.0 33 ............................. TCGTGATGTGTGAAAATTGAAAATCTGGTTTGA 732088 29 100.0 32 ............................. GGTTGAGAAGTCCAAGAAGAAGGGCTGGGGCT 732149 29 100.0 32 ............................. AAATGGGGATCTTTAACCGCGAATATGAGTTC 732210 29 100.0 32 ............................. TGGTGTATCACGGAAACAAGCTCGTGAGGCTG 732271 29 100.0 32 ............................. GACGCAACCGCTTGTGAAGCCTATGACTGGGT 732332 29 100.0 32 ............................. GTGTGATCCGATTGCATCCCGCAAGGAATACA 732393 29 100.0 32 ............................. TCCACCTCGGTTCCTGCTGGTGGTGCGGCGAT 732454 29 100.0 32 ............................. GAAGCTTAGCCTCCTGGGAATTGCCGCCCACC 732515 29 100.0 32 ............................. GATGGAAAGCACCATTTAAGCACCACCAAATC 732576 29 100.0 32 ............................. AGGTTGCATGGCAAGGACTGCGGTTGCCCTAG 732637 29 96.6 32 ............................G GGAAGAGTGCGTATAAAGGACGCAAATACGGA 732698 29 100.0 32 ............................. CTGCACGTGTGGCGTTGTGTCTATTTCGGCAT 732759 29 100.0 32 ............................. AAGTACTGCCCGACAACGTCCGTTTGCTGGCC 732820 29 100.0 32 ............................. GGCCGGGGTGTTCTGGTCGTGGGTTTTGGGTA 732881 29 100.0 32 ............................. GGAGATTTCTCCGAAAGTGCCAGGTTCTAAGG 732942 29 100.0 32 ............................. AGTCCAGTCGCTACAGTTCAGACAACCACGGC 733003 29 100.0 31 ............................. TGGGCTGATGAAAGCAGGTCCGGCTGCCAAA 733063 29 82.8 0 .CC.........C......G........A | ========== ====== ====== ====== ============================= ================================= ================== 27 29 99.2 32 CTTTTCTCCGCGTATGCGGAGGTAGTTCC # Left flank : CGCGAACACCGCCAACCCCAGAAACCCTCGAAACTGCGACTGTTCAACATCAAGGATCTGTACACCGTTGGCAGCTAACACACGGAAAGCTGCTGCCGACACTCCCTGTCGATCCTGGCCTGAAATAGTAATAACAGCCGGGGTCAGCTCTGGGCGAAGGCTAACAGTTACTTGAGGCTGGTCCAGTTCAATCACCGATCTATTGTCGCACGAAGCCTTTCAAATCCTCCCAGTGCTCCCCTATTTAGGAATGACGGGCTCCGCATCAACGAATGCGCACTTGCGCTTCATCCTATGGGGCAAATTATCTTATCTTTTGATTTTGCGATTTTATGTCTTCTCCTGGATATTGCGAGGGTGGTTAGTAGATCTTCCCGCTTTTGTCATGGTCTAATAAGGAAGGCTAGTTTTTCGCACCTATTGTATGGAGTTAATGTGCTGATTCCAGACGCAGTTTGGACTGTTTTTGACTTCTTTGGTGAGTAAACGCGCAGGTAAGT # Right flank : ATAGCTTGACACTTGCTAGATATATAGTTTGTGTCCACCACTACGGAGGTATAAATGTCCATCACACCAGAACGGGTTATGCAGCTTTTAGGTGAAGGTATGACCCAATCCCAGATCGCTAGGAAATACGGGGTTACTCGTCAATACATCTTTACTCTTGCCAAAAGGGGAGGGCATCAGGCCTCTGCGCAAGAGTACATCAAAGATGATTTACCGTGGGCAAACGTCCCTGACAAGCATTTTAATAACACGATACTTTCAGGTTTGAGGATCCACGCCCGTTATATGGAGCGTGGGCAAGAGGGCTTGCGCGGTTCGAGTTGCGTTAAACTACTCGGCATGTACCGAAAACTCGTTCGATTCAATCAGGTTATCGACTACGACGAGTCCTATCCACCTGTAGAAGGTTTGTCGAATACAGGCGGGTTTATGTATGTACCGAGGTCTCCAGAGGACGGGAACCTCATTATCAAAATGAAGCCCGGTGTGCGGATCACAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCTCCGCGTATGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 148108-148258 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPSS01000004.1 Corynebacterium ulcerans strain 2590 Contig4, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 148108 29 100.0 32 ............................. ATCCATTAAGCTATACGAGTAGCCCTGAACTG 148169 29 100.0 32 ............................. TTTACGAGCGGCCTGATTACCCCAGTGCGATC 148230 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 CTTTTCTCCGCGTACGCGGAGGTAGTTCC # Left flank : ACATTATGATGGAGATCCTCACTCCACATCTCCCCGAGCGTACCGACGACCGCCTCATCGGCGGAAGAAACCACGAAGTCCCAGGGCACACACAATACGGTGGTAAATAAATGTTTGCGGTCATCCAAGGACATAACCTTCCGAACCACCTCAACGGCTACCTCAGTCGCTTCCTTTCCGAAGTAGACGCAGGTCTTTATGTAGGAGTTCTGTCCAGAGCCGTCATGGAAAACCTTTGGGAAAAATGCCAATCCGTAGACCTAGCAGGATCTCTTACTCTGATTCACCCACAATATGATGCTGAGCAAGGGTTCAGAATCCGCACAACAGGAAAACAACGGCGCCCCGTCGTTGATCTTGATGGTCTTTTCCTCTCTGCTCGTGGTCTAATAGAAGACGTGCGTTTTGCTGACCCTCTGGATGAAGCCGATGCAATTATTCCAGACGAAGTTTTGGAGGATTTTTGCCCAGAGAGTGAGTAAACGCGCAGGTTATTTAGC # Right flank : CCCCTCATCTACTCCATATCTGGATGCATCTCTACGAAAACGGGCACATCTCAGAACATCAAAACCTCACTCGCTAAGCGAAAGGAATAAACCGTGTCATTCACCAACACGCCACCCCCTCACACCCCACAAGCCCCACAGCCAGAAAAGCCTTTATTACGTCAATGGTGGTTCTGGGCGACCATAGCCGGAACAATGGTTGTAGCCGTTATTTTATTACTGGCTGTAGTAGCGCTGGTACCCAGACCCGTTGCACGTGATGACGGATTCCCTGACGAACACTCAAAGGAACTCGCGTGGGAAGCTTACAAATGCTCCGCAGCCGAATCACTAGATGCAAGCATGATTGGACTGCAAATATCCATGGATATAATCCAAGGGAAAATCCCAAATTCTGATCTGGCAGAAGCAAAACGTTTCTCAGCGCGTATGGGCAGCGCAAAAACCGGCGAAAAGAAAGTTTCCAATTACATGGAATACACGTCCACTAAAGAGGCGTC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCTCCGCGTACGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //