Array 1 15428-10902 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZFX01000050.1 Lapidilactobacillus concavus DSM 17758 NODE_64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 15427 36 83.3 30 ..C...G..T.G.........G....G......... AGGGCAAAACAGTCAAAACTATTGAAGGGC 15361 36 100.0 30 .................................... ATACCCAGGTTTCAGATTACGTTGGCACGA 15295 36 100.0 30 .................................... CCACGCGTAAGCATAAATCGGCAAGGCTGG 15229 36 100.0 30 .................................... TGGGTTTAAGCGCAAAACAGCAGAAAGTTG 15163 36 100.0 30 .................................... TGATAGTAAGGCAACTCAACCTATTGTTAT 15097 36 100.0 30 .................................... AGACGATTTGCTTAGCTGGTAAAAAACTTC 15031 36 100.0 30 .................................... AACACTATCGAGTGCTTGTAACGCACCGAA 14965 36 100.0 30 .................................... AAGACGCAACAGAATATAATTTAAACCTAT 14899 36 100.0 30 .................................... TAAATGTTATATTCCCCGTTATTAATTATT 14833 36 100.0 30 .................................... CAATTGAAGGTGTGGCGCGAAAGCTTAACA 14767 36 100.0 30 .................................... TGCACCATCGACAGCCCAATTTAAGATACC 14701 36 100.0 30 .................................... TGCCGCGGCAGGACCAAGCTTCAAAGCCGG 14635 36 100.0 30 .................................... GGAACAGTTGCGTTCCAGTCCACATTGTGG 14569 36 100.0 30 .................................... ACCAGATTGGTGAAATTAGCCAAAAAGAAG 14503 36 100.0 30 .................................... ATTAACCAAGACATTCTAAAGGCTAAACTA 14437 36 100.0 30 .................................... CACCGTCAAGCTCGATTTCGTTCACAGGCA 14371 36 100.0 30 .................................... CATCTTCCAATCCTTCAACCTCCTTAGTTA 14305 36 100.0 30 .................................... TCGTGGGATTAATTCACCGAATGCACTCGG 14239 36 100.0 30 .................................... TGTGCCTTTTGGCCTTTGTTGCCGATGTAC 14173 36 100.0 30 .................................... GGTATACTTAAAGAGTAGTAAAGAGTTAGA 14107 36 100.0 30 .................................... ACGTTGACGCGATTAGGCGCTCTGTTTCAG 14041 36 100.0 30 .................................... CTAACTTGGCGTCATCAACTACCTCCAACT 13975 36 100.0 30 .................................... ACAATACAATTCTAAACGAAAGTAATCTCA 13909 36 100.0 30 .................................... TTTGATTGGTATCGAGACTCAATACGTTGA 13843 36 100.0 30 .................................... GTACGTTGAGCGAGCCGCTTATGATGCCAG 13777 36 100.0 30 .................................... GACGTCAGTTGATTAATCAGCTTGAGACCA 13711 36 100.0 30 .................................... CACCAGCGACGTCCGCTTTCCAAAACAACT 13645 36 100.0 30 .................................... CATTGCAATATAAACCTCACTGCCTTTATA 13579 36 100.0 30 .................................... GGGACAATAACGACGACATTGAGTAAGGAT 13513 36 100.0 30 .................................... CTTGCGACTGGTAGTTATCACAGTTGGATC 13447 36 100.0 30 .................................... CGGCAGTACGCTCATGAGTGGTGTTGACCC 13381 36 100.0 30 .................................... TAACATATAGATAGCTGTCATTACTCTTGC 13315 36 100.0 30 .................................... CGGATTTGATCATATGTTGAAGTCATTCAA 13249 36 100.0 30 .................................... TGATGAAGATGATAAGACAGTCGTTGCAAT 13183 36 100.0 30 .................................... TTCATACTTGTCAAACTTTGCATTTCCTTG 13117 36 100.0 30 .................................... GATCGTCAAACGCTTTTGTGTCTTTATAGT 13051 36 100.0 30 .................................... TTGTATCTAAACTATAACACACTCACAAAA 12985 36 100.0 30 .................................... CCACATATGGGCGTGGATATGGTGCGTATT 12919 36 100.0 30 .................................... CTTTGAGTTTTCATACCACTGGGCCTAACG 12853 36 100.0 30 .................................... AAGTGGATCAATGCTTGCACTTTTCCATAG 12787 36 100.0 31 .................................... ATTAACCAAGATATTCTTAAAGCTAAATTAG 12720 36 100.0 30 .................................... TACAAGAGCCGGTTTCTAACCCTGGCGACA 12654 36 100.0 30 .................................... AAGCATTTCAGCTCACAACTATGACTTTTT 12588 36 100.0 30 .................................... AGGTGCATTGCTTACCCCAAAAGGGTTGAG 12522 36 100.0 30 .................................... GATGACTCACGGTAGACGTCCAGTGCATCA 12456 36 100.0 31 .................................... TTATAGCACAATCAATTGGAGATAGCCCTTT 12389 36 100.0 30 .................................... AATCACCAGTCTATAATGTTATTCCAGTTC 12323 36 100.0 30 .................................... TCAGTTCAAGGCAGTCGCCTTGTTTTAAAT 12257 36 100.0 30 .................................... AGGTGCCAAGTAAAACTGACTCGAATAAAC 12191 36 100.0 30 .................................... AGACGATGTCATCAGCACATATATGCCTGG 12125 36 100.0 30 .................................... TGTAGGGAAGTGGAAAAGTGCCACACGAAT 12059 36 100.0 30 .................................... TTAAGCAGATGATCGGAATGGGCGTTACGG 11993 36 97.2 30 ..........................A......... CTGGCACTGCTACCACTGTTCAGCAAGCCA 11927 36 100.0 30 .................................... AATGACAGAACACGTTACTTGACATACAAA 11861 36 100.0 30 .................................... TAAGCGGCTGGATATTCACGATGTCCGGTT 11795 36 100.0 30 .................................... CGAGTGGTAGTAAGGTGATTGCGTCATTCA 11729 36 100.0 30 .................................... TCATCACAGATGAAGCGCAACACGCGTTGG 11663 36 100.0 30 .................................... CAACGCTTCTAACTGGATACCATACGAAGC 11597 36 100.0 30 .................................... TTGGCTTCCAATTGATAAGCTTCAACGTCA 11531 36 100.0 30 .................................... CGCTTGATTTAAATTATTGAGAGTTGACTG 11465 36 100.0 30 .................................... AATCATACATAGTCGCCCACGAACTCGCCA 11399 36 100.0 30 .................................... TGCCTGTGTAGCTGGATCTTCTACATAGAA 11333 36 100.0 30 .................................... CAAAGAGTGGTGTATAACCGTGAATGTTAC 11267 36 100.0 30 .................................... ACGTCGTCATTTGGTAACGCCCCTTTCTAG 11201 36 100.0 30 .................................... GAGAGAGGTTACTAATCTCGTTAACACCAA 11135 36 100.0 30 .................................... CCGTTCTAGGAGGCTTTAAGGAGTTGACAG 11069 36 100.0 30 .................................... AGAACAACTGTTTGTCTTCAATGGTCACAC 11003 36 100.0 30 .................................... GGGAAATTTATTATGTATAGCGGAATGAAG 10937 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 69 36 99.7 30 GATCTTAACCTTATTGAAATGACACTCTTCTAAAAC # Left flank : AAAACCAAATTGCCCGACAACAAAAAAAGCGATCTTCTAGTGCCATACGCACCAAGAAGATTGCCATAGCAGCTATGAGCCGCTTGATTAGAACCATATATCACCTAATCAAATACAATGAATTGTACGATTCAAAGATGTTCCTCGCCGAACTCTAATCGTCATTCATTTAAGTAAAGTATATCACCTACGAAAAAAATTACAGCTGAGGTGCTGTTTAGTATGGCAAAATATCAGATTAAATATGATTTAACGCCATAAATAATCTTATTTTGCGTAATTAAGAAAAGGAATCCCTTGATATAGAAGAATTCTCTTGACTAATGGTAGAAAAAAGCGGTCCAACTTTCGATTACGAAAGAAGGCCGCTATGCTGAAAAACTACACGAAGAGATGCACCGCGTCGAGGCTCAGAGCTATGAAAAATCTTTCACTTAATTTACACCAGCGGAGATTTCAACAGCGATTCATATTCTCTATAAACTTGCTGAATAAATGTG # Right flank : CGTTGTTTTCTCATTATTGATTCATGATTACTCAGCGCGCCAATCAACAAAATCTTGATCGATATAATAATACTGGCAATTTGCAAAATAATCGTCACTTTTCAATTCTGAAAACTCGATTAATAAAGTGTACAGATCAAGTGTTTCAATTAATCTCACCAATTCTTGAAATTGGCTGACACTGAGATATTGATGCACGTTGGTTAAGACGAGTATGCCTCTTTCATCAAGATCAGAGGCACACTTTAATACTGTCTCTATTATATCATATGGTTGTGTTTTCAAGTCACTAACGAATGAAATAGTCGTGGTTTTTAACAGTTTACTAAGTGAAAATTCCGCATCAACTGTTAGCGGAAGATCATACGTTAAAAGTTCGTCCATGACCAGGCTCTTGAGCTGCTGATCAATCTGAATGAATTGACTCAGTCTTTCAGAGCCAACATTTTTGACAATTTTCTTTTCGATACCTGTTTGAAAGACTTTGCTGATTTCTGGGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCTTAACCTTATTGAAATGACACTCTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA //