Array 1 233543-231253 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXQG010000001.1 Citrobacter sp. RHBSTW-00325 RHBSTW-00325_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 233542 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 233481 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 233420 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 233359 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 233298 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 233237 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 233176 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 233115 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 233054 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 232993 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 232932 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 232871 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 232810 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 232749 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 232687 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 232626 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 232565 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 232504 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 232443 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 232382 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 232321 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 232260 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 232199 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 232138 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 232077 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 232016 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 231955 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 231893 29 100.0 32 ............................. GCGATACACACAGCCGCCGATCTTTCCGTTTC 231832 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 231771 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 231710 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 231649 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 231588 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 231527 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 231464 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 231403 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 231342 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 231281 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 38 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : CTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //