Array 1 14991-13771 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNOS010000014.1 Phocaeicola dorei strain D46t1_190503_B7 NODE_14_length_136032_cov_16.0535, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 14990 33 100.0 31 ................................. GGCCATGATGTTATTGCGCCTTATATCGTCA 14926 33 100.0 34 ................................. TGCACATTTCCTTTAGTTCGAGAAATCGTCATCA 14859 33 100.0 34 ................................. TAAAACACAGTCTGCTACCCCTTATGGTAAGGAT 14792 33 100.0 34 ................................. AAATCTGGTCATACATTAACTTATGATTGCGGAG 14725 33 100.0 32 ................................. TATGATGCTGTTATGTATGATGAATCTCCTGA 14660 33 97.0 35 ................................T TGTCCATAAACGCTGAACTCACACAATACCCCACC 14592 33 100.0 33 ................................. CCAGAATTGCTTAAAGCTGTTGACCATTGTCAG 14526 33 97.0 31 ................................T AGCGATGTCGATGTTGAGTATTTTATTAATA 14462 33 97.0 33 ................................G TTATTGGCAATGGAAGTCTAATATCGATACTGT 14396 33 100.0 33 ................................. GCCAAGCCAAAGTCTGCTCTTTTTTATCTCTGG 14330 33 100.0 31 ................................. ATGATGAGGTGAACACGTGTATAGACAACCA 14266 33 97.0 31 ................................C TCTATTATCATTTTTTTTAAGGTTAGGAAAA 14202 33 100.0 31 ................................. ACGTGATTGGCAAGAAAAGATGTGGGGTATG 14138 33 97.0 34 ................................T CTCGAACTTGCCTTTAATGCGGATGGCTTCCAAG 14071 33 97.0 34 ................................G CCATGATATTTACTATATTTGTTTCTTCCTGGCA 14004 33 100.0 33 ................................. CCCACATGTGATTGTTTTCAAAACCATAGTCAA 13938 33 97.0 34 ................................C TCCAGTACCATGTTATGTACCCAAGGTATAGGAT 13871 33 100.0 33 ................................. TCAATGGCCCAGTATTCGGCAATATCGAAGATG 13805 33 84.8 0 ..........G.......A.A.......G.G.. | AA [13787] ========== ====== ====== ====== ================================= =================================== ================== 19 33 98.1 33 GTCACACCCTACGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCATGTTTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTTTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTAGAAGTAATAGGTGTTGAAACGGCTTATAAAGTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGAGTATTTCTTCGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAACTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTCGGTCAAGTTTATGGAAGAACTGTAAGCATTCGGCCTCTTATGTATTTCTCTCCAGGCTTTTGATTTTGTTATGACTGGAAAAAACACGTACAAGCCCGAATGCTTATCTTTTGTCTGTTTTTTTTTGTTGTTTCACCTAGGTGACAATACATTGGCACCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGATTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTGCACGATAAGGCCTTGTAAATGAAGTAAATGGATGAACCATCATGTAGGACACATCAAGAAGGAAAATCTATGAGTCTTCAGAAACAATGGTAAAAATCCACATACATACCAGTTAAGGGGAATTACGGATCCTTTTACACCACAAACCGTTGAAAATAAATGGTTTGTGGTGATAGAAACAAAAAAAGAACAGATGTCTTTTTAATACGCTATCTTATCCAATATCCCGTTCAAGTGTGCAATAGCCACTCC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTACGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //