Array 1 275342-273882 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMIF01000002.1 Sporanaerobacter sp. PP17-6a isolate PP176A, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 275341 29 100.0 36 ............................. TAAACTAAAGGTTCCGGTATAAAATCGCCTTTTTTA 275276 29 100.0 35 ............................. GACGTTATGGCGGCTACAAGGGCCTACAACAGATG 275212 29 100.0 35 ............................. GTACAAGCCTACAAAGCGGGGGTAAGGGGCCGCTT 275148 29 100.0 37 ............................. TGTAAGCTACCAAGCCGCTTAACCCGTTAGTTTCCAA 275082 29 100.0 36 ............................. CTTGGAAGTTTATAAAAGAAAATCCATGTCAGGGCG 275017 29 100.0 37 ............................. ATAGCTATGTTGCTATCGGAATGTCCTATTCTTTCGT 274951 29 100.0 35 ............................. CTCCTACGCAAATAATTTCTTTTGCATAGTCCCCC 274887 29 100.0 36 ............................. CCTACAGAGATAAGGATGGAAGTATTCAGGCTATAG 274822 29 100.0 36 ............................. ACAGTCCTACCACAAGTTGTTCTTGTTTGCATATTC 274757 29 100.0 36 ............................. AACCATACAACCGCCGCATATGTTGCCAACATAATT 274692 29 100.0 36 ............................. TGTAAACTTGTGTCACTCCTATTCTTTCTGCTAATT 274627 29 100.0 35 ............................. TACCTCGGAGAGGACGATATGACAACAGATAAATT 274563 29 100.0 37 ............................. TTTTATGAGCATTTTTAATTTGAGAGTACGTTTTTCG 274497 29 100.0 38 ............................. GAAGGAAGGAGGGCGATATAATGGCATGGCAAGAACCA 274430 29 100.0 35 ............................. TTGTAATAACCTTTCATCATTCTACCTCCCCTATC 274366 29 100.0 36 ............................. ATGCTGTGGTATATTCATTAAGCATATTCTTTTCTG 274301 29 100.0 38 ............................. AAAGGACAGCAGTACATGGAAGTTGACGAAGAAACCGG 274234 29 100.0 35 ............................. CCCCCTAACCTTGTACGTAATATCTGCATATTCTG 274170 29 100.0 36 ............................. TAAACTAAAGGTTCCGGTATAAAATCGCCTTTTTTA 274105 29 100.0 35 ............................. TTTCCGCTATCTTTTCATCCACCGCCGCCTCTGCT 274041 29 100.0 36 ............................. GATGCTCCGTTCTTCAATGAAAGCATAGCCATAGTA 273976 29 100.0 37 ............................. CCACTATCAAAAAGCTTTCTTGCAACCTTTTTATTTA 273910 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ====================================== ================== 23 29 99.9 36 ATTTATAATACCTAATGAGGAATTGAAAC # Left flank : CGGAACTCCCCCCCACGGTGGATTGGCTTATGGCTTTGACAGATTGATGATGCTTCTTACGGAAAGTGATAATATAAAGGATGTTATTGCTTTTCCAAAAACTCAGAGTGCTACTTGCTTATTAACGGATGCACCCACGGAAGTCAGCGAAAAACAATTGGAGGAAGTTCATATTAAAGTCAATTTAAAATAAGAGGAATAATTTGAGGATGCTGAAAATACTACCGGAACACAATAACCGATTAGTGGTTGTTGTGTTCCGGTAGTTAATTATAGTTTTTTTAAGAATTTCAACCAAGGTACATTGTCTACTCAATAACTACAATAAAAATAAATTGTTGTCGACCCCTAATAATGTAAAAAGTCCCGGGGATCGACGGCGATTTATTTTTTTGCATAATTAAGTAATACCAATAAATATATAGAGATTATTAAGAAATTATATAAATTTTTTGGTTTGACAAAAAATAAAGAATATAATAATATCAATGTATAAATGG # Right flank : GGATTTGAAATTAATTTCTGTTAAGTTACTAACATGGACATCACTATCTGTCTTCGACACTATTATTATAACAAAAAAGTATTGAAAATACTGATGTACAGTAGTTTTCAATGCTTTTTTTCGGTATCCTCGAATTATCTCTCTTATTTATGCTTAAAAAGATTTTTGCCATGGTATATAATAAAGGAAATATAAAATTGAGTTCAAGGAGAGATTTAGATGAACCAAATTGGTTTAGTATTAAAAACGGATGGAAATAATGCTGAAGTTGAAGTCAAAAGGTCTACTGCTTGCGGGCATAGTTGTGAGAGCTGTTCGGCTATGTGCAAAGCTCCGAGCATTATTGTAAATGTTCCGAATTCCCTTGGAAGCAAGGTGGGGGATTATGTTGAGATAGACATGAAAGAGAACAAAATTTTAAAATATGCATTTATTATGTATGTAATACCTTTTTCAATATTCCTCTCAGGTATTTTTTTAGGAATAAAAGTTTTTAAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATAATACCTAATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 1 155333-155624 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMIF01000004.1 Sporanaerobacter sp. PP17-6a isolate PP176A, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 155333 30 100.0 36 .............................. TCTAATGGAGTGGATCCTGCATCAGACCACAAAGAA 155399 30 100.0 36 .............................. GTGGAAGGAAAAGTGGCAAAGGTAATAAACAAACAT 155465 30 100.0 36 .............................. AAGAAAGGCTTGTTAATATCGTATTCGCAGATTTGA 155531 30 90.0 35 ...............G......G..G.... TCTACTATATACACACTACCGTCCTCAAACTCAAC 155596 29 83.3 0 ...............GT.....-G.G.... | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 94.7 36 GTTGAACCTTAACATAAGATGTATTTAAAT # Left flank : GCAGGTCCATACAAAGGACAGCATCATACATGCCTTGTTCAACCTCTTTTAGGAGTTCCAGCATTTCAGGCCTATGTATTAAACTTTCTCCGGATACTACTTCTTCATGTATTTTAACTATGCTTAAATTCTTTTCTTTGGCATACTTTAGAAGTGTTTTTCTATGCTTAGCAAGTGTTTCGCCCTGCCCGAATTCTTTCTCAATTTCTTCATCTGCACGTGATTTACGTAGATATATACATACATTCATTTTTTTGGCCCCTTTGTTTATTATATTTTATATTATATTAGATAAGAGGGTAAAATAAAAGATGTTATTATTTTATTTCCCAACCTAATTTATGGATTAGCTCAATTCAAATTATTGCAAAATAACTATTCTAAGGATATAATATATATAAATAAATTTAATAAAGACGGTGGGGAAAATAAATATAAAATCAAGAAAGCAACAGGTATTAAGAGATTTTATGAAAATGATGAATGTGTAATTTGATGTA # Right flank : TTAATACTTGCAGGATATAATTAATAAAAAGAAAGGGATTGATTTAAGTGGATAATAATGAAAAGATTTATGATTTATTAGAAAAGATATATGTTGAGTTACAAGATACTAAGAAAGGCTTAAGAAATGAATTACAGGATACCGCAGAGAATCTAAGGAGTGAAATGCAAGATGGCTTTAATAAAGCAAATTCTAAGATCGATAACTTGGAATCTAAGACCGGAAGTTTAGAGAGCGAATTAAAAGATTTTAGAAAAGAGACTAGTGATAGATTTGATAAGTTGGAAAATAAGCTCGATGATATTGAAGCAAACAATGCAGATAGGCATGTTACTATTAATGGGGAACTAAAAAGGATAAAGGCTGGGTTGTCTAAAGTTGAAATAATTACTGCCGACAATTGGGGAGATATAGCTAGATTAAAGGCTAAAAGGAATAATATAAAGTAATATAAAATGATTATTTATTATATGGGCAACCAGTGGATAGAGGTTGAACCG # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 5674-5963 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMIF01000006.1 Sporanaerobacter sp. PP17-6a isolate PP176A, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 5674 29 100.0 37 ............................. TAAGAAGTGGAAGAATACGAACCCCCGTTCATATACA 5740 29 100.0 36 ............................. TAAAAAATACGACTATACAATGCCGCTGGCGACGGG 5805 29 100.0 36 ............................. ATCGACATATGTCTAAGCAATAAGTTGATTACACTC 5870 29 100.0 36 ............................. AATTTGAAGGGAGTGAGAGAAGAATATGAACAACTC 5935 29 79.3 0 ......................CCCC.TA | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 95.9 36 GTATCAGAATACCTATAAGGAATTGAAAC # Left flank : TGGAGACAATAGTAAGATAGAATTTATTAATAATACGGATGGGACTATTTCAATACTAATTAAAAATATTACAGAATTGTCTAATGTGTGATAACGTGTTATATAATCTCATAAGATAGACTAATCTCTGTTTTTTTCTTATTCACCGCTTGCTTACCATGCAAGTGGTGAATCTATAACAATAGAAAAATCTTAAATTAATAATTTGACAAACTCATAGTAACCAATCTTCTCCCAACTTTATATTATATATGGGAATGAAAATTCCTATTTTGATTATTCTTGTTCCAATTCTAGAAAGGGTCCATTAACTTGGGCCCTTTTGTTGAAATTTTTATTGTCGACCTCTAATAATGTAAAAACTACTGGGGTTCGACGATAATTTATTTTTTTATAAAGATAAGCAAATCCAATATGTATACCAAAATTAGGTGATAAACATATACTATTTGCTGATTTGACAAAAAAAGAGAAATATAGTAATATCAATACATAAATGA # Right flank : ATGTACTAAAAAAACACCTATGCTAAATAAAATAAACATAGGTATTTTTATTCTTCCCATCCCATTTATCTCACAAAACATCCCTAACATATTGAAATCTCCACAAATAATCTATATATCCATCATATTGAAGGCAATGAAATTTCACTTATGGATATATTGGGAACGGACGTAGATGACATAATAGATCAAGTGGATTTGAAATTACAAGTAAAGAAATTGTATTCCAAAATAAATAAAGTATTGAAAGATAGGGAGAAAGTTATTGTTGAGCTAAGGTACGGACTTGTCGATGGAGAATGTAAGACACAGAGAGAAATTGCCGATATGCTGGGGATTTCACGATCGTATGTATCAAGAATTGAAAAACGAGCTATAAAAAAATTAAATAAATCATTAAACGGTGATGGTTGCATTGATTAGAAAGGCGATGTTCAAAAACTACTTTTTAGCAGCTGGAGATACCTTTTTTTCATAAAAGATAAGACATGCCCAATATT # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAGAATACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 21479-21773 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMIF01000001.1 Sporanaerobacter sp. PP17-6a isolate PP176A, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 21479 30 100.0 38 .............................. GAGAGCATCAAAAAACACACCAATTTTGAGCTTAAAAT 21547 30 100.0 36 .............................. TGCGGATGCTGCCGTTTTCGTCAAATCCTCTTCCAG 21613 30 100.0 35 .............................. ATACTACCTTCAAAACAACCGCATTTGACGAATAT 21678 30 100.0 36 .............................. CTTTTACACCTATCTAAAAACTCTATAAGCTTGGGC 21744 30 93.3 0 ........................C.G... | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 98.7 36 GTTGAACCTTAACATAGGATGTATTGAAAT # Left flank : TGATGATGAATTACAAATAAATATTATATTTATGTTAGCTATAAAAGAACCGAAGGAACAATTAAAAATGTTGCAAAAATTAACAGAAGTTTTCCAAGATGATAATGCGCTAGAGAAAATAAAAAACGCCAAAAATGAATTGGAAGTATTAGAAATAATGAAATCCTTTTTAGACAATTAACACAAGGGGACGGTTCTTCTGTGTTGCTTTTATCTTTAAAACCATGTTAAAACCCATACATGTAGGCAGAAGATGGGCTATTTATCTACAGAATATAATCAACTTGACTATAGAATTCAAAATATCAAATTATTGTTCTATGGTTTTTCCCAACCTAATTTTAATTTTATATAGACTAAGTTATTGAAAAATACATATTTTATAGGTATAATATATGTATAAATAAATTTATGAAAAACGGTTGGGAAAATAAATATAAAATCAAGAAAGTAACAGGTGTTAAGAGGTTTTATGTAAATGATGAATGTGTAATTTAGTG # Right flank : TTAAAACTTGTAAGATGTAATTAATAAAAAAAAAGGGACTGATTTAAATGGATAATAATGAAAAGATTTAATAAAGTAAATTCTAAGACTGATAGCTTAGAAAGCGAATTATTATCTAGTAAAAGGCAAGATACACTATGTCAAATAACCTTAAAAACAATTATCGATTAAATATTACATTTTATTATTTTATATCTTTTAACTAATTATTAGCTGAAGAATGAAATTATACAAAATTATTTATACAGGCTAAACCCCTAACGTCAACCTTTCATATAAGAATCTCGGTAAATTATTTTCTGCGATTTTTCGAACGGTTTTGTTTATATCGTATTCTTGACGTCTATAACAAATAGAATATTTTTCCGTATCATATATTACATAGCAACTTCTTGAATCTCCATCTCTAGGTTGCCCTACCGAGCCTATATTAAAAATATATTTTAAATGTTCATCTAACAATATTTCTTTATCATAATCAATTGTTGTAAACTCTTTTA # Questionable array : NO Score: 9.00 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 69905-73178 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMIF01000001.1 Sporanaerobacter sp. PP17-6a isolate PP176A, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 69905 30 100.0 36 .............................. GATGAAAAACATGGCAATCAATCTAACCGAACTTTC 69971 30 100.0 35 .............................. ATGATGAATTTCTCCAGCCTGCCCGCATATACAGC 70036 30 100.0 36 .............................. ACAAACAGAAAAAGGCAACCGGCAGTATAGTATTTG 70102 30 100.0 36 .............................. AATTAGAACGATTGAATGTTCTCTTAGAAGAGAAAA 70168 30 100.0 36 .............................. GAGATAGGCTTCTACGGAACGCAGGCTACAGCAAAG 70234 30 100.0 36 .............................. GTGAAAAAGGGACTATATTTGGTTACACTTACTACA 70300 30 100.0 37 .............................. ATTTGGGGCTTGAATACCTATTTAGGGCAAAAGAACA 70367 30 100.0 37 .............................. GGAGAACAGCATACCTTTAAGTGAAAAAGCACTGGCA 70434 30 100.0 37 .............................. AAATTTTACGAGGGCAAATTCTTTTCCTTCCCCAGGA 70501 30 100.0 36 .............................. AAAAAAACGAGTAGATGGCAGCGAAGAAGAGTTTAC 70567 30 100.0 36 .............................. TGGTTTAATCAAAACGCCGAGGATTTGGAGTTGTTA 70633 30 100.0 36 .............................. AAAGAAACTATGGAGTACGAGAATTGGGTTAGACAG 70699 30 100.0 36 .............................. TGTTTTCCCTTATAGTAGTCTAAAGCGTCTTGCAGA 70765 30 100.0 37 .............................. AAAGAAGAAAAATTTTTAACTGAATATTTTCAGCTAC 70832 30 100.0 37 .............................. CAGTCTAAGCAAGGTAGAAAACTCCATGTCTCTCTAA 70899 30 100.0 36 .............................. CTTTTTATACCCGGTTTACTGTCAACTTTTATTATT 70965 30 100.0 37 .............................. TATTTAAATTGTGTGCCTATCAATTGCCCCGCCGACT 71032 30 100.0 36 .............................. TTTTATCACCTACCTTTTAAACATAAGAAAGGCACC 71098 30 100.0 36 .............................. AATAATAAATGATTTGAACGGCTTAAGTCCACAGCT 71164 30 100.0 36 .............................. TAAGATCTTTGCCCCATAAATCTCCGGCTTCTGTAG 71230 30 100.0 36 .............................. ATCCCCAAGATAATCGGCTATATCCCGTATGGTTGC 71296 30 100.0 36 .............................. GCCTTTGATTTAGAGTTTTATATATTTCATCTCTTA 71362 30 100.0 36 .............................. TATGAAGATAGATTAAAGGAGGGGAAAGAAGAATGA 71428 30 100.0 35 .............................. AACTAAGAGAATACCGTCACCTTCGGGCATTTTTC 71493 30 100.0 37 .............................. ATTTTGGTCAATGATAGCCATCATCATTTCTAATTGA 71560 30 100.0 37 .............................. TATTAACAAGGAATGGCTTAGCCCCTTTTACGTCAAG 71627 30 100.0 36 .............................. GAGCCTGATACTGTAGCCGCACACTTAGGAAAAATT 71693 30 100.0 35 .............................. TGCAACGACAGGAAATTTGACACATTCGAAGCTAA 71758 30 100.0 36 .............................. ATGGAAGATATAGAATTTATGGACATTCAAGAATGC 71824 30 100.0 36 .............................. GCCCTTGTATCTAAACAAAAGATATAAAATATTAGT 71890 30 100.0 36 .............................. TTCTGTAGCTTCTTTGTAGTCGTCACTTTCAAACAC 71956 30 100.0 36 .............................. CAAGTTGTTTTTGTTCGCATATTCTCTCACGTCCTC 72022 30 100.0 36 .............................. TTGCAATTACTGTATTATAGCTACCTATTCAAAATT 72088 30 100.0 36 .............................. TATTGACTTCGGGTCCTTTGCATTTGGTGTATCTTG 72154 30 100.0 36 .............................. TAATCAAGGCACTCTTGCGCTGTAAGCCACGTTTCA 72220 30 100.0 36 .............................. CTCAATTAATTGTTTCAATTGCCTTGACATATATGT 72286 30 100.0 35 .............................. TTTTCTAAATATGCTCTTGTGACAGATGTTGGAGA 72351 30 100.0 36 .............................. ACGGGATTATTTATGATGCATAATGTACATGGCAGG 72417 30 100.0 38 .............................. GACGTAGGAAAAGGGCAGAAAGAGTTATATGACCTATT 72485 30 100.0 37 .............................. TTCACATTTATCATTTATTTCTTTCAGCTTTTTATAT 72552 30 100.0 36 .............................. TAGCTTTTCCTACATTCACAGGGACACCAAAGGCGC 72618 30 100.0 37 .............................. TCACTAATTAAAAATGGGTTTGGAGCAATTGCCTATG 72685 30 100.0 35 .............................. AACGTATACAACAAAACAAATGGCAGAATATGCAG 72750 30 100.0 36 .............................. AAGTAGTAAAACAATGTATGAAAAGAAATGGGATAA 72816 30 100.0 37 .............................. TTTTCTTGACATATTTTTCTATAGCAGCAAGGACCAT 72883 30 100.0 37 .............................. CAAAGAAAGAGTTATCCAAAGATGAAAGAATTTCCAA 72950 30 100.0 37 .............................. GAGTATAAGCAAGTTTTAAATTCTTATGCAGCCAAAA 73017 30 100.0 36 .............................. TTATTATTTATTGTAGTAGTAACTATAGGACTAATA 73083 30 100.0 36 .............................. GTATGATTTTCTCTCCTGTCCAGCTGCTAACTTTGT 73149 30 83.3 0 ...............T....A.GCT..... | ========== ====== ====== ====== ============================== ====================================== ================== 50 30 99.7 36 GTTTTAATAGAACTACAGTAGAATGTAAAT # Left flank : AAAAGAATATGAAGCCTTCAAAATGTGGTGGTGATAAATTTGTATATAATACTTGTATATGATATAGTTATGGATAAAAAAGGTGCTAAAGTTTCAAAAAATATATTTAAAATATGTAAAAAATATCTTACTCACATCCAAAAATCTGTATTTGAAGGAAACTTAACTGAATTAAATTGTATGAAATTAAGGATGGAGTTAAATGAATATATTAGAAATGATAAAGATTCAGTACTCTTGTTTAAAAGCAGAGATGAGAAATGGTTGCAAAAAGAATTTTTAGGAATTGTTGATGATAAAACGTCTAATTTTTTCTAAGTGCTTGTCGATGTGTAGTAGCGCAAAAAACATAGAGTATTGACAAACCTGTAAGTTTCAATATATAAGTTAGTATATTTTTTTATTTTGATGCTGTTATATATATTAATTTTATAAATATTATATTATCGACAAAATATAGAGCACAAATTGGGTAATATCAATAACTAATAACAAACGGG # Right flank : TATTTCATAGCTTATTTGTAAGGATTTTAAAAACAAAGGCGAATTTTATATAAAATCTTTAAAACCATTATTTGATAAAATTGAATATAAAATTCAAAAATTCAATACTGAAGATAATTTAAAAATTGGCCTGAATGTAGTAGAGTGGTCTATTGAAAATAATTTAATACAACAAGGTTTTACTGCTTTGGAAGAGACCATAAGGACATATGTATGTAATGAAACGGATAGAAATAATAGGGAAAGAATTGCCAAAATTGCTCTTATGATAAAATCAGAGGCAATAACCGAGAAAAATTTGAGTACGGATGTAAAAGGAAAAGTAAAAAGAATTGCAGATAGATTGGATCCTGAAATTGCTAAACTTTCCTATCAGGTTTCTCAGAAAAGAAATTCAATAAATCATTTTGAATTTTCTGATGATTCGAATGATTATAACTCTTTAAAAAGAGATTTAAAGAAATATTATAAAGAATTTAAGAAGATAATTGAGATCTAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATAGAACTACAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 161867-162347 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMIF01000001.1 Sporanaerobacter sp. PP17-6a isolate PP176A, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 161867 29 100.0 34 ............................. AATCTGATAGCCGTATTTCGCTCGATGTTTCCTG 161930 29 100.0 35 ............................. TAATTAAGATAGCCATTATTAAAAGGAGGTTTAAA 161994 29 100.0 36 ............................. CAGCTATATAAAACTATTACTTAGCTTTTTAGAAGC 162059 29 100.0 36 ............................. TACCATAGCATATCATAATTATTTTTAACATGAATT 162124 29 100.0 36 ............................. TGGGAATATATTACAAGCATTTCAATCAAATTAAAA 162189 29 100.0 36 ............................. TTCTTTCTTCTTCCTTGTTTCTTTCCCTTCTTTGTT 162254 29 100.0 36 ............................. TTCGGGAGAGCTCTATGGCCGTTTAAAATACCTGCG 162319 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ==================================== ================== 8 29 100.0 36 ATTTATAATACCTAATGAGGAATTGAAAC # Left flank : GAACAATATCTACCATTTATAGCTAAATGGTAAGGGATGTGAGATTATGTATATTATTTTAGTATACGATTTTGGAGAAAAAAGAGTAGCTAAAGCATTAAAAACATGTAGAAAATATTTAACTTGGGTTCAAAATTCAGTATTTGAAGGTGAAATTACTGAAGGAGATTTAAAAAAACTAAAAATTGAACTTGAGAACAAAATGGATAAGAATGAGGATTCATTAATTATATATACCTTAAGTAATAACAAATATTCCAATAAGGAAATAATCGGCTGTGAAAAAAATAAACCTACGATATTTTTCTAATGTCGACCTATAATAAGGTAAAAACATCGGGGGATCGACATTTGAAAATTTATAATAAAAAGGCTGATAAATACAGATTAATAGCAAATAACAAATAATTTCATTTAACAAATATTTATATATTGCAATAATATGAATGGCTAACTTTAGCTAAAAATATGGATTTATAATACCTAAGCTAAAAATATGG # Right flank : CTCTGTACACTTGCGGCCACACTAATCACCTCCTGAAAATTAAGCATAATAAAAGCACTTACTAAATAAAAATAGTGAGTGCTTATTTCTTTCTAAATGTCTATCCCATGCTTTTCTTTTAAAAATTGAATGAATTCTTTATGATATTTTTCTTTTTCTCCCTCCTTTAAAGGTTTGTAGCCTATAGTTGTTCCTCCTGGATTTTGTCCTAATCTTGCTTTAAATTTATCTTCATCTGAAAGTTTTTTATAAGCTTCTCCTTTCTCTTGCTCTGGCAATTTCATAAACTCTTCAAAGGTTAATTTTTTATTATTCATGATATTCCTCCATCATAATATAATATTTACTATTATTTTCAACAATGTCTGATATTCTAAATATTGAACCTCTTTGATATAAAACTTCTTGCTCTTCCGGGTTATATTTAGAAATATCCTTCCCTTGCTTAGAGTTTATTATAAAATATTGTACTTGTCCATCGGGGTTATAAATATTTATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATAATACCTAATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : NA // Array 1 72360-73242 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMIF01000026.1 Sporanaerobacter sp. PP17-6a isolate PP176A, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 72360 30 100.0 35 .............................. AGTCGATGCAAGCTGGTTATTCCTAAAAAAGATGA 72425 30 100.0 35 .............................. TTAGCAGATACACCAGCCCTCTTATATGCAGATTC 72490 30 100.0 35 .............................. CGCCATCGCCATTTATATCAACTTCGGCTATACAA 72555 30 100.0 35 .............................. GACAGAAAACGGGGAAATAGTGGAGGGAATAACAA 72620 30 100.0 35 .............................. TCACACAGCTGAAATATTGTTACGGCGGTGATATA 72685 30 100.0 36 .............................. GCATATGAATTGAAGGTTTCCATTTTAAATATTCTT 72751 30 100.0 36 .............................. ATTGATTAATAATGCCAATATGATGTTTGGGGGTTG 72817 30 100.0 36 .............................. ATTAACTCTTTTGCTTCTTCCTGAGTTAAATCTATG 72883 30 100.0 38 .............................. TAAATATTGCCAACAATTTCTATCTCGTAATTTTGAAT 72951 30 100.0 35 .............................. CTACTCATTCTTGCTCATCCTCCTCTAATTCAATT 73016 30 100.0 35 .............................. AATGTATCCTTGTTTGTATAGCCACGGTTGATATA 73081 30 100.0 36 .............................. CCGGTACTGCTAACTACTTCGCCGATTTTATCCATT 73147 30 100.0 36 .............................. TTCCAACTTGTATAGGCATGGGTTTTCTTAATTTAA 73213 30 86.7 0 ......................GC.T.T.. | ========== ====== ====== ====== ============================== ====================================== ================== 14 30 99.0 36 GTTGAACCTTAACATAAGATGTATTGAAAT # Left flank : TTTAAACCCTTTAGTTTGAAGGAGATGATGTAAGCGGTGAAGATATCCAATTATAACTATGCTTTTCTTTTTTATGATGTAAATGAAAAGAGAGTAAACAAAGTATTTAAAGTTTGTAAAAAATATTTTAAACACCATCAAAAATCTGTTTTTAGAGGGAATATAACACCATCAAATTTAATCAAGTTAACTGCAGAACTAAAGAAAATTATAAATTCCAAGGAAGATTTCATATCGATCATTAAGTTAATGAATGAAGACAGTTTTGACGAAGAAACCATAGGGACCAATTATAATGACAGTGAATCATTAATCTTATGATTTTTCCCAACCTGATTTTCAAGTTTATATAATTCCAGGTATTGAAAAATGAATATTTTGTGAATATAATATATGTATAAATAAAATTATAAAAATCGGTTGGGAAAATAAATATAAAGTTGAGGAAATAGCAGTCGTTGAGAGATTTTATATAAATGATGAACGTGTAATTTGATGTA # Right flank : TTTATAAATATGAGGAGTGAACTATTGTGAAAATAAAAAATGTTGCAATGATTGGGATGGGGGCAATTGGAACTGTATATGGTAGTTTTCTTTATAAAAAATATGGTTCGGATTTTGCTGTGATAGCAGGGGAAAAGCGAAATATAAAGCTTAAGTCGAAAGGAATTACTCTAAATAACAATACATTTTATCCTTTGGTGTTATCACCTGATAAAAAAGATATTAAATATGATCTGATAATTTTTTGCGTAAAAAATTATCAGCTTGATAAAGCAATCGATGATGTACATAATTTTATAGGTGAAAACACGATAATACTCACCATTCTTAACGGAATTACTGCCAGAGACAGAATATTGTCAGCATATCCGGATAATAAAGTTCTTTATGGCCTGTCTACGCATATGAATGCTGTGAGAACACCTGAAGGTGTTTTTAGTACAGAGTATGGAGAAATTCAATTCGGATATGGTGACAATACAGTAATTGCACCGGAAGTA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 78653-78878 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMIF01000036.1 Sporanaerobacter sp. PP17-6a isolate PP176A, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 78653 29 100.0 36 ............................. GCGTTTGGCCTTGCCAAAGGTGGTATAGTCAGCAAG 78718 29 100.0 37 ............................. AACAACTCTTCCGTCGTCGGAGTTTCGTATGCGGGAA 78784 29 100.0 37 ............................. CAGGAGTTGCAGAACCGAATACAAAAGATTATACAGG 78850 29 93.1 0 ...........T............A.... | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 98.3 37 GTATCAGAATACCTATGAGGAATTGAAAC # Left flank : ATGAAAACAATCCTCCCAACATATTTTGTACTTTGAAACTATCATATAAAACAAAATAAGTCAATTGCATTGTAATTGGCTTATTTAACAAAGTTATTCTAAGCCGAAAGCGTGGCAGTATATTTGTACCAACTTAATATCCAGATTGCTTACCATATAGTGGCGGACTATAGCAATAGAAAAATTTTAAATTAATAAATTTAACAAGCTCATAGCAACCAAATTTCAAACAACTCTATATTATATATGTGATGAAAATTCCAGAAAAAAAACTGCATATAGTCATCTCCTTTCAAAAGGGTTAAAATTAATTTTGACCCTTTTATTGAAATTTTTATCGTCGACCTCCAATAATGTAAAAACTACCGGGGTTCGACAATAATTTATTTTTTTATAAACATAAGCAAATCCAATACGTATGCCAAGATTAAGTGATAAACATACAATATTTGTTGATTTGACAAAAAAAGAGAAGTATAGTAATATCAATAAATAAATGA # Right flank : CTATAACTTGGATGTATAAGTATAAAAATAGGAGGGTAAGTATGCTTGAATTTAAATATGATACGCAACTATTAATAGATGGGAAGAATCTTTCTGAGGATAAAATTGGTGAATATATTACCAAAAATATAAAGGGAGATTGTTTATTAGCGGTCGGCAGTGAAGAGACGATAAAAATTCATTTTCACACGAATACTCCTTGGAAAGTGCTTGAATATTGTGCTTCACTGGGCGATGTTTATGATGTTGTCATAGAAAATATGGAACGACAAACCAATGGCCTAAAAGGCTAAACACAATTATATATGAGAGAAATTAGGATAAACAAAAGGGCCCATTAATTTGGGCCTTTTTTTGACTGGAAATATCTGAATTTTAATTTATAAAAAACAATAATAAAAGAAAGTCAAAATTTTATTGGAATTTCAGCAAAAAAATGAAAGTTTGACTTCAACAGATCAAAATAAATATGGTAATACTGTAGTAATGCATCATTTTAA # Questionable array : NO Score: 8.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAGAATACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //