Array 1 368020-367625 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEFV01000001.1 Dermacoccus nishinomiyaensis strain DE0125 NODE_1_length_1212975_cov_37.623199, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 368019 29 100.0 32 ............................. GCAAGCAGGCCGGCTACACCGGGCATCAGCGT 367958 29 100.0 32 ............................. ACCCTGACTCATCTCATGAAAGGCACGTCACA 367897 29 100.0 32 ............................. AATCTCGCCCGTCGCTGAGCGCGTCAACAAAT 367836 29 93.1 32 .........G........T.......... GGGTCGAACCGTCCGAGCGGCACATACAGGTC 367775 29 93.1 32 .........G.......A........... ACGTCCACCGCGACACGGCTGACGGAAGATAC 367714 29 96.6 32 .........G................... GTCCACTCGCATTTGGCGTCGCGGTATCCGTG 367653 29 75.9 0 .........G.........G.G..C.TTG | ========== ====== ====== ====== ============================= ================================ ================== 7 29 94.1 32 GTCGGCCCCACGCACGCGGAGATGAGCCC # Left flank : GCCTGGCCGTAACGTCGCCGCGAAAGCGGGCCTCAACCGTTCCATCCTCGACGCGAGCTTCGCCGAGATGCGGCGACAACTCACCTACAAGACTTCGTGGTACCGATCGCAGCTCCTGCCCTCAGGGCGCTTCGTTCCCACGAGCAGGACGTGTTCGACGTGCGGGGCTGAGAAAGCCAATCTGCCCCGGTCGGAACGCGTGTACCACTGCGAGAACTGCGCCACGGTGCTTGACCGTGACGTGAACGCGGCGAAGAACGTCCTTCGCGCCGCTCTCGCATCACACGACGCCCCCGGCATGGAGGAGTCGCAAAACGCCCGTGGAGTGCGTATCGAGACATCTGTCGCGCTGCGTTCTGCGAAGCGGGAAGACCCACCGCGAGGTGGGCCACCCCGGCCGAGTAATCGCGTCCGGTCATCTCCCCCCACGGGGAAGCGAAAGTGAGGGCAAACGCTTCCCCCACCAACTGAACAGCGCGGAAACACAGCACCCCGCAAGG # Right flank : TCCGTGTGGGGCGATCCCTGCGGCTCTCCCTCTCAGCCCGCCCCTCATAAGGGCTCTTCACGAACGAGGGTGTAGCGCGGGTCTGAACCCTCCGGCTTCGAGCAGCGACCGAGCGATGTAGTGGGTGAGGTTGCGGAAGCCGAGGGCGGAGCCGCGGAGGTGTTCGAGTCGCCCGTTGATGGCCTCGGTCGGGCCGTTGCTGGTGCCGGGGCGGTCGAAGAACGCGAGGATGTCGCCCGCCCGCTGCTTCATGGTCCGGCCGAGTTTGCGGACCTCGACGAGCGCCGCGGGAACGCCGCTGCTGATCGCAGCGATCACCTCCTGCATCATCGCCTTCGTTTTCTTCTTGTCGGGCTCCCGGTAGGCCGCGACGATGCGCTGGTAGATGCCCCAGGTCGCCTCGACCTCGACGTGCTCCTCGCTCGCGAACACTGCGTCCAGGCGTGCCCGCTGCCGGTCGGTGAGCAGGCTCGCCCCGGTGTGCAGGGTGCGGCGGGCTT # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCACGCACGCGGAGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //