Array 1 18376-17627 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIPC010000049.1 Blautia wexlerae strain MSK.21.40 NODE_49_length_27070_cov_300.702, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 18375 30 100.0 36 .............................. TTATTTCTTTTATCTTTTTTGTTTCGCTTGTGTTCC 18309 30 100.0 35 .............................. GTAACAATGCTTCCTTCTGCATTGCCTGCAATAGA 18244 30 100.0 36 .............................. TCTGTTGTGTTGTCGTCGACTTCTACCGGGATCAGA 18178 30 100.0 34 .............................. TAGTTACTCTTATTTCGTCCGATTTGGGCGTTAA 18114 30 100.0 35 .............................. ATGAATATGCGAGACGGATGCATTATCGCATTCGG 18049 30 100.0 36 .............................. AAATTTGACAGCGACACAAACACATACACAGCAAAA 17983 30 100.0 35 .............................. ATTTCTGCATCTCCGCTCATTCTGTCGAAGTTTTC 17918 30 100.0 35 .............................. CAGGCAAACAATGTAGATATCAGTACGCCATTTGG 17853 30 100.0 35 .............................. ACACTTGCAAGTGAGATTATTTCCGACCTTGAGAA 17788 30 100.0 35 .............................. TAACTATATGTACGAGCAAGTTTCTTGGCACAATC 17723 30 100.0 36 .............................. GAGGTAGCGTTCGTTCACGCTCTTGATACCGAAGCA 17657 30 93.3 0 ........................T..T.. | A [17632] ========== ====== ====== ====== ============================== ==================================== ================== 12 30 99.4 35 ATTAAAGTAGAACCATATTGGAATGTAAAG # Left flank : TTTAAGTGAGACGATCATTCCTGAAACAGTATATGAAAAATATAAAGAAGAAATAGATACTATATCTCAGAAATTAAATTCAGAAAGATTAACTGCGATTGAAAGAAAATGTTTAAGAAGTAATATTTTGCAGTATTCGCTTGAAATTCCATATTATCACTGGAACTCTTATGAAAAGGCTATGAAAAAAGGATGTGTGCATCAATATCAATCAATTAATCTGAGTCCAGGCGAAAAAATTAAAGTTATGCAATGTCGATATGATGAAATGGGATATTATAAAATTGAATTTGTAGATGATGTAGATTAATAATGAAAAATTCTGTCGATGTTCGATAAAATAAAAATGCGAAGAGGTCGACAATGGTATGTAAATAAAGGGAATGAGTGGTTTTTTGATGAAAAACATGATAAAATGAATGGGAAAATAGAACAGATATAGTGAAGTCGACAAAAATGAGCAAATAAGCATAAAAAATATGCGGAACTGACAGCTATAG # Right flank : ATTCTTATGTTAAAATAGTTCTTTAATTGATACAAACGATTAATTTTATTTAAGCCAATACTTATATATCAATTCATAAAGAAAAAGGAGCTTTTAAATATACTATGGAGAAACTTGTTGTAGGTATCCTTGCGCACGTAGATGCCGGTAAGACTACGTTGTCGGAAGGGATTTTGTATTTGACTGGAAAGATTCGTAAGCTGGGGCGGGTGGATCATAAGGATGCTTATCTGGACACCTATAACCTGGAGCGGGAGCGCGGAATCACGATTTTTTCCAAACAGGCAGAGTTTGAACTGGGGAACAGGGGGATAACTCTTTTGGATACGCCGGGACATGTGGATTTCTCGGCAGAGATGGAGAGGACACTGCAGGTTCTGGATTATGCCATCCTTGTAATCAATGGAGCGGATGGTGTGCAGGGACATACCATGACCTTATGGAGACTTCTGACAAGATACCAGATCCCGACGTTCCTGTTTATCAATAAAATGGATCAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAGTAGAACCATATTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 32871-34489 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIPC010000011.1 Blautia wexlerae strain MSK.21.40 NODE_11_length_93975_cov_137.319, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 32871 36 100.0 32 .................................... TTTCATCTTCGTCATAGCGATCACCGCAATCA 32939 36 100.0 38 .................................... GGTCATATGGTATCACCTCCTATTCAGTTGTGCATCCC 33013 36 100.0 38 .................................... CCATTGTTACAACCCGTTTGTCTACCTCAGAAACGATA 33087 36 100.0 35 .................................... CCAAGGTGAAAGTTTGGACGTGGCAAGCTACCCAT 33158 36 100.0 38 .................................... AAAACGGGGCGTTTGTAAAACGATACATCTTACCATTA 33232 36 100.0 36 .................................... GTCATAGAAGATTTCTTCTGAGTTCATAAGTGCGTT 33304 36 100.0 38 .................................... AGTAAGAAACTGGTAAAGGAAAAGAAAAGCAAAAGAAT 33378 36 100.0 34 .................................... CGCAGCACGTCAAGTCTTCTCATTATTAACCTCT 33448 36 100.0 33 .................................... AACCTTTAAGGTTCATGTAATCACCTCCTATTC 33517 36 100.0 36 .................................... GGGGATTGGCATGACATGGAAAGTACACTTCTTTGT 33589 36 100.0 35 .................................... CGGTCCTGTCCTGTCAGTGTGAACATTGGCTCGCC 33660 36 100.0 35 .................................... AGCCATTCCAGACTTTGAGCCGTGACACTCTGTAA 33731 36 100.0 35 .................................... TATGGCGTTGACTTATTTAACGTATTCGCTGTATG 33802 36 100.0 35 .................................... GGTTCATGTAATCACCTCCTATTCAGTTATCTCTG 33873 36 100.0 35 .................................... AATGTGTCCATCAACAAGCGAACTCTCCCTTCTCT 33944 36 100.0 33 .................................... TGCGGTTGTGGATTTGATAAAATTTGTGATAAC 34013 36 100.0 39 .................................... AGTCACTACACACTAAACGTGTGCCATTGTCTAGTGCCA 34088 36 100.0 34 .................................... GTTCTTTCCACCTTTCTTATATATAATTAATATC 34158 36 100.0 37 .................................... ATTTTAGCTGTAGAGTCTAGCATTTGATTTTTACACT 34231 36 100.0 38 .................................... TGCGGCGAACTGATGAACTTCTGCATTTTCTTTGATGT 34305 36 100.0 39 .................................... TTTGAATAATGTAAAATTTTATAATACTTTTTACATTCC 34380 36 100.0 38 .................................... GGATCATCTTTAGTCGGACGACATTTAATCTGCTTAAC 34454 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ======================================= ================== 23 36 99.9 36 ATTGAGAAATGTAGCTCCCCGATAGGGGACGGAAAC # Left flank : AAAAAGGAAGATATTTTGGAAGCAGTGCAGTTATTTTATGAACAGTATTATCAGAATTTCCAGAAGAAATTTTCACGAAGTGACAGGAGAAAACCGAATACAGTATTTCTGGGCGGCGGAAGCGGCTTTGTTTCCAAGACAGTGATTTACCCATTATTCGGAGAAAAAGAGGGCATTGAAACTGTAAAAAATATTTTTGACAGAACAAATGTGCCTAAAACCCATCAACATTATAAAGATACTCGTATAGGAGTATCCCCTCATATTTTAAAATGCACAAGATATCAGGGAAAAGAATATATGATGGGGGAATGTGAATTAAATATTATTTGAGCATTTTGTTCTTAAATGCGCGAAATTCTGTATTTTGCCGCGCATGGCTTAAATACTGGATTTGTGAGAATTTTTTACTTTCCAAAACGGCTGCATTTCAATAAAATTACTTTTCCCCCGCAATCCCCCTATTCGTCCCAGACAGGACATGGGGTTGCGGGGATGGT # Right flank : TTCATATCCAAATTTAGAAACAGTTACATTTGGCAATAAAGTGAATTATTACTAGAGAAACAGAGGTGATATCATGAGTCTTTTATATGTAAATGACAGTGGTGCAACAATAGGAATAGAAGGTAACTGCTGTACCGTAAAACAAAAAGATGGTTCGAAACGAATGCTTCCTATAGAATCTCTGGATGGAATTACAATTATGGGGCAATCCCAGATGACGACACAGTGTGCAGAAGAATGTATGCAGAGAGGAATTCCTGTAAGTTACTTTTCAAAAGGTGGTAAATATTTTGGCAGATTAATCTCAACAGGTCACGTCAATGTAGAACGTCAGAGAAAACAATGTGCACTCTATGATACAGGTTTTGCTGTGGAACTTGCTATGAAAATTTTAAGTGCAAAAATCAAAAATCAAAGCGTAGTGCTGCGCAGGTATGAGAAAAGTAAAGGTTTAAATCTGGAAGAAGAACAAAAAATGTTAGCTATCTGCAGAAACAAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAGAAATGTAGCTCCCCGATAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA //