Array 1 23653-17220 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYFF01000038.1 Candidatus Chloroploca sp. Khr17 NODE_55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================================================================================================================================== ================== 23652 37 100.0 35 ..................................... ATAGACTGGAGCAGTTCCGAGGCCTCCATTGGTAG 23580 37 100.0 36 ..................................... TGGGCGCCGACGATTGCTGGACGACCGAGACCTCGA 23507 37 100.0 35 ..................................... GAGGTCGGCGAGCTGACGTACAGGGGGATGTCCAC 23435 37 100.0 35 ..................................... TTCGGGGTCATAGAACATGTCCGTGCGGCCCCAGT 23363 37 100.0 39 ..................................... CCGTGGGCTGTTGTCCCGCAGGCGCGGCGGCGTGCGGGG 23287 37 100.0 34 ..................................... ACGAGCGGTTTGCGGTTCATGAGGTAACTCCTTA 23216 37 100.0 39 ..................................... GGATGAACCGATATGAGGTTCTCTGGGGTGCAGGTCAAG 23140 37 100.0 36 ..................................... GAAGTCTCTCACCGCTGGATGCGGATGTTGATTACA 23067 37 100.0 37 ..................................... TTGTGGAAGGTCGATTTCGATGTAGCTCAGCACGCGG 22993 37 100.0 38 ..................................... TTTGAACCATTCCAAACCTCCTGATACGCCTTGCTCAG 22918 37 100.0 38 ..................................... ACATGCAGCGACTCCCAGCGCACATGTGGGACGTGCTG 22843 37 100.0 35 ..................................... AAGGTGGACTGGGTGCTGGCGCTTGCACAGATGAT 22771 37 100.0 36 ..................................... GCGCTGCGCTACGGCTTTGTTGATGGCACGCCCTGG 22698 37 100.0 35 ..................................... CTAGCGCGGGCCATGCGCCAGGGGAACCGCGAGGC 22626 37 100.0 37 ..................................... TCAACCTGCGAGGGCACCTCCAGCCGATTCAGCACGC 22552 37 100.0 37 ..................................... ACGGAAAGCATAGCGATACTGAGTGGAGCCATCTTTT 22478 37 100.0 34 ..................................... TAGAGCACCGGCTGGTTTCCGCTGACAACAAGGC 22407 37 100.0 35 ..................................... CAGGCGAAAGCCAGGCGGAATCCGGATATGATGGT 22335 37 100.0 37 ..................................... CCGTTCCACCGCAGGTCGCCGGTGAAGCCGTCGATCA 22261 37 100.0 38 ..................................... AGCAGCTCTGCCTGGCTCCACTGCGTGTTCACAATGGT 22186 37 100.0 37 ..................................... AAGGTAATCCGTGGCTATTCTCTTTCGTGGGTTGCTT 22112 37 100.0 36 ..................................... CACGTCAGCGGGATGGGGAGGGCGATATTACGGTGT 22039 37 100.0 36 ..................................... GGGGACGTGGAGGACGCTGGCGAGCAGGGTCGCCAG 21966 37 100.0 35 ..................................... GTCTATGTAACCCTCCACCCACCACGTCGTTGGGG 21894 37 100.0 36 ..................................... ACGTCTTCGTGACGGGCTGCTCGGTGGTGCTGAACG 21821 37 100.0 37 ..................................... ACCTTGGCGTGGTCCGTCGACGTCGGCCAGCACGGTT 21747 37 100.0 37 ..................................... CAACAGGCGGCTCGGGCGTGCTCGTCACAGCGGGCGG 21673 37 100.0 35 ..................................... ATAACGGCACATCATGATGCCATCACCAGTGACTG 21601 37 100.0 38 ..................................... GACCCTCTGTCTGGTAGGTAAATCCACTTTGCCATTCC 21526 37 100.0 36 ..................................... TGGCCGTCGGCGAGGCCGTCGGCGAGGCCGTCGGCG 21453 37 100.0 36 ..................................... ATGAACGAGAGGTTGGTTGTGGTGAAGTTGGTGATG 21380 37 100.0 34 ..................................... TCGAGCGGCTGCCCGTTCTCATTGGTGGGGATCC 21309 37 100.0 37 ..................................... CCGTCGGTTCGGGCGTTGCCGTCGGTGGTGGGGGAGG 21235 37 100.0 36 ..................................... ACGACTACCTGGCCGCAGGCCACAGCATTGACGAGC 21162 37 100.0 36 ..................................... CAAGAGGCCTTGACGCACCACGGGGAACTCTCGTGT 21089 37 100.0 36 ..................................... TCAAGACGGGTCATCGAGATGACGAACTGGACGAGG 21016 37 100.0 38 ..................................... CCTGGGCCGCGTACCTTGACCAACGCGCCGCCGATCTT 20941 37 100.0 38 ..................................... TGTTTTTATACATCATGGCGGCGTGCCTAGCTGCTCCA 20866 37 100.0 36 ..................................... CTTCTTGACGGGGCAAACACGCTTCCAAGCGTCAAG 20793 37 100.0 35 ..................................... ACGATCTCCGCCGTCGGTGGGACGGCGGTGGTCTC 20721 37 100.0 36 ..................................... CAACCAACTGATCATGACGTAGAACAAGGGTCCTAG 20648 37 100.0 36 ..................................... CTTGACCTGCTTCTGCGTCTCCAAGGCAGTGTCCTT 20575 37 100.0 38 ..................................... TCGGTTCCCGTCCAACAGAACTCCCCGGTTCCGCTGGA 20500 37 100.0 36 ..................................... ACCGTCTTGACCTGTTTCGTCTCGCTCACAGTTGCA 20427 37 100.0 35 ..................................... AGACCACGGCCTTCCAGCCGTAGTAGACTGCAAAA 20355 37 100.0 38 ..................................... ACCGATTCATGTGGGTTCTACCTTTCGATACTGGGGGA 20280 37 100.0 36 ..................................... AGAACGAACAGGGCCATGAAAAACGCGAACATGCGA 20207 37 100.0 36 ..................................... ACCCGGCGCTCGAGGTAGCGATGATATGTGTTGACG 20134 37 100.0 35 ..................................... AATTTATCTCCTCCGGACAGTTTGCGTCCATCTCA 20062 37 100.0 36 ..................................... TCTTCTGGAGAATAGCGCCGTCCTTCTTGATGATGT 19989 37 100.0 36 ..................................... AGGAAGTAGACCGCCCCCTGCCGCCACGGCTCCCCC 19916 37 100.0 35 ..................................... TAGTGTATGAGGCCCAACGGGCGAAGTTGCCGCTC 19844 37 100.0 37 ..................................... ACCAAGAAAGGCGCTCCTGCGGATGCAGGTGCGCCTT 19770 37 100.0 36 ..................................... ACGAGCGGCGGCGGCGGGCGGGATAGAATCGACTGC 19697 37 100.0 35 ..................................... TTGCGACGGATGTACGCTTGCGCGTTGCCGTCGGT 19625 37 100.0 36 ..................................... TTGAAGGTGTCGGTGTCGGCGGCGGTGTCGGCGTCG 19552 37 100.0 36 ..................................... ACGGCAGAATCACGCCCTGGGTGTTGGTGGTCTTAG 19479 37 100.0 37 ..................................... GCAGGGCGCGGCCGTTGTTCACGAGGTCGAGGCCCAC 19405 37 100.0 36 ..................................... CAGTGGTGGGCCAAGGATGGCACGGTCGGCGGTGTA 19332 37 100.0 37 ..................................... CCTGGAGCGAGGTTGCGTTAACGGGGGTGAGCGGCGA 19258 37 100.0 37 ..................................... CACCACCCCGACCTTGCTGACGACGCTCAGCGGGAGC 19184 37 100.0 36 ..................................... AAAACGCGGGCGGGTCATGGGCATCCAGGTAATTTT 19111 37 100.0 37 ..................................... CCTGGACGGGCATCACGCCGCCGCAAGCAGGATGGTC 19037 37 100.0 35 ..................................... ACGCAGCCATTCGACCAGACGGGCACGCTGATCAT 18965 37 100.0 34 ..................................... TAACTTTCGATAGCTCGCCGAGATTCCGGATAGG 18894 37 100.0 36 ..................................... GGGGAGACTTTCTGGAACAGCTTCAAATAGTCCTGG 18821 37 100.0 37 ..................................... ACCGACGGCAGCTGGGAATGCGGGCGACCATTTAACT 18747 37 100.0 36 ..................................... TCGGCGTCCTGGAAGATGGGAAGAGGCTCTCCTCCT 18674 37 100.0 33 ..................................... AACATGATAAAGAAACAAAGACGGTATAGGCGA 18604 37 100.0 37 ..................................... GCAGTACCCCCTGGTGGAGGTGACTGCGGGGGCGGTT 18530 37 100.0 35 ..................................... TTATCCCATCCTTCGCGAGAAACGCGTACGTTCCG 18458 37 100.0 35 ..................................... TCAACGCTCTGCCCTCCACCAGGAGACTGACGCGT 18386 37 100.0 35 ..................................... AATCATGCCACTTCCCACAGTCTTCGCAGAACATC 18314 37 100.0 37 ..................................... CAAACGCCTCCCTCTGCGAGTTCGGCCAGCGCTACGA 18240 37 100.0 36 ..................................... CATAAGAATGAATAGGACTACTTTCTTGTATAGGTG 18167 37 100.0 36 ..................................... GTGAGAAGATTGTCGCGATACTCACAGCCAGCGAAG 18094 37 100.0 36 ..................................... AAAGTGGTTGATACCATAGCCCATGTGGTTCATCTG 18021 37 100.0 35 ..................................... TCGACGGGGCGGTGCCGCTCTGGGCGTGCTAGCTA 17949 37 100.0 35 ..................................... ACGGGTGGTAATAATCTCACCGGACGGTGAGGCGA 17877 37 100.0 36 ..................................... TTTTCCAATTCACCACCAACCCGTCGGCGACGCTTA 17804 37 100.0 34 ..................................... AATGGTAATCTACCGTACGCATCAGCAGATATAC 17733 37 100.0 36 ..................................... CTCAGTCCCCTCAGGTTCTGCTCCCGGGGGAGGTTG 17660 37 100.0 36 ..................................... AAGGAGAATGGTTACTCCACTCGCCCCAGAAGCCGA 17587 37 100.0 36 ..................................... ATGGTCTGTAGATTGGTGTCGTTGCTGACAGCGAAG 17514 37 100.0 35 ..................................... CGCCGTCGGCCAGGATGGGCAGCAGCGCGAAGAGC 17442 37 83.8 150 ......C..............C..C..C..G..C... GGGCGGTAGGGGCACCCCTTGCGGGTGCCCCTACCGTGCGGGCACCCGCAAGGGGTGCCCCTACCGTGCGTGCGGGGGTTCCGGTGATGGCGGTCGTTGTTTCGTGCGCGATGAAGGTGCCCCTACGTGCGTGCGGGGGTTCCTCTGGCG 17255 36 75.7 0 ......C.............C-........G.ATTGG | ========== ====== ====== ====== ===================================== ====================================================================================================================================================== ================== 87 37 99.5 37 GTGACGACCAACGCCCCGCAAAGCAGGGGGTCGAGAC # Left flank : ACCTCCCCGCTATCATACGTGCCACCGCGTGGCGGCTCGACACGCTCGCCCTCTTTCATGGCGGGGGCGCGTGGGGCGTGAACCATCACGAACTCGCCGAGGCTGCCCGGGTGATCAAGCTTGAGCGCGAACACGTTCGTTGGGAAGATCGTGAGCGTCAATCGGATGGGCGACACGGGCGGCAGCGCATGCACCTGGGGGGCTTGGTAGGCAGCGTCATCTTGCACGACGTACCACGTGACCTCCGCACCCTGCTGGTCGCAGCGAGCATCATCCAGATAGGCAAAGCCTGCGTCTTTGGCAACGGGGTCATCGACATCAGCGCAATCAGCGACTTGCCCTTGCACAACCACCAACCACCAGCTAAAATGTAGTCAAGCGCAGGGTAAACCACAGAATCAACCCATTTGGCACATTGACAACAGAAAGGTAAGCTGTTGGTCAACCCCGGTAAAATCCACTCCAACGCCATAAACGCCAGATGGCCGGGATGCGACCCA # Right flank : GTGGCAAAGGCCTGTGGGCGTAGCAGCAATCCCGTGGGACATTCGTCTAATGGATCAGCTAGGCTGCTGCGCCCCTACATCTATGATTACGCCAGATGCGCCCGCAGGTGGGGGGTGGAGCAATCCAGGGGCGCATAGTGTCACCAGCGAAGTTGCCTCGCCAGCAATGCTACTTCCCGCCCAACCCCGTAATCGCCGAGCGGCTTGCTTCGATGCCAAAGCCCCAGGCGAGCAGGGTGGCGTAGTCGGTCCAGAGGTTGGCCCCAAAGGTGGCGTTGTTGCCGTAGAGTTGCCCGAGCCCTACCAGCGCAAGGAGGACGAGCAGAAAGCCTGAGCTGAGCCAGAGTTCCCCTATGCGGCGTCCGCTTGCGTGCTGAACCTGGGCTTCTGAGGTGGTGACCGGGACAACCGAGGGCATCGTTGGCATGGTGAAGATACCAGGTTGTACGCCTCGTCCGCCGCCAAGGACAAAGGGTGCCTCCGTGGCGTCGGGTTCGGGT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACGACCAACGCCCCGCAAAGCAGGGGGTCGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 39854-40710 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYFF01000039.1 Candidatus Chloroploca sp. Khr17 NODE_57, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 39854 37 100.0 36 ..................................... ATGAAGGCAATGATGGCCTGAGTGCCGAAGCGTTGT 39927 37 100.0 36 ..................................... TCGCGGTGGCTGTCGCCGTCGCTGTTGCCGTGGGCG 40000 37 100.0 37 ..................................... AGATAACCTGTGCGGCGCTGGCGCCGGGCAGGTGAAG 40074 37 100.0 39 ..................................... TGTAACCTCGACCTGCGCCTGGTTGGCGCTAGGTGCCTC 40150 37 100.0 35 ..................................... TAGACCTGTGGCAGCAGTGAGGCTTACGAATGGAG 40222 37 100.0 37 ..................................... TTACATGTCAACTTTAATATTCAGCATTTTAAACAGC 40296 37 100.0 42 ..................................... CATCGTGGACGCATTGATGATGATACGCTGCGCCGCCAGGAG 40375 37 100.0 36 ..................................... CTGCGTGCTGCAACGCGTCCGAGACATAGAAATCGT 40448 37 100.0 36 ..................................... TTCAAGGCTCTCAGAGAACAATCATCACATAACCCA 40521 37 100.0 37 ..................................... CGAGCCGCCCCATCGCGACCATGAGCAGGGCGGCGAC 40595 37 100.0 37 ..................................... ATAATGTTTTCAGTGCTCGTATAGAATAGTAGCGGCG 40669 37 94.6 0 .............................T..G.... | GA,G,T,A [40695,40702,40706,40708] ========== ====== ====== ====== ===================================== ========================================== ================== 12 37 99.5 37 ATGACGACCAATGCCCCGCTGAGCAGGGGATGACGAC # Left flank : GACGACCACGAGGAACGCCAGCCACGCCAGCGGCGCACCGTGCAGCATCAGAGAGACCTCCCCGCAGTGCAGGGGATGACGACTCAACCTTGCAACTCGTTTTAACCCCAACGTCCATGCCAATCAGAGAGACCTCCCCGCAGTGCAGGGGATGACGACGCAACCCATTGTTCGATGACGTGCAGGATCGTTTGCATCCATCAGAGAGACCTCCCCGCAGTGCAGGGGATGACGACTCGAATGAGGTGACGGGAACGAACTCGGAAGTGATCACTCCATCAGAGAGACCTCCCCGCAGTGCAGGGGATGACGACCTGTATGAATCGACCGTTGCTGCGTCAGAAAGCACTGTATCAGAGAGACCTCCCCGCAGTGCAGGGGATGACGACCCTCCCTCTTGGCTTCGAGATCGGCAAGCTGCCTCCATCAGAGAGACCTCCCCGCAGTGCAGGGGATGACGACCTTAGTTCTTCCGATTGGGCGACCCGAGGTTTTTACCA # Right flank : CATAACGCAGCGACGCCGCTTCCGCGACGGTGACACTGAACATAACGACGGCTTTTTTGACGCATCTGTGCGCAGATGCGCCTGGCACGCGAGGATGGTGTCTACGTAACAGAGGAACAGCAAACGCAAGAGCCGTTGCCGTGGACGCGCCTCCTTCCTTGCCACGGGAACCCCGTAGCGGATGCCACGCTCCTCGTTGCAGATGGTCGGGTAGAGGCCCTCACCCGTGCTGCGCGTCACCAGCCGCATGCATCGCTCTCGTGTCCCAAGGTGGAGATCGTGAACCCTGGCATGTGGCCGCAACGAACGTCGCTCATCGCATCCAGAAACGGCGTCCGCATGCGCTCACGAAACACGCGTGACGGCAAAGCCCAGGCTTGAGGCACCTTGAGGCCAGTGCCACGAAGCTCGGCGCACGGCCTCTTGGGGGCGCGGCTCGCGAGGGTTGCGCCGAAGGCGGTGAGGGGCCACGGGGCCGACGGGTCGTCGTTCCCTGCTGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGACGACCAATGCCCCGCTGAGCAGGGGATGACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.00,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 1778-64 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYFF01000099.1 Candidatus Chloroploca sp. Khr17 NODE_230, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================= ================== 1777 37 100.0 37 ..................................... CTATCCACGGGCTGCGGCACCGTGAGGTAGTCAAGGC 1703 37 100.0 49 ..................................... ATACTCCGCAGCCGTGCGTCTACAATGTGCTTGCCCATCACTGCCCTCA 1617 37 100.0 35 ..................................... TTGCGGTGCACCTCAATATCTCTAAAGGTTCAGTG 1545 37 100.0 36 ..................................... TAGTAGGCGTGATCCAGGGCAAGAGCCCTGGGCAAA 1472 37 100.0 40 ..................................... CTCGTAGCGGGCCAGGTCGCACGCCAGTACATGCACCTGG 1395 37 100.0 38 ..................................... CTTGTGCGGCGCTCTTGACAACACTAACGACCGTCAAA 1320 37 100.0 39 ..................................... ACTCGGCGTGCCCATCGCGGGCGGCGGCGAGCAATTCAC 1244 37 100.0 38 ..................................... CGATGGCGAGGGACAGTCGAAGGGAGGAGTGCGTGAAG 1169 37 100.0 40 ..................................... AGAAGTAATTGAGCACAGGAGACACGGCAATGACACGATA 1092 37 100.0 38 ..................................... ATACATTGCAGGGCAAAACATATGCCTTGCATGTGACG 1017 37 100.0 37 ..................................... GAACCTGGGGGCTTTACCCTCAGCAAACGCCCGCAGA 943 37 100.0 40 ..................................... TCTTTGAGGTAGACGGCGACCGCTCCGATGGACAGGTTGG 866 37 100.0 38 ..................................... TTTACGGTGGTACGAGGGCGCACCAAAGCACGCCCTCA 791 37 100.0 48 ..................................... GTCAAGGTCGGCAGCAGTTCCCCGTGTTCCTCCGTTTCGACTGTCCAA 706 37 100.0 41 ..................................... ATCCTCAACTGGACAACGCCCGCGATCCAGCAAGAGCGCAC 628 37 100.0 38 ..................................... TGGTTCTAAGGGCATGAAAGGCGCTCGTTTGCCTTGCG 553 37 100.0 38 ..................................... CAGAGTACGCCTTCCTCTACCGGTTCGAGGACGGGGTG 478 37 100.0 35 ..................................... TTAACCACGTTGTAGACAGCTTCTGTCAACGCCAG 406 37 100.0 38 ..................................... CTCGTCGTCATTTGCAGTGATGCGCGTCATTTCTCTTA 331 37 100.0 39 ..................................... GGCGCTCATTGCCGTGGATACCACGAACGTCCCAGTTTG 255 37 100.0 40 ..................................... TCAAGAGTGAAATGGCCCAGCCTGCCAATAATAACCCTGC 178 37 100.0 40 ..................................... AGCCTATGGCGGCCACGGCGATCACTGGCAAGATCGCGGT 101 37 86.5 0 ...........................A....GT.CA | G [66] ========== ====== ====== ====== ===================================== ================================================= ================== 23 37 99.4 39 ATCAGAGAGACCTCCCCGCAACGCAGGGGATGACGAC # Left flank : GCGGTCATCGGCTCGGGGCCACCGGTTGAAACGAGCCCCGACTTTTACCTAGTCTAGGGGCAATCCTTTGCGAAGAAGGCGGTTTTTTTGACGCAAAGGCGCAAAGGCGCAAAGGTTTTCGCGTCGGTACGAACCCTTCGCGCCTTCGCGCCTTCGCGTGAGCTTCTTTTTTCGCGGAGGCGAGCTCACCCTTCGCGCCTTCGCGCCTTCGCGTGAGCTTCTTTGAAGCGTCGTGGGTCGAGGGGCACGGTCTTTCAAGGTACACCAGCGAGCGCGAAGGCAACGGCGCAAAGCACAACTGAGGGTCGCGACACCGGCAAAAAGAGGCGTCGCGAGCCGTCGCCATACGTCTCATGCCGCGCAAACGCATCAGGAAGGGCTAAAACGGCCTTGGAGCAACCCAAAACAACCAGAAACGCTTTACACAAAACGCCCAAAACAGCCCAACCGCGCAACCACCCCCGATTCAGGGCTTTGCAACGCCCCAAAAATATGCTACT # Right flank : AGAATAGGGGCTGCCATCTGCCGAGCAAAGGCCAAACGGGGTCGCCAACAGGGGGGGGCCGCGC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCAGAGAGACCTCCCCGCAACGCAGGGGATGACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.60,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 1845-5765 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYFF01000111.1 Candidatus Chloroploca sp. Khr17 NODE_285, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 1845 37 100.0 36 ..................................... GAACGGTAACCTTGCCGTCCTCACAGGACGGCTCGG 1918 37 100.0 36 ..................................... ACTGCGCCTTGTCGTTGTCGAGTAGCCGCTGCTCGG 1991 37 100.0 36 ..................................... TATATCAGACCAATTACTGGCTCCTGTGATATTGGC 2064 37 100.0 36 ..................................... ATGCGGGCCTCGTACTGCGCCTTGTCGTTGTCGAGT 2137 37 100.0 36 ..................................... ATCCGCGTCCACCTCATACTGGAACAAAAACCAGCA 2210 37 100.0 37 ..................................... ATTGGACCTGGTGGCGAGCCGAAGCTCTCCCGTGATG 2284 37 100.0 37 ..................................... GACCCTTGGGTCGGCAATTACGGTGGTCTAGCGCCAC 2358 37 100.0 38 ..................................... ACGCATGATTAACTCTCCCCTGCTCTTCGGCTGGACTT 2433 37 100.0 36 ..................................... CGGGTGAGGCGATCTGGGTCAGCGTGACCACAGCGC 2506 37 100.0 37 ..................................... ACGGTCGAAAACACCACCCACAGAATCCCCAGAATGA 2580 37 100.0 36 ..................................... ATGGGGGGCTCCCTTTTACAAAAGAAAACGATTCAG 2653 37 100.0 35 ..................................... GCGTCGGCTCGTCGCACGGCACGTCCACGTCCCAC 2725 37 100.0 36 ..................................... ACGATCTCCTGCTGGGACTGGGCGCTTCTGCTGGAG 2798 37 100.0 37 ..................................... TAGTCTTTGCAGACGATGAACAGTGACACCACTACAG 2872 37 100.0 37 ..................................... GGGGCGGGCTCTTCCTAACTGCCGATGCCGAGGGCAT 2946 37 100.0 37 ..................................... ATCAGCTTCCAGGCGGCCTCGGCGATGGTCATGGCCC 3020 37 100.0 35 ..................................... GCGCATTGGGTACGGCAGAGGAGAGTAGCCCTATT 3092 37 100.0 36 ..................................... TCGTCGGCGGCGTGCAGTCCCACGTCACTCGCACTT 3165 37 100.0 37 ..................................... AAGCTTAAGAACCCTGCGGCCGCGATAATCATTCCCG 3239 37 100.0 36 ..................................... CATCTTCCGGTGCCAGCGGCAAGGTCTGCAAAGGGC 3312 37 100.0 36 ..................................... ATCGACACCTTGCCGTATAGCTTCATAGCTGCCCGG 3385 37 100.0 35 ..................................... GGGAGTATTCCCCTCCTCGATCCAGAGGTCGTTAC 3457 37 100.0 35 ..................................... CCGATCAGTATGATCCGAACGACGTCGCCGGCCTT 3529 37 100.0 35 ..................................... GAGGCGCCCCACTCGGGGGCGCCTCAACATTTGTG 3601 37 100.0 36 ..................................... TGGAGTGCGGGGTTTGGGGGAGTGTCAGCTGCTCGG 3674 37 100.0 36 ..................................... GTTGCGGCGGCGGCGGCGGTGGGGGCGGTGATGGTT 3747 37 100.0 36 ..................................... CTGTTGCGCCTTGACCCTGCCACGATCGGCCTTGTT 3820 37 100.0 38 ..................................... GCTTCTGAACATGTACGACCCTGAGGACCCCGAAGATT 3895 37 100.0 36 ..................................... GATATGGAGCATCAGCGTGCGAACAAAGTCGATCTT 3968 37 100.0 37 ..................................... ATTAACCAGGGATGGGCCATCGATGCTGGCACTCGGC 4042 37 100.0 35 ..................................... GAGAAGCTTGATCTGGCCTCCGGAGTTCTGCATCA 4114 37 100.0 36 ..................................... CTCCTCGGTAGCGTTCCTGAGAATGTGAGCAATGGC 4187 37 100.0 37 ..................................... GTGGTGAATGCGGCGGCGGTGGTCTGGGCGGCCGCGT 4261 37 100.0 40 ..................................... TAACCACACAACGTCGGCCCTGAACATGGTTAAAGCGATA 4338 37 100.0 38 ..................................... AATTTTTACCCGAACCGGCCGTGGCCCTTGCAGCGATT 4413 37 100.0 36 ..................................... CCCTGAGACGCCGGTGATCGAGACAGGCCACTCCAG 4486 37 100.0 37 ..................................... CCCGAATGGCGAGCTGGAGTGGCCTGGCACCGCTGTC 4560 37 100.0 35 ..................................... TCGGCCTTCGCTGCCGGGGCCAACATCAGGGCGCT 4632 37 100.0 36 ..................................... ACCAGCTCGCCGTCGATGACAGCGGTGCCAGGCCAC 4705 37 100.0 36 ..................................... AGGAAGCTGCCCCAGGTGCCGTACAGGCCGTAGCCG 4778 37 100.0 34 ..................................... GCGCAGGATGTTGCGCATGTTACACCTCCAGGTG 4849 37 100.0 43 ..................................... TCGATCACCGGCGTCTCAGGCGTCTCCTCGCAGAGGTCGCCGT 4929 37 100.0 35 ..................................... GCGCTGCGATTATTCGCAGCGGCCCTCCCCCATTT 5001 37 100.0 36 ..................................... GACGAGGTCCGGTCCTTGCTGCCGATCTGCGGACGC 5074 37 100.0 33 ..................................... TTGGACTCGGTCTCCTGCCACTCGCGCAGGATA 5144 37 100.0 36 ..................................... CTTCTGTAAACCGAGCAGGAACGACACATCGTCGCC 5217 37 100.0 36 ..................................... ATAAACCTCCCCGGGAGGACAATCGAAAAAGTATGC 5290 37 100.0 36 ..................................... CAATAGTCCTGGGAGGGTGCAGGCATTCTCTCGATA 5363 37 100.0 36 ..................................... TCGGACTTCCTTGGCTTTGTCTCTCGCCTCGGACTT 5436 37 100.0 38 ..................................... CCGGCCTAATTGCCCTTGGAATATCGTCCTCCAAGGAC 5511 37 100.0 36 ..................................... AAGCGGCTTTTCTTTTGTGGTTATGGTGCTTTATGT 5584 37 100.0 36 ..................................... TCCTGGTTCAATTTCCATAAGACCTCCGTCTTACAT 5657 37 100.0 35 ..................................... CGGATGCCGAGGCCGGAGACGATCAGGGTGGCGAT 5729 37 83.8 0 ...........................A.AG..GTG. | ========== ====== ====== ====== ===================================== =========================================== ================== 54 37 99.7 36 GACACAAAAAAAGCCCCGCTTTGAAGGGGTTTGAAAC # Left flank : CAGCCCCCCGCCCACGTGCGGACGATCTCGGCGCGCACCAACTGCTCCAGCGTAAAGGTCGGCGGCGCCCCGGGTGCGCCCTCGGGATGGCGATAGGCGGCACAGGCCGCGACCACCGCCGCCGGATCATAGGCCAGGCCGATGCGCACCAGGGGATGGTCGCGCACCGTCGTCGTAAAGATCCGCCGGAGGATGGTCGTCTCGGCCCAGACCAGGATCGGGCCAAGGAACATGATGATCCCGGCTTGGAGCCAGCGCGGCACGGCGGGCAAATCGGGCGTGCCAGCACGGAGGATTGGTGGTAGAATAGGGAGCATAACCGTCTTTTTTGTGTGTTTGATGCGGTTTTTACACTACAGTCATCATGCCACAAAAAGGCGGTTTTTCAAGCCCTCACCGTGGTGATCCTTCGCACCCCGAAAAGTTGCCGGTATTCTGCACCAGTCTCTTGAAGGGGTTTGAAACAAACTTTGCGGTATTCTTGTTGCGTGAAATACGAG # Right flank : AGAATAGGGGCTGCCATCTGCCGAGCAAAGGCCAAACGGGGTCGCCAACAGGGGGGGGCCGCGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACACAAAAAAAGCCCCGCTTTGAAGGGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 759-65 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYFF01000027.1 Candidatus Chloroploca sp. Khr17 NODE_30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 758 37 100.0 36 ..................................... AAGCGCGCGACATAGACGGATGTGAAACCAGCAAAA 685 37 100.0 36 ..................................... TTCATCTGTTGGAAGCTGGCGGAACAGATTGAATGC 612 37 100.0 37 ..................................... GCTTCTGCGTACGGTAGAGCTTGGCCGCTTCAGGGTA 538 37 100.0 38 ..................................... GTAGTCACCTGAACCGCCATTCGCCGAGTCGTCGACAA 463 37 100.0 36 ..................................... TCGTTAAACTCATCGGGGGTGTGCCCTGACACCTCC 390 37 100.0 35 ..................................... CGAACGTGAGATCGTACGGCGTAATCGACAGTCAA 318 37 100.0 34 ..................................... TCCACCGAGCCACAACAATATCCCACTCATAAAG 247 37 100.0 36 ..................................... TTCGCGGCGGCACTCGATACAGCGACCGCTGATGCC 174 37 100.0 36 ..................................... GATGCCGGCGTTCACAAGCCGATAGGCCCACTCATA 101 37 83.8 0 ...........................A.AG..GTG. | ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 98.4 36 GACACAAAAAAAGCCCCGCTTTGAAGGGGTTTGAAAC # Left flank : CAACAACCATCCTGCCAGCACAAACAACTCGGCCAATGAACGAGGTTTCCGATCCTGACGGAGTGCAGCGAGCGAGCGAAGAGGGCCATACCGTGATGTCACTGCCTGCATCGACAACGTACGTGGCTCGGCCCGGAGCATCTGAGCGGCAGCCTGCGCCTCAGCCGACAACGAAAAATAGACCGCACGCACCGCCGCAGGGCGACACAGTGCCCGTCGGACGCGAAGCAAACACTCATCACGCGAGCCACGGCGCGACAACGACACCCGCTGCGATGCCGCAATGAGTCGTAACAGCGCCACCGGAACATCTGCCAGATACGAAACCCAGGCTTGCATCTTGCACTCCAACCAGTCACCTGCTAAAATGTAGTCAGAGTAAGTATACACCCTGCAGGATACCACATGAATAACATTGCATACAGTTTCACCTGCTCCTGGTTGCACGTCAAATGACGCACTGCAATCAACTCTATCGCCCCAGCCCGGGACGCGACCCA # Right flank : CAGAATAGGGGCTGCCATCTGCCGAGCAAAGGCCAAACGGGGTCGCCAACAGGGGGGGGCCGCGC # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACACAAAAAAAGCCCCGCTTTGAAGGGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.90,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 42687-36802 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYFF01000028.1 Candidatus Chloroploca sp. Khr17 NODE_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 42686 37 100.0 36 ..................................... AGCGCTTCAAGCGCTCAGGCGTGGCACGTTCGAGCT 42613 37 100.0 35 ..................................... TCGCTTCGTATCGCGCAATGAGGATATCTAAACAG 42541 37 100.0 34 ..................................... TCCCGCTCGCCCTCTAAGGTGCGGATGGTAACGC 42470 37 100.0 36 ..................................... TCGATAGCGCCTATGGCCTTTTTGGTTAGCGGTTCG 42397 37 100.0 37 ..................................... TGCTATGGCCTAATTGCACCTGAATGCCCCGTAGGTC 42323 37 100.0 36 ..................................... GGCTTTGTCGCCAGTCGGCGGTTGAGAAGGCAATGC 42250 37 100.0 36 ..................................... TGAAGAGCAAGTAATTGATAGACAAAGGACACGACA 42177 37 100.0 37 ..................................... GTGCGTTCGCTGGCGTCAGGCAGCGGCGCGATCCTGG 42103 37 100.0 36 ..................................... AAATACGCATACCAATAGCCGCCATACGATGGATTC 42030 37 100.0 38 ..................................... TTAGCCATTATTGGTACAGTGCTTTCATGGCTTTCTGA 41955 37 100.0 35 ..................................... CTAGAATAAGTGCAAATAGTCCGTCCCTGCAAAGG 41883 37 100.0 36 ..................................... ACAGCAGGCGCGTCGCAATGCTCTCGGCACTGGCGT 41810 37 100.0 38 ..................................... AACGACCCGACGGCGCCCGATGGCCGCCGCTTTGAGCC 41735 37 100.0 36 ..................................... GCAGCAGCAACTGGCAAGTGAGCAGGTGAAGCTGTC 41662 37 100.0 37 ..................................... TGATCCGGATCTGGCAACGGTGTACCGCGCCAACCTC 41588 37 100.0 36 ..................................... CGCCGCAAAGGCATTGACCGCCAGTTCAGCGCCCGG 41515 37 100.0 37 ..................................... CACGTACTCAATCAGGCTGTTGCTATATTCATACGTG 41441 37 100.0 35 ..................................... AATGCCTTTGCGGCGCAAACCTTCCAGATCGAGCA 41369 37 100.0 35 ..................................... GATTGTGCGAGCGTCGCGGGACTTGTTGCCGAGCC 41297 37 100.0 36 ..................................... CGGCGCAACGTGACGGCGTTTTGCGCGGGCAGCATC 41224 37 100.0 36 ..................................... ATGTCGTTCAGCGGGGTGGTCGCAATGTCACTCCGC 41151 37 100.0 37 ..................................... TGTTGTTTACCAATAGATCGGCAGGTGAAACGCAGCA 41077 37 100.0 34 ..................................... CTAACGAGCACGCCGACTCGCACCGCTACGAACA 41006 37 100.0 35 ..................................... AAAAGCGTAACTTCTGCTCGGGCTGCTAGGGCGCG 40934 37 100.0 36 ..................................... GAGCTGAGTCTCTAGCTCAAGCTCTGGCGTCCAATG 40861 37 100.0 36 ..................................... CATTGCCGCCAGCAGCTTGGCATCCCCAAACTCTTC 40788 37 100.0 36 ..................................... TACGCTCAGAGATCGAGGATGGAGGTTTCGTTCACC 40715 37 100.0 36 ..................................... GTATACTAGTCACAGAGAGAAGAAGTCAAGCAAGGA 40642 37 100.0 36 ..................................... TTAATACCAATCTGGCTGCTGATGGGTGGACAGGGT 40569 37 100.0 36 ..................................... TAGGAGCGATCTGGTATGTAGGAAGGAGTAACCACA 40496 37 100.0 36 ..................................... GCGGCTTTTGTCAATATGCCAACGACGCCGCTCCAG 40423 37 100.0 37 ..................................... CGCGGTTCGTCAGCAAAGGTGAAGCGCCAGCCGTCAG 40349 37 100.0 36 ..................................... ATTCTCTCGGATGGGTGAAGGAATCAGATCCAGCGA 40276 37 100.0 37 ..................................... GACAGCAAAAAGCTAGCATCATTTGAAGCTAGTATGT 40202 37 100.0 36 ..................................... TCATCGCCATGTTGGCAAGAACAAATGATGCATCGA 40129 37 100.0 36 ..................................... GGTCTAGAGACCTGGTAGCCGTACCAGGTAGGTCTA 40056 37 100.0 36 ..................................... AAGAAGGATTCTCGCTTGTGGCGCTTGACTTGACAG 39983 37 100.0 38 ..................................... TCTCGGCTGCATTACATACCAGAGACACATGCTGAAAG 39908 37 100.0 39 ..................................... AGCAAGGCTATTCGTTCGAATCCGGCGGAGATTCGAAAA 39832 37 100.0 37 ..................................... GGCACGCTCTAGGCGCTACAGGCGCTAGCCTGACCTG 39758 37 100.0 35 ..................................... GCTACCGTCTACGGTGATCCGCCCGTGCCAACGTA 39686 37 100.0 37 ..................................... CGCCCATTTCGTTTGACAAGCCTGTCCCGACTGCTGA 39612 37 100.0 38 ..................................... CTGTTTGTGACAGGCATTCGATTAGCGGAAAGCGCCGC 39537 37 100.0 36 ..................................... CTCACTACTACCTGAACCGGCCCGAAGGGATTGAGC 39464 37 100.0 37 ..................................... CTTGCTCAAACGATCTCGGTTCCGCAGCGGGCTGCTA 39390 37 100.0 35 ..................................... ACGTGACACCGAACGCGAGGAGGTTGCGGAAATGA 39318 37 100.0 36 ..................................... CGAGTAACGGGTAGCGGCGGCCCTCCTGGCCTTTGA 39245 37 100.0 36 ..................................... TATCTCTACCTCAGTGAAACAAGCGAGATCAGCAAC 39172 37 100.0 37 ..................................... AAAATGGAGGCTGTGCCCGTGGGATTGGTGGGATTGG 39098 37 100.0 37 ..................................... CTGACGAAACGCAGCAACCGCATCCGCCAACAACCGC 39024 37 100.0 34 ..................................... CTGTGGAAGGCTGAAGGGGCGAAGGGCACGAAGG 38953 37 100.0 36 ..................................... CTGAGGTGCCAGGGTAGGGATACTGCGACCGACGTA 38880 37 100.0 36 ..................................... TTGACGCCCTTCAGCGCCGTACTGAGGATGGTGCTC 38807 37 100.0 35 ..................................... CCGCCCGAGGTGCCAATGGCGATGGCGGAACCGCT 38735 37 100.0 37 ..................................... TCGCCTGCGGCCCGAGCGGACGCAATCTGCGCCGTCA 38661 37 100.0 35 ..................................... TGGGGCGCTGGCGGCCACGGCAGGCTATCACCTGC 38589 37 100.0 36 ..................................... TGTTTGATGCGCCTGAAGCTGAACTTGGTTTGTGCA 38516 37 100.0 36 ..................................... GGCAAGCAGTTTGTTGAGGATCTGCAAGCGCCACTC 38443 37 100.0 34 ..................................... CAATTGTACAGTTTTTTAAATCATCAACCACTGA 38372 37 100.0 38 ..................................... TCATCCTTCCCGTGGCGCTTACTCCGCCACGCTTGCCC 38297 37 100.0 35 ..................................... CAAGCAACGTTGGGCGTGTGACTTCGACAGGTGTG 38225 37 100.0 34 ..................................... TTGACCCGCTTAACGATCCGTGCGGTTCGTGCCA 38154 37 100.0 36 ..................................... TTTTTTCCCTCTCAAGGCGGGCCGATAGTTCCTCTA 38081 37 100.0 36 ..................................... ATCATGTCTGCTCTCTGGTCGCTGCTCTTCTGCCTG 38008 37 100.0 38 ..................................... TCTGGGACGGGCTCGAATGGTTCCGTGCGACGCTGTGG 37933 37 100.0 36 ..................................... CTATCAATGTACTTTCTGAGATCGTACGTTGAGGCC 37860 37 100.0 34 ..................................... AGATACAGTGTCGGTGCGTATAAAACCCACTCTA 37789 37 100.0 36 ..................................... CTGTGGCAAGGGCCCTGGGCGACGGCGGCGCAACAG 37716 37 100.0 36 ..................................... TTGCGATTGATCAATGTCGTGAGCGCGGCATGCTGA 37643 37 100.0 36 ..................................... GTTCGGAAGACCCAATTATGGGGGGGGTTCGTACCT 37570 37 100.0 36 ..................................... GTCCAGCTTCTTCTTTGACACCTCGTAAACACTGGC 37497 37 100.0 37 ..................................... TCGCAAAGAGGGTCGTTCTTATACTACAGGAGTTCGC 37423 37 100.0 36 ..................................... TTGCGATTGATCAATGTCGTGAGCGCGGCATGCTGA 37350 37 100.0 35 ..................................... TGCAGAGGAGCAGGAGCATTACTGTTATAGGCCCA 37278 37 100.0 36 ..................................... CGACTCTAGGCTCCGCATCCACGCCCTTTGATGGGC 37205 37 100.0 35 ..................................... TTGATTGAAGAAATGGCACGCCGGATTCTGTTGCA 37133 37 100.0 36 ..................................... ATGTCAATGCGCAAGCATCGGTAGTGTGCCTGTACG 37060 37 100.0 37 ..................................... TAGCCAACTGCCCTCAAGCGCCTGTCCGCTCGCCCGG 36986 37 100.0 37 ..................................... CCCATTTCTGATCGTCCTGATGCCCTGGAAGTGGAGA 36912 37 100.0 36 ..................................... ACCCTACTCGTCGCCCGTTGCCGCGCAATCCATAAG 36839 37 83.8 0 ..........................G..G...GGCT | A [36808] ========== ====== ====== ====== ===================================== ======================================= ================== 81 37 99.8 36 CTTCGAAGACAAAGAAATCCGCACTGCGGATTGAAAC # Left flank : TGGCAATAAGCAGCGAAAGCATGCTCTACATCATCGCCTACGACATACCTGACAACAAACGGCGTACCAAAATCCATAAAACCCTTTGTGGATACGGAGCGTGGACTCAATACTCTCTCTTTGAATGTTGGCTAACACGGCGCCAACTGCTCGAGCTACAGGCAAAACTCGCGCCACACCTCAACAAAGACCGCGACAGCATCAGGCTCTACCCACTCTGTGGAGCATGCCAGAGTAAAGCGATCACCATTGGAGGTTCGCCTCCACACGATCCCATAACGGTTATTCTTTAGAGGGCAGACCCTTGCAAGAATCGAGCAGCGAAGGATCAGCAAAAACCCCAGGAGTCACTCGCATGAAGAGATTACTGATTGCAAAGCCATCCAGACTATGCTACACTTCCATATATGCGCAACCCAACCACATCAAGACATCCCCAGCAAGCAGGCTCTCGCACCAGAGCCATTCTATCCCTTCCTGATGCGGTCACGAGTGGCGGG # Right flank : CAACACAACGCAGCGACGCCGCTGCCGCGACGACGACCCTGAACATAACGACGGTTTGTTGACGCAAGTGCGCGCATATGCGCTCGGCACACAAGGATGAAACCGCGCGGGGGGGGAAGGTAAGGGCGAGCAGCGCAAGCAACGCCACCACATCGAGGCGCAAACGATCACTCACCCGTCATCATGCTCGCCTCACACGGACATCAACACGAAAAGCCCAAAGATATCGCCCAGCAGGTGCGCCAGCCAGACCACCCAGAGGTTATGACGGCGGGCAAACATGATGCCATACAAAATCGAATCGACAATAATTAGGCCGATGTCCGTCAAAACGATGAGTCCCGGCCCGGGGGCAAAATGCGCCAATCCAAAGAGGAGCGAAGCCACCCCGATTGCGGCTGGAGTTCCGATAAATGGGGTCAGCCTGCCCTGAATGAGCGTCCGGTAGGTCATCTCCTCGCCGATCAGGGAAAATGCCAACAATGGCAGCAAAACACCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCGAAGACAAAGAAATCCGCACTGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.10,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //