Array 1 485164-485664 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018622.1 Virgibacillus dokdonensis strain 21D chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 485164 32 100.0 34 ................................ TAAAATCGCTTTTACATCATCACCTTGACTAAAT 485230 32 100.0 35 ................................ ATAAAAAGATAATATACAGCATGACCAAACGTATC 485297 32 100.0 35 ................................ GATCACCATAATAAACTGTTTCAAAATCTCCACTA 485364 32 100.0 38 ................................ TATGCAAGCAAAAATTAATACGTTCTTTATTTCACAAG 485434 32 100.0 33 ................................ AGTATTATTTTTAAACAATATAGTATTTTGAAA 485499 32 100.0 35 ................................ TTCAAACATTTATTAGCAAAGGCTTTTCGTTCCCT 485566 32 100.0 34 ................................ ACTTTTGGCATTAATATTGGTCTAAGAATTAGCG 485632 32 78.1 0 ..........G..........CCA....GG.C | A [485653] ========== ====== ====== ====== ================================ ====================================== ================== 8 32 97.3 35 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : TGACTGTATCTTCAGGCTATCCATTATTATCATCATATCACAAATAAAATTTAAATGAAATTAATATTTAGAAATGTTTCATTTTTCTGTAACTTAATTTCATAAAACATATAAGTATACATAAACAAGTGGTGCTTGATTAAACCTTTTGTGAGAAAATTACTTTCTACAGTAGGTGGTGCTTGCTTATTAAAAGTTGTATTGGTTTCTCACGGTAAAATAAAACGACAACATTGACATTATAGTGATAATGGTTATTTTATGGAATGACTTATCGCATCAGTTATCTTATAATAGTTATAGAGGATAGATTAAAATTGAGTTGGGTTTGGTGCGAACCCCAAGTGCACATAAAAAACCTGGGGGATTCGCACCAAAAATTTAATTGTTTTTTTCTATAAAATGGAATAAAATAAAGAAAAACACATATGTTTTTGTTTTCCCCTCTAAAAAATAGTTAATTTAAAGCATTTTTTGGAAATTTACAGGAGAAAATCGCA # Right flank : CCATATGCCAGAAGTTTTGTAGTGTACAATGGTTTCATTTCATAGACAAATTCGCTTAGAATCTGGAACCTAACCTCCTCATATCCCATAAACTTTGATATATAGCAAGAAGAAAGAAAACGAGAGGGCTACTATCAAAACTTGATAATCCAATAATTGATAAGATAATGAATGGTACCGTACTCTATTTTTACCATCCCCAAAACCCCTAGCTTCTATTGCCATAGATAACTGCTCTGCACGAATAACTAATGACGTTAACAACGGTATTAAAATACGATTATAAGTAAGCAACTTCTTTCTTAATGATAATGTTTCCATATGATTTCCCTTTGCTTTTAAAGCTGTTAAAATCTGTTGTAATTCCTGTAAAATAGTTGGTATAAAGCGGATTGCAATGATAATCATTAAAGCGAATTTTTCAACTGGAAAGTTTAATTTTGCTAATGGTTTCATGAGCGCCTCCAATCCATGTGCAAGCGTCAATGGTTTAGTAGTAA # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 528350-528584 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018622.1 Virgibacillus dokdonensis strain 21D chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 528350 32 100.0 34 ................................ AGCAGGCTATAAATCTATCATGCATATACACGAT 528416 32 100.0 35 ................................ AGCATCACTTGTAGGACTATTCGATGTGGAAGAAT 528483 32 100.0 36 ................................ TCTTTGGGATCAAACAACTTTGTCAATTTTACAAAG 528551 31 87.5 0 ..........A................-.C.G | A,AA [528572,528576] ========== ====== ====== ====== ================================ ==================================== ================== 4 32 96.9 35 GTCGCACCTTGTATAGGTGCGTGGATTGAAAT # Left flank : AGGAAATAGCATTAAAAACAAGAATAAAGATGAAGTTTTAAATATTGATCCAGAATTAGAACTCTGGTATAAAGAATTACCAAGCAATGGAGAGGAGGATATGCGTCGTCTTAAAAAAATTTGGGATGTTTTTAAAGAGGAATAAAATTGGTGTTGTAAAGCTTTCTTCATTTTAGAATGTATAAGAAATTTTTCTATTGGAGTTTGGTCTCAAAAAGGCGTTCAGAAACTTCCTTTATATAATACGTCAACAGATAACTAAAACTTTCATGACCGCCTTTCGGGTATTCATTAATTGTTCTAAATACAAAAATTTTTACATAATATACTTGGTGCGAACCCCAAGTGCACATAAAAACCCAGGGGGATTCGCACCAAAATCCGCTTGCTTTTTTGATGATTTTTGTAATAATATTGAAGATAATTAGTAATATTTAAGATTTTCAACCTAAAATGGACTGTTTTTGATTATTTTTGTTATTTTTTAGGATAAAATCGCA # Right flank : GCTGGTATAATAGCCATTTTTAGCTTAAAATAATTCAGAATTATCCACCAAATCCTTTATTGAAGATGTTTGTAACTTCCCCCTATAAATTTGTAGTTGCCACTAGTAAACCAAAGTTTTTAGTGATCAAGTATTAAAAACATACCTATACATAATTTGAAAACTTGCAGGTGTTTCTTAGCCATGTATAGAAGTCTACTATAATAAAAGAGTTAAGGGGAAAGGTGAGTTTTATTATTGCCACAAGAACTATAACTGGGTTATTTACATTTGTTTTATTAATGTGCATTTCAATGGCGAATATCAAGATTTGAAGCACCAAATCGGAAAGGAACATTTTCTTTTCAGTTCAATGTTAGAGGATATCCTGACGGTGATAACGGAAAAGCCGAATTGTATCTAAGCAAGACAACGTATTCTGTAAATTCAGTAAGTACGAGATGGTATGATTAATTATACTTGTAGCATAGACATAACATATTAAGGGGTGATTAATTTGA # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTGTATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //