Array 1 2195750-2195002 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022378.1 Capnocytophaga cynodegmi strain G7591 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================================================================================================================================== ================== 2195749 36 97.2 30 ..................T................. CAAAAGTACAATTTTTATGAGAATTTCAGA 2195683 36 100.0 147 .................................... TATTAGCAATTTATGAATATTCATTCCCTTGTTGTGATTACCCTCCAAATACTTCGTATTCATGAGTTCTTTTGAAAAACAATAAAAACTCACGAATAAAATGAGAGCAGTTCCAACAGAACAGATGAACCCATAGAAACACGCTAT 2195500 36 100.0 30 .................................... GGTTGCTTTGAGGACTTTTGTGGCGAGTTC 2195434 36 100.0 30 .................................... GCTTTTCAAGAAATTATCGTAAATGCTTCT 2195368 36 100.0 30 .................................... TTTAACAACGAATTAGTTAATAGAATATTC 2195302 36 100.0 30 .................................... TTTAACAACGAATTAGTTAATAGAATATTC 2195236 36 100.0 30 .................................... CAACTTTTATCGAAACACAATGGTTTGGGT 2195170 36 97.2 31 .........G.......................... AACCTGTATATGTTTATTATCAGCTTATTGT 2195103 36 100.0 30 .................................... GATTTACATTTACACGATTTTAGGGGCTTT 2195037 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================================================================================================================================== ================== 10 36 99.4 43 GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC # Left flank : ATAATTTGCAGATGTCAGAAATTGTTGTACATTTGCAACCGCATAAGTGAAATAACTGATGCATTATTGGAGAGATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGACTGTAACAGGTCCGGGGGTTCGAATCCCTCTCTCTCCGCAGTAAAGGGTATAAATCAAGTAGTTACGAGATTTACACCCTTTTTTACACCCAAAAATATCGAATGATTTCTTATTTCTTCCCCAAATTCTTCATATTTTTCCCACATTTATGGCTTTAATTTTTCAGATTGGCTCAGAACTAAACTTTTGAGTTAAAAACTTCAAGTTACATCTTACTCAAAACACTAAAAATCAAATAATTACAAAAAAAATTCTTGCTAATTTCCACACGTGTTGTCCCAATAATACAACCCAAAAACATAATTTGCAACACTTTTCACACAAAAACAGAAAAATAAAGACCTCCCGATAAAGTACATCGGGAGGTTTTGCGTTAAATACAAT # Right flank : CTCAATGCTAAAAAATGAGTGTATAAAACTGTCAATCAGGAGTGTAATATCATATATTTTACTTCATCAGTGCTTCTTTTTCCCTTTTAAATACTTCTGCAAAGTACTCGGCATAGGTTTTTCCTTTTGCTATCTTGCCACATTTTTCTTGGCAATAGTCCCAAAATTCTTTTTTAGGCAATTGGTTGTGTGCAAATTTATTACGAATATAGGTTAAAACAAAGGCTTTTTGTTCTAAATCGGTTGCTTCTTGTTTTAGTTGGTTAATGTCCACATCTTCAGGTTTAGTATCTAAGTTGAATACCTTATAACCATCCACATTTTCATTTTTAAATTGCTTTAAAAGTCCGTTGAGAATGTAGTATTTGAAATTTTGATTATCCCCTTTTTTTAATATTTCCTTATCTTTTACCTTTTCTAAAATATATTCCTCTATAAGGTGGACTTCCTTCAGCAGTTCTTCTCTTCTTACTTTTTCATACTGTTCTATTTCTCTTTCC # Questionable array : NO Score: 4.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-1.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 2482495-2484390 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022378.1 Capnocytophaga cynodegmi strain G7591 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 2482495 47 100.0 30 ............................................... GAATTGAAAAATCATAATTCATCATACTCA 2482572 47 100.0 30 ............................................... CCATAACTAAAAGAAGCAAAACACGTAATT 2482649 47 100.0 30 ............................................... AATGCTTCTAACGAGAGTAATCCCTTACTG 2482726 47 100.0 30 ............................................... GTCTAAAGAACCGAAACCGAATTTCTCTTT 2482803 47 100.0 30 ............................................... GTCTAAAGAACCGAAACCGAATTTCTCTTT 2482880 47 100.0 30 ............................................... GCATAATCTACCCTATCCCTTTCAATAGCG 2482957 47 100.0 30 ............................................... GATATTCAGCCAATGCTCCACAATTCGCAA 2483034 47 100.0 31 ............................................... CGGTGAAGTACAAGTAAACACGGGTATACTT 2483112 47 100.0 30 ............................................... ACGTGCAGTTTAGATATACCGATGCAGTTT 2483189 47 100.0 30 ............................................... AATGAAAGATTATACCCTTCAAGATATGGA 2483266 47 100.0 30 ............................................... CCTACAAAGTTAGAGATGTAGCAACAACAA 2483343 47 100.0 30 ............................................... GAGGGTGCTGAGGGTAACACTGGAGCGTAC 2483420 47 100.0 30 ............................................... AGGGGAATGTTGAAAATGTCAATATAATAA 2483497 47 100.0 30 ............................................... CCTACAAAGTTAGAGATGTAGCAACAACAA 2483574 47 100.0 30 ............................................... GAGGGTGCTGAGGGTAACACTGGAGCGTAC 2483651 47 100.0 30 ............................................... CCTACAAAGTTAGAGATGTAGCAACAACAA 2483728 47 100.0 30 ............................................... GAGGGTGCTGAGGGTAACACTGGAGCGTAC 2483805 47 100.0 30 ............................................... CAGTTGTTAGGACTATGAAGCCTCGACCTT 2483882 47 100.0 30 ............................................... ATACTTTAATTATGTGTTTGAGAAAAAATT 2483959 47 100.0 30 ............................................... CTTCAAACTACCGCAGGAAATAGAATTACA 2484036 47 100.0 30 ............................................... CAGTTGTTAGGACTATGAAGCCTCGACCTT 2484113 47 100.0 30 ............................................... CTAATTTCTTACCAGTTGGCATTGCTCCGT 2484190 47 100.0 30 ............................................... ATACTTTAATTATGTGTTTGAGAAAAAATT 2484267 47 100.0 30 ............................................... ATAATATTGCCCAATACCAAAATGCATTAT 2484344 47 97.9 0 ..............................C................ | ========== ====== ====== ====== =============================================== =============================== ================== 25 47 99.9 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : ACAAATGCTATACGGGTGAAAAAAGACAAATTTCTTATCCTAAAATGTTATGAATTCCGAACGATTTAACGCTTATAGAATTATGTGGGTAATGGTTTTATACGATTTGCCAACCGAGACCAAGGCAATGCAAAAAGCAGCGAATCTTTTCCGAAAACGCTTGGAAGACGACGGATTTTCTTTATTTCAGTTTTCTATCTATTTGAGGCACTGTCCGAGTAGAGAAAATGCTGAAGTGCATAAAAAACGAGTAAAAATGATGCTTCCCAAATACGGGAAAGTAGCCGTAATGACGATTACAGATAAACAGTTTGGTGATATGGAAATATTTCATTCTAAAGTACGCGAAGATCCGCCACCTACTTACCAGCAGCTCGAGTTATTTTAGAAATAGAATGAAAAAAATGGATTTACTCAGCCCGATTTATTCTTTTTTTGCTCAATTTTTTATTTCTAAAAACAAAAATAATCCTCTGTCTGTTAGAGGATTATTTTTTGAG # Right flank : CCTGAACGTATTTTGTATCTGCTGACCATTTATAATAAGTACTCCTTTTGTGGTAATGGTATTTTGTGAAAGGACAGAAAAAACGAGTTAATGAATATCCTTTTTTTGTCAAGAAGTTTTTGACGTTCTTTATTGAATTTTCTGTGGTTACGAACTTCAAATTTTATAATTATGTAAGTAATCCACAACACAACAGCCCCTACGATAATGTACCAATATTGAAATAGATACCATACAATACCTGTGAGCAGGGCAACAAAAACAACAATTACGCCCCAAACAAAACTTCCTAAACTATTAGAATTTTTCATAACTCAACTTTTTACATTATAAACTTACTATCTTTTTTATATAGAACCCAACGATAACCTTAGGAAATCAGTTTTTCAGTTGTAACCAGCCACAAAGTTACCAAAATTTGAAAGCTTATCACAACTATTTTTGTGAAATTATAAATACTTCATATCTTCGCATTGCTTTCGATGAAAATAATAATAGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //