Array 1 55507-56179 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CVPH01000004.1 Listeria ivanovii subsp. ivanovii PAM 55 strain G_770, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=============================	=====================================	==================
     55507	    29	 100.0	    36	.............................	TCAATTCCCTTGTTCGCTATAAACGGATGGAATAAA 	
     55572	    29	 100.0	    37	.............................	TGTCTCGTCGAAGTATCTGCTTTAGCACCGCGATTTT	
     55638	    29	 100.0	    36	.............................	ATAGATAAAACTCTGTAATTCTTCTCTGTGTTCTTC 	
     55703	    29	 100.0	    34	.............................	TCACCACATAATTTTCTTTTTGCTCATAGTCTGT   	
     55766	    29	 100.0	    35	.............................	ATTTTACAGAGTTCAAGAAATATTTTCTCGCATGG  	
     55830	    29	 100.0	    35	.............................	TTAGAGGAAAAGCAAATTAATAGCATGCAATAAGC  	
     55894	    29	 100.0	    36	.............................	AATATCATAGATGCGACTACAACGCCGTCTGACACG 	
     55959	    29	 100.0	    36	.............................	TTTTAAAGTAAGCTTCTGCTTCTTTAAATGAGGTAT 	
     56024	    29	 100.0	    35	.............................	AGAATTCTTCTGTCGGATACATTTGAAGCGTTCCG  	
     56088	    29	 100.0	    34	.............................	TTCTTCTGGCGTCTTCCAGTTTGTCATCTGCTTT   	
     56151	    29	 100.0	     0	.............................	|                                    	
==========	======	======	======	=============================	=====================================	==================
        11	    29	 100.0	    36	GTTTTAATTACTTATTATGAAATGTAAAT	                                     	       

# Left flank :   GTTTAAAATTTGGTGGTAGATATATGTATGTTATCCTAATTTACGATATTTCGGTGGAAAATGGAGGTGCCAAAGTTTGGCGCAATGTATTTAAAATTTGCAAAAGATATTTAACACATGTTCAAAAATCAGTATTTGAAGGGGAAATAACTCCAGCGCTTTTAGTGAAATTACGAATGGAATTAGATAATTATATTCGTGCAGATGTAGATTCTGTGATTTTGTTTTCTAGTAGACAACAAAAATGGTTAGAAAAAGAATTTTGGGGACTAGCAGATGAAAAAACATCGAATTTCTTTTAGGTGGCTTGTTTCTGTCGACCTCTAGTAGTGTGAAAAACACTAGGGATCGACAGAAATGCGGAATTCGCTGGAGGAGAAAGGGTTTCAGAGATTTCGATTCTTAAAAAAGAAAAAGTGAAATAAGTTTTCCACATTTTAGCGTAGGTCGACAAAAATAGGCCCTTGAGGTAAGATGGGAGTAGGGTAAAAAGTTGACGG
# Right flank :  TATTTTTTGTGTCGAGCCAATTAAATTGTGTATTTGAATTTTAGCTTCTTAACATTAATAGATAAAATATTCATTGAATTTCTAAATCTCTTTGTCAAAGTAAATGTGGGAAATAAGATGGTATAGGCTAGAAGAAAACAAAGCAAAAGTTTGCGAACTAGAAATCCAGTAAGTACCTTGCAAAAGAAGTAAAGCGCATGCGGCGAAAAGACATCACCGAACTAAATGGTTATATTTACAGGTTAAGAGGTAGCAATACAATAGTAAAAATTGGCCCGAAAAATCAAAGGAGCAATCACAGACTCAGAGGACTAACGAATATAGCGATACCTTTAGAGCAGATAAAAAGCTTTAAGGGTATTTTTATCTCCAAAAATCTCTCTTTTACTGGCCCATCCCCATATTCCTAATTTTTTCGTCCAGCGAAAACCGTTTTCGAAATACTTGTAACCGCTTGCAGTAACATAACTCTAAACTTATAATGAACGTAGTAAATGAGT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAATTACTTATTATGAAATGTAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:86.21%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAACTACTTATTATGAAATGTAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.27   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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