Array 1 218088-221224 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBMS01000002.1 Legionella pneumophila strain SH202 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 218088 37 100.0 34 ..................................... TGAACACCCTCGGAGCTTATTTCATTCCTCTGCC 218159 37 100.0 35 ..................................... TGATCCATATATTCCATTAGCTACCGCTTGCATCA 218231 37 100.0 35 ..................................... GCACAAAATTTGATAGGCTGGTTTTGTAATAGAGC 218303 37 100.0 34 ..................................... ATCCTGCTCCAGCGGTTACTGATGTGGTGTTAAC 218374 37 100.0 33 ..................................... AATTAATGTATATCTATAGCAGGTCGAATTTAG 218444 37 100.0 36 ..................................... TTCGACAGTATCTTAGTGTTCACTAACGCTGTAAAC 218517 37 100.0 36 ..................................... GTTCAAGCTCGGCAGTCGCGCTCAAACTGTTAAGAA 218590 37 100.0 37 ..................................... GCCAAGGTAATCGGCTGGGGATTCTATAAACAAGATA 218664 37 100.0 35 ..................................... TAGATAAACCCTCTTGTTTCCAGCCACATGGTTTA 218736 37 100.0 33 ..................................... ATCAGGTAAACTATTATCTGCAAACTTAACCAT 218806 37 100.0 35 ..................................... TCTCGTGAACAAATGAATAAATCTGGCTCATTAGC 218878 37 100.0 34 ..................................... AGCCATGTTGCAAAATCTACAGGCATTTTATCAC 218949 37 100.0 36 ..................................... TTTAGATAAGCTTCTGCTATATGTGCGGGGTATTTA 219022 37 100.0 36 ..................................... GCAGGTAATTTTATATTATCACGTGACATATTTTAC 219095 37 100.0 35 ..................................... TGGTCGCTGGTCTATTTACTATGATTGCATTATCA 219167 37 100.0 37 ..................................... TAAACAGGCTCCCCTGTAACAGAGCCTCCAGCATATC 219241 37 100.0 37 ..................................... TTATTAATGTAAGTCGTAAAGAAAAGTGGATTGATTA 219315 37 100.0 35 ..................................... TTTGTTGGGGTGGTTGCGGCTGCTATAGGTAAAGC 219387 37 100.0 35 ..................................... ATGCTCAATCTCATCTTTATGCCCTGCTAACTGTT 219459 37 100.0 35 ..................................... CATAGGTTATCGCTATTTTATGAGGTTAGAAAAAG 219531 37 100.0 35 ..................................... CCTTATATTATATTAAATAGTGTAAAGATTTAGTA 219603 37 100.0 34 ..................................... TATAGTGCAGGAGTTACTCGTAGTTGCCGTTACT 219674 37 100.0 35 ..................................... GTAACAGTAAATAACGCAACATTTGGCGACGAGCA 219746 37 100.0 36 ..................................... CGTCAAAGCTCCTTGTCCTTGCGACTGTGTCGTACT 219819 37 100.0 35 ..................................... CCCTAAGGGGAAGATGTGAGCGGGAAGACACCTGA 219891 37 100.0 35 ..................................... TTCCATAAATCAAGGTTAAGAGAATTGGTAACATT 219963 37 100.0 35 ..................................... TCCATAATTAGAACGTTTAATTACTTTTCCTCTCC 220035 37 100.0 34 ..................................... GCATGTCTGCACTTATCCAACGTAGAATATCTAT 220106 37 100.0 34 ..................................... TTTGAAATTATGTTTGTTGCTGCGGAGGCGGGAT 220177 37 100.0 33 ..................................... TGGGTAACTCATTATGAGGAAATGGCCAAAAAA 220247 37 100.0 35 ..................................... TTCGAGAGGATTTTCATTCTTTAAATCGTTTTTAA 220319 37 100.0 36 ..................................... TTTGGTAGGAAGTTATTTTTCCTACTATCAGCACAC 220392 37 100.0 37 ..................................... GTTACGCCTTGTGGCCCAAAATTTACGACATAAATCG 220466 37 100.0 34 ..................................... TCAATCCCTTCCACGCTGTAATCATTTTGAGGGC 220537 37 100.0 35 ..................................... ACATAGGCAGCAGCTAAAGGAACAGAAATAGGGGT 220609 37 100.0 37 ..................................... AGTCATGTTTTAATTGCATTTGATCGCGGGTATAGTC 220683 37 100.0 34 ..................................... AAATCTTTAACTCTCATGGGGCCGGCCTGAATTC 220754 37 100.0 37 ..................................... CTTTTGGTATCATCATGTATCTGGCTTGGCCGAAAAA 220828 37 100.0 35 ..................................... GATATAACAAGTTCTCCGTGGAGTCCGTCATCATA 220900 37 100.0 34 ..................................... CTATAACGTAATGTTTTTGTTGATATTGCATCTA 220971 37 100.0 36 ..................................... CCTTGGGCAAGAGATACACTCGATTATATACCCGAC 221044 37 100.0 35 ..................................... AAATTTCGACCAAATGAAAAAGTAGTGCTTACTCC 221116 37 100.0 35 ..................................... GTTATAGATGTTAACAAACAAATGCTTGAGGCTCA 221188 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 44 37 100.0 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : CCCTAAATGGGCAAACAATGCGCCCAAAATTAATCCATATATACCCAAAATGTAGTTGGTAAAGTTGCCAAACTGGTTTTTAATGTTCTTTTCCATTGAGTCAATGCGACTATCAACGCTTAATAGCCTCTTGTCTAAATTATCAAGAGTTTTACCTATGTGCTGAGTGTTGGATTTTAAAATCTCAATCTCTAATTGCTCTTGTGTGTATAGTTTTGATGTCATGATTCGCCCCTTAATTCCAATAATCCCTCATCTAAAAATCCAACCACTGAAACTTTTCGTAGACTTCTTTTTGAAAGACGTATTTACCCAATAATCCCTCATCTAAAAATTTAACTAATGAAATACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAATATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //