Array 1 72105-75175 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTVH01000013.1 Clostridium sp. AF36-4 AF36-4.Scaf13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 72105 36 100.0 30 .................................... TTGGACTTAGATAAAGCCTTTGTAATGTAT 72171 36 100.0 30 .................................... TAAATGAGGAATACTATAATAAGGCACTTC 72237 36 100.0 30 .................................... ATTACCTTTACGGCATACGCACACATTACT 72303 36 100.0 30 .................................... AACTTAGACTACAAAAAGGGTTCACGCTCG 72369 36 100.0 30 .................................... AAAAAGATGGTGACATAATTATCCGGGAGG 72435 36 100.0 30 .................................... TACGCTTTTTGCCACGTTTATTGCCTTTGG 72501 36 100.0 30 .................................... TGAGACAAGGGAGAGTATCGCATGGACACT 72567 36 100.0 30 .................................... TTCACCTAGTGAATTGTTGCAAAAATATCG 72633 36 100.0 30 .................................... TTTAATGAAGAGAGGCTAGTGGTAAATACT 72699 36 100.0 30 .................................... TGCCCGTTCGGGCACGTGCATATGAAGAAC 72765 36 100.0 30 .................................... GCGGTGTAATATTATGACAACAACGGATAT 72831 36 100.0 30 .................................... CAGACATTCCACAAGAAGATTTATTGAAGA 72897 36 100.0 30 .................................... TTTGGAAGTGCAGAACAGCGGTTATAACGG 72963 36 100.0 30 .................................... GCAGACCTTAAAGAAGATATTGAATCCTTG 73029 36 100.0 30 .................................... CAAATGGAGAAACAATTAAATCTATCCCGA 73095 36 100.0 30 .................................... AATCAGAAAGGAGATACACAAATGGAAGAA 73161 36 100.0 30 .................................... ACAAACAAGTTAAAAATGCAATTCTTGCCC 73227 36 100.0 30 .................................... TGATATTGATTCTACCATAGGCAACCCCCA 73293 36 100.0 30 .................................... TTTCTTGTTTTGATTAGTGCCGCTCGTGTT 73359 36 100.0 30 .................................... AAAAGTCGTTGAATTATTAAGCAAAGGAGT 73425 36 100.0 30 .................................... ACAATGTTGGAAATTTTGAATACCTGGTGA 73491 36 100.0 30 .................................... AAGGTGAAGATTTATGGTTGCTAAAATTTT 73557 36 100.0 29 .................................... CAACTGTACTGGCAGCCATTCGTCCGCCA 73622 36 100.0 30 .................................... TTGTATGTATTAATTTTCCATGTGATTATG 73688 36 100.0 31 .................................... CCGGTGACACCGCCTATCATGCAGGACATGA 73755 36 100.0 30 .................................... AAAAAGATTCCAAATTAACCAGCCGGGCGG 73821 36 100.0 30 .................................... AAAGAATTTGAAAGAAAGCTAAATAATGCA 73887 36 100.0 30 .................................... AAACAATAATCTCTATTGGAACAATAGTAA 73953 36 100.0 30 .................................... CACATCCTGACGGAGTGCATAAAGGCATTA 74019 36 100.0 30 .................................... TGATAAATCGCATTTCATTAGCAATTCATA 74085 36 100.0 30 .................................... GGCGATTTCGTCAGTTTTACACAGTTCTCC 74151 36 100.0 30 .................................... GCCTACTATCGTCAACAAGAGATGAACCTT 74217 36 100.0 30 .................................... TCAATATCTACAAACAACACTTTTTTATCT 74283 36 100.0 30 .................................... GCGTAAAGGTTAGAAAAGACCTCTATGTGC 74349 36 100.0 30 .................................... AATTCAATGTTCGTCCATTAGATAAGGATG 74415 36 100.0 30 .................................... ATCTGCATCAAGAGTTGCGGCAATTGAAGT 74481 36 100.0 30 .................................... TCCACCGTGGCTGCTACAACCGCAGACCCG 74547 36 100.0 30 .................................... ACAAACGTAAAAAGTGCAGAAATGGCAGAA 74613 36 100.0 30 .................................... CACAAGTGATGTAAAGCACGGTCAGACAAC 74679 36 100.0 30 .................................... ACATCAGAAGAAAGGCTTGGTGTTTTAAGC 74745 36 100.0 30 .................................... TACGAGATAATCCACCAACATCAATTTTTG 74811 36 100.0 30 .................................... TGTTAATCTGATGTTGAGTTTTTCTGTTCT 74877 36 97.2 30 ..........T......................... CGCCTTTTTTACATGTTCAATCTCTAAATG 74943 36 100.0 30 .................................... GGTTAGCAACTTTATTAGGGTTAAATTCCA 75009 36 100.0 30 .................................... ACTCACGTGCCCAACCACGTATCTCAACCT 75075 36 100.0 30 .................................... ATTATCGTGACATTATTAATATGTCTGTTT 75141 35 80.6 0 ....................-.T..TT.A..A...G | ========== ====== ====== ====== ==================================== =============================== ================== 47 36 99.5 30 GTTTGAGAACCTTGTAAATTATGATGGGTAAGAAAC # Left flank : TAAATAAATTATATACTAAGTTAGGTGAAATTGCACCAGATTATTTTGAGGATAAAGCGAAACTTACAGAGGATGCTATTGTACTTTTGGATAAACTTGTGCTTGCTAGTCCATTTGCAAATTTGGTTTATGATTTGGATTATAATTGGATGGAGCTGTTTAAAGGATTTAATGTTCGTTTTGAAGAAATGGCAGTAACACTTGTTGAAAAGTTAGTTGAGTACATGCATATTTTAACAAATTTGCTAGGGATAAAGGTGTTGTGTCTGGTTAATATTAAGGCTTATTTAAATAAACAAGAATTAATTGAATTGTATAAAGTGGCTTTCTATAATAAGATTAATTTGGTTCTTATTGAAATGACAGAGGGGGAGGTGATTGGTGAAGAAAAGGTGTATATTATTGACAACGACCGCTGTTTAATTGTAAAATAAGGTGTAATCATAATTTCGCTGTTGTGAGACAGGTAGGTTCGGGGATGACCAAAATGCAAATTTGAG # Right flank : GATGTGCGTATAACCGTGTTATATTGCCACCCTCCCCCAACCCATGTTACACTAAGATCAAACATTCCAACCGAAAGAAGGTGGCTGCTATGGGATTTTTCAAGAAAAGAGAAAAGGCTGCGCCAAGTGGAGATTTTGACAGAGAAAATGAAAAGCCCATTATTAAAGCGAGCATTTGCAATGGGGAGCAGATTGCTGGATTTAAAAATATTCATACAGGCAAAATGAGAGAAATTATGCTGATAAAAACGTCGGCTGATTTGGAATATTTCAAGACTATGTATGGAATTGAAACGGAAATCGAAAAAGAGTATTAATCGAGGTGTTGTTTTTATGCAAAAGAACAAAAAGTGGGCATATCCGGCATTTATCAGGGAAGATGAAGGAATGCAGTTAGTGTATGTGCCGGATTTTGCGATTTTTACGGAAGGTCATGATTTGGTAGATGCAATTGAAATGGCACGAGATGCTATTGGCATGACAGGAAAAGCATACGAGGA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAACCTTGTAAATTATGATGGGTAAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //