Array 1 442645-441093 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNAH01000001.1 Ruminococcus bromii strain BIOML-A2 scaffold1_size453064, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 442644 36 100.0 30 .................................... AAAGGCAAAGAGCAGTACGACCCGTCCGAG 442578 36 100.0 30 .................................... AATTCGGGTTTCGTTCCTCGAACCCCTTTA 442512 36 100.0 29 .................................... TCACCGAAGATTTCTTGATAGGCTTGCTT 442447 36 100.0 30 .................................... TCGGCAATGGGTCTTCCAACTTCTTCTGCC 442381 36 100.0 30 .................................... GGCTTTTCGCTCGGCTTCGACCTCAAGCCC 442315 36 100.0 30 .................................... TTGGAAACAAGCATAATATTTCAAGACAGG 442249 36 100.0 30 .................................... TGATTTGGTCTGCGCAGTTTAATGCGATTG 442183 36 100.0 30 .................................... TTTACTTGACTTAAAAAGTAAACTTAGTCA 442117 36 100.0 30 .................................... AGCGCAAGAGCAACGGTTACAATCGGTGTC 442051 36 100.0 30 .................................... GTATATGGACAAAAAAGATTTTGCTGACAA 441985 36 100.0 30 .................................... GTACTGCAAGTCTCTTGACCTTTTCTACTA 441919 36 100.0 30 .................................... TAAAAAATTTCTCAGCTATGCTATCCAGTT 441853 36 100.0 30 .................................... ATAAGTTGATAGTCTGTCATAGTCAGCGTG 441787 36 100.0 30 .................................... TATGTTTTTGTGCCGTCTTGCTCCGCCTTG 441721 36 100.0 30 .................................... GAAAGAAAAATCATAATTGTTTAACTTGTG 441655 36 100.0 30 .................................... ATCGTGGGTATAACATTATGTACACACTCA 441589 36 100.0 30 .................................... TTCTTCAACATCGTACTGATGAGGGTTTGC 441523 36 100.0 30 .................................... AGCCGTGTATAATAAAAAACTTGACAGCAC 441457 36 100.0 29 .................................... CTCTTTAAGAACAAGCACATCATTTTTTA 441392 36 100.0 30 .................................... GGTATTGACAAACATTACAAAATGTGGTAC 441326 36 100.0 30 .................................... ACAAGAAACTTGATGAAATGGCAAGCGACG 441260 36 100.0 30 .................................... TCTTTCGTGCGAGTTCCGCTTGTGACATAC 441194 36 100.0 30 .................................... AACTGATAAAGTTTTCACTATGTCAGATTC 441128 34 88.9 0 .......................T..--.......T | C,A [441096,441107] ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.5 30 GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Left flank : TTTTTTTGAAAATTTGTGTAATACAAAATATTTTCCGCAAATTTCAGAAATTAAAGCTTTATGTGTGAGCTTGTGCTGCGAGCTTTCTAAGGAAAATGATTATGATTTTCAGTTCTGCGAAAGTATCGAAACAATGGCATTAGTAAAATTGTTTTCATTTGCGCCTGCAGATGCCTCGGATGATAATGTCGGTCATCTTTTAAGATATTTCAAACTTATGAAAGAGTATCTTGGAATAAAGTGTTTTATTGTTCAAAATCTGCATATTTATCTTGATGACAGTGAATGTGAAAATCTTTTGGAATCCGCTGTTATGCACGGTATATATTTGCTTAACATTGAAAACTCAGTGCCGAAAGAAGTTTCTGAATACGAAAAACTTGTTGTGATTGATAATGATTTGTGCGAATTTTATTGACAATCATTATACAAATGTTATAAAATAACCTCATAGATTTGCCGTGCACAGTATAGTGGGTGCATTTTATTCCCAATTTGAG # Right flank : TTTACTCGTGGACTGTGAAAAAACAGCATTGCAAAAAACAATAAGGCACATAACCGTTATCACTTTCGGTTATGTGCCTTTTGTAGTTTAATAAGTTTGTTAAGAATACCACGATTGATTACAGTCCAAAACAAGGAAGATTTCAGTGCGTTAATTCCAAAGTAAGTTCCACCATTAAAGTTACTTTGGGGATTAACTATGTACTTTTTTGTTTAAGTTTGCGGTAAATATGAATTGTATAATCCGTTTTATTGTGTTATTATGTAGTAAAATGGTGTGCAACATTGGTGTTTTGAAAAAATTATGTTGCTGAAATTAAACTTGAAATAACTGACGGGTGGCATATGGTTCGCAAAGTTGACAAAACAAAGCTTCTGACTGTTGTCGGGATAATTATATTCCTGTTCGGAGGTGCGGTGAGAATTTTTTCTCATCTTACTTCCTCGGCGGATAATTATATTGAAAATTTTGATGTTATTATCTTTTCGGGGCTTATTATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //