Array 1 1629867-1627571 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP012273.1 Thiolapillus brandeum strain Hiromi 1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1629866 29 100.0 32 ............................. CCCTGACCAAAGGGTTCCATGGGAAGCGACTC 1629805 29 100.0 33 ............................. GCAACGCCATCTACAATGCGCTCAAACGCCACA 1629743 29 100.0 32 ............................. GTGCAGATCAGCAACATCCAGGAGACCGACGT 1629682 29 100.0 32 ............................. GCGAGGAGATCACAATGATTTACAGCAACACA 1629621 29 100.0 32 ............................. GTGCCGTACAGCGCCTGGCAATCGGCAGGTCA 1629560 29 100.0 32 ............................. GAACTATGTCAGGCACTGTTGAAAAAGCACGG 1629499 29 100.0 32 ............................. TCCTATCTGCGAGATCAGGTCGCGCAGGTAGG 1629438 29 100.0 32 ............................. CACAATTAAATGTAACAATGGACTATGGTCGG 1629377 29 100.0 32 ............................. TGGTTATTGCTGATACCGCAACTGGCGAAAAA 1629316 29 100.0 33 ............................. CCCTGGGCAAATGGTGCCACCGGCAGACCGGCA 1629254 29 100.0 33 ............................. GCCACCCGATGCCTTTTGTTGGATCAGTCGGGC 1629192 29 100.0 32 ............................. GCGCAGCAGGGGTGACCAGCCCACTGGAGGCC 1629131 29 100.0 32 ............................. CGTTACCGAATCAGGCAATTATTCGCTGAAAT 1629070 29 100.0 32 ............................. CCGCCCTGGTGAATGCCCGGGTAGGGGCCAGC 1629009 29 100.0 33 ............................. CCGATCAGTGACGATCACCGACGGCACAACGTC 1628947 29 100.0 32 ............................. TGTTTTCGAGTGCCAAAAAATCTATTGGGCAA 1628886 29 100.0 32 ............................. CAGTTTTAGCTACGCTTGGTATGTTCAAGAGT 1628825 29 100.0 32 ............................. GCGGGCAAAGACGCTCCGGAGTATGTCAAGGC 1628764 29 100.0 32 ............................. CACGACCAGAGCAATGAACGTGATTCTGCAAG 1628703 29 100.0 32 ............................. AGCATTGTTACGGGCAAATATCCACACATGAA 1628642 29 100.0 32 ............................. CGCAGGGGATGGCCCGAGCGCAATACCAGCCC 1628581 29 100.0 32 ............................. ACGCGCTCACCATCAACGGCGTGCCTATCGGC 1628520 29 100.0 32 ............................. ACCACCTGTTTGACCTGGCCGACGCCATCGCC 1628459 29 100.0 32 ............................. GTCCGTATCGCGCAGGATATCTGGGGGCGCTC 1628398 29 100.0 33 ............................. CATCGGTGGTTTCAGTGTAACTATGATCATACC 1628336 29 100.0 32 ............................. CGCGCCCTATCCATTGAACGCGACGGACGCTG 1628275 29 100.0 32 ............................. ATCTAAAGCCAGAAGAGCAGTTTGAGGTGTTG 1628214 29 100.0 32 ............................. GGCGTGTTCCGCTTCGCCAACGACGGCTCGAT 1628153 29 100.0 32 ............................. TTCAAGTTATGGGGCAATGCGGGCGCCATCGA 1628092 29 100.0 32 ............................. TATTGATCTGCCGGGGACCGATGACCTCAACA 1628031 29 100.0 32 ............................. TTCAGCATGTTGCCAAGCGCATGACGCCAGCC 1627970 29 100.0 33 ............................. CCAACAGCAATGACTATCGACGAGTTCAAGGAC 1627908 29 100.0 32 ............................. CGCCAGCCTTGCGCTCACCACAGACCAGCCCC 1627847 29 100.0 32 ............................. TGATGAAAATAGCCCGCCCAATCGTCAGATAC 1627786 29 100.0 32 ............................. AAGGGGGGCAGGACGCCCCCCTATTGACCCAA 1627725 29 100.0 32 ............................. GGGGTATCAGGACCCGTTGCCCGTAGATCCGG 1627664 29 100.0 32 ............................. CGCATCGGATCTGTGGCACCTCTGGCCAACCC 1627603 29 93.1 0 ................G.....C...... | GACA [1627585] ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.8 32 GTGTTCCCCACGCCCGTGGGGATGAACCG # Left flank : CGAAAGAATCCGTACCCCCGGCCATACCCGAACCCAAAGGCATTGGCGATGCCGGACACAGGGGTGGCTGAACATGGCCATGATCATGGTAGTCACCGAAAACGTTCCGCCCAGACTGAGGGGGCGATTGGCAGTGTGGCTGCTGGAAGTGCGCGCTGGCGTCTATGTTGGCTCGGTTTCCAAACGGGTGCGGGAGATGATCTGGCAGCATTGCGAAACCTTCATGGAAGACGGAAATATCGTCATGGCCTGGCAAACCAATACTGAATCCGGCTTCGATTTTCAAACACTGGGAGAGAACCGGCGCATGCCTATCGACTACGATGGTTTGCGCCTGGTGGAATTTTTCCCCGTAGAGGAGGAGAATTCCCCATGACATGGCTCTTTAATAACAAGGAACCCAATAAAAACAGATGCTTACGAATTGCCGAAAAAACCTAAAAATCGGTAAAATTTTTCAGTCTGCTTTTTCTTTTTAAGATCAATCGATTATGATTGGT # Right flank : CCGAAGATGATCTGGTCCTGCTTAGAGCGCATGAGCAGCTGGTGACTGTGTCCGGCGTGGCCGGGCTGGAAGGGAAGCGCAACGAGCTGACGCTGGTGAAGCGTGGCATGGAAAAAAATCGCTGAATTTGCTATGTTGATAACATCGAATCAGCACATGAGGCGCTTATGTTCATACTTGGCTGGATGCTGATGTACCTGCACTGGATTGTGCTGGCCATCGGGCTGTACATCATCTACCGCTTATTCAGTTGGCTGGCCAGCAAGGGCCTGTAGGGCAGGCAATAAAACGAACCAAACCCTGCTACGGCGGGTTTTTTTTGTTGGGCAGAGAAAACCATAAAACCGGCCTGATTATCACCGGAGACGTCCGTGGTGGCGTGCAGGCCGTCAGGCTGATCCGAGAAGAGCTTCGGTCGTTCAATGCCACGACCCGCAAGGATGCGAAGGATCAGCGGCGGTTCCGCGCTGAGCTGGAAATGAGTTGCAGTGAGAGGAGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCCCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //