Array 1 480202-481493 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023008.1 Pediococcus pentosaceus strain SS1-3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 480202 36 100.0 30 .................................... GGAACTGATGTTGAATCCATCGAGATTGTA 480268 36 100.0 30 .................................... TTGTAGAATTGAATTTTGAATAATGATCGA 480334 36 100.0 30 .................................... GAATCGTTTCGGCTGTTAAATCCGGAATGA 480400 36 100.0 30 .................................... ACCAGGATGAGTTTGAAATCAGTCAACGAA 480466 36 100.0 30 .................................... GGCCGTTTCATCAATTTCAAACGTTACGTA 480532 36 100.0 30 .................................... CATTATTTTTTAGAATGTAAAAATAAGGCT 480598 36 100.0 30 .................................... CGTCCTTTTGAGACACCTGCATAGTTACCT 480664 36 100.0 30 .................................... TCTGATTAACATCACTTGTAACGGTAATTG 480730 36 100.0 30 .................................... ATTAAGCTCAATCCAGAGATTGCATCAGTC 480796 36 100.0 30 .................................... ATTAAGCTCAATCCAGAGATTGCATCAGTC 480862 36 100.0 30 .................................... ATCGCAATCAAGATATTTTGATTCAAATCA 480928 36 100.0 30 .................................... CGACCGGAATTTCAGACAGTAAAAAGGTGC 480994 36 100.0 30 .................................... TGATGTACTAGCGATTGTGCTAATTACCGT 481060 36 100.0 30 .................................... TACTTGTAAAAAATCGTTTTGCGGGCGCTA 481126 36 100.0 30 .................................... AATTCGGATGGTAGCAACCGATTGTGGTTG 481192 36 100.0 30 .................................... AGGGAATGAGACAGACGAATACCAGTGATG 481258 36 100.0 30 .................................... ATGTTTGTATCATCTAGTTTCTATCGTGCA 481324 36 100.0 30 .................................... TACAAAAAGCCAAAGGTTAGCAAAGTAACA 481390 36 100.0 30 .................................... GATGTTTTAGATTTTGAAGAATACACAAAA 481456 36 91.7 0 ...........A.................A..T... | C,A [481484,481486] ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.6 30 GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Left flank : CAGAATTTAGTTTTAACAAAATATTTGCGCCAAATTGAAAAGTTATTTTTACGGTCTGTTACAGATGAACAGCAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCCGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACAATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGCGTTAACTAATGTAGCTCATTATTTAACGTCAGTCGAATTTGAAGAACTTAGCCAGTTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAGCTTCTATGGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAATG # Right flank : CAAACTGTACCCCCGCAACAACTTAGCCAGCTGTTGTAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAAAAGAATCATTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGATCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGTCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATATGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCCAGCGTGGAATCAGCTCCAAACATTGCACTGAGGTTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATCGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACCAAGGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATGATCGTAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //