Array 1 43057-43695 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACYIE020000029.1 Escherichia coli strain NT1A34 NODE_29_length_49853_cov_209.955521, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     43057	    29	 100.0	    32	.............................	TCGCTCCGGCGGGCTGACGCTCAACAAACCGT	
     43118	    29	 100.0	    32	.............................	CGTGACGCTGGTGGGCGTTTTGTTTTCCTGCT	
     43179	    29	 100.0	    32	.............................	CCCTGTATCGATGCGGAGCGGCAGCGCTGGGA	
     43240	    29	 100.0	    32	.............................	GGGTTCTATTTCCTCGGGATTTGCCGACACGC	
     43301	    29	 100.0	    32	.............................	GCAAAAACCGGGCAATCGCAAAAAGGCGTAAT	
     43362	    29	  96.6	    32	............................T	GTGTTTGCGGCATTAACGCTCACCAGCATTTC	
     43423	    29	 100.0	    32	.............................	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA	
     43484	    29	 100.0	    32	.............................	AGCAGATACACGGCTTTGTATTCCGTGCGCCC	
     43545	    29	 100.0	    32	.............................	AATAGCAATAGTCCATAGATTTGCGAAAACAG	
     43606	    29	 100.0	    32	.............................	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC	
     43667	    29	  93.1	     0	.A..........................A	|                               	
==========	======	======	======	=============================	================================	==================
        11	    29	  99.1	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//