Array 1 1795081-1794928 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV861362.1 Streptomyces sampsonii strain KJ40 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 1795080 24 100.0 41 ........................ TCTTGAACGGACGAGTCCGATCCGGACCTCGGCCCACAACC 1795015 24 100.0 40 ........................ TCTTGAACCGTCAGGTTCCCCCGGGCCCAAGCCCAAAGAT 1794951 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ========================================= ================== 3 24 100.0 41 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : CCAGGGCCGCAGGGCATCCAGCGCCGCCGGAGCGGGCGGCGCACCCCCGGGCCCCCGCACCAGCCACTCGTTCCACAACGCACCCCCGGGCGCCACCACCGCCTCGAACCGCAACGCGGGCCAGAGCGCCACCGGCCACCGCAACGCCTCACACTCCAGATCCCCCACGACCCGCCGCTCCACGGCCTCCGGCACCCCCAGCACCGACCGCAACAACCCGGCCCCCCGCCGCCCCCTGGGTGACCGCACCATCGCCTGCCACCGCCGGTTCGCCTCCCGCATGGCGCCGGCGTCCACCCCCAGCTCCCGCCGCGCCTCCTCCACCATCCCCGCCTGAAAATCAGCCATCCGCCGCAACAACACCAACTGAAACTCAAGCGACCCGAACGAACTGGTCCCACCGACAGCAGCGCACATCCCCCCATTGTCCGCAGCCCCCACCCCACCGCGAAAAACAGCGGGCACGACCGCCGAGAGGCAACTGGCCGACCGCCGGAAAA # Right flank : CCCCACCGCACCCCCGCCGGGGAGGGAAGACTCACTCCCCGGCCATCCTCCGCAACATCCCCCGGAGGACCTCCCGCTCCTCCCGGGAGAACCCGGCAAGCGGCTCCCGGGCAAAATCAAGGGAGTCCCGCAGCACCCGCGCGACCTCACGCCCCTCCGCGGTCAGAGCGGCCACCTTGATCCGCCGGTCCCCGGGATCGGCCTGCCGCTCGACCAGCCCCCGCAGGGCGAGCCGGTCCACGATCCCGGTGACGTTCGACGGCTCGCACTTGAGCCGCCGGGCGATCTGCCGCATGGGCATCGCCTCGAGGGACAGCAGACCCAGTACACGCGCCTGCGCGCCGGTGAGTGCCTGCTCGGCGGCGGCCCGGTCGTACTCCTCGTGGTACCGCGCCACGACAGCGCCGATCAGCTCGACGACTTCGAGGGTCAAGGGGTCCGTGCGGGTGGCCATGGGTCCCAGGATAGCCGGTTGCTTGACAACATGAAATATTCAGACG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.20,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [26.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 2091304-2091153 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV861362.1 Streptomyces sampsonii strain KJ40 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2091303 29 100.0 32 ............................. CAAGGCGAAACCTGCGCGGTCGCCGCCGGCGT 2091242 29 100.0 32 ............................. TTCGCCGTCGCCTGCGGGTCGAGCAGCCAGCG 2091181 29 96.6 0 .................T........... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : ACCCCGGCACCCACCCCCGCGTCGTCCCCGCCCACCACAGAACCCCTCCCCGTAGCCCGGTCTGCCGCTGCGGGTCACCTTAGGGGACGGGGGGTTGGGCGTCTTGGGGGCGAGGGGGTGGGGGTGGCGTGGGCGGCTGGTACGGGGGTGGGGCTTCGGGAGGTGTGGGCGGGGGTGTTCGGGTGCGTTCGGTCGGGGCGTCGAGTGGTTCGGGGGAGGAGGGGCGTGGCGGGGCTGGAGTTGACGCGGGGTGTTGTCCTGTTCCGATCCGCAGGAGCCACTGGGCGAGCCGGGTCGGAAGTTGGGGGCTTGGTTTCACTTGGGTGCGACGTTGCTGGGGGGTGCGCTTGAGAAGGCGGAGTCAGGCGGGGGGAACTGGGGGAGGATGGGTGGGCTGATGGATCGAGAGAGGGGCGTTATGTCTTTCGCACGAAAGGCCGGAATCGGCGAAGCTTGCGGGAACGGGTGGCGGCGCCGGGTAAAGGTGCAGGTCATGGAGA # Right flank : GTCGGGTCGACGTCGCTCAGCTTGATGGGGTTGTGCTCCCCGCGCCCGCAGGGCAACTCACCCGGCCTCCCCAGCTCTGCCCAGGCCCCCTCACGGCTCGCAAACCCCACCCTCCGCAGCAGCCCCCTCCTCGCCCGCGAAAAACCCCACAACCCGCCCCGCGCACCCCCCACCAGCCATCCCTCCATGTTCCCCGTCCCCCACCACCAACAACGACCCCCCAGTTCGCGCCCGCATCGCCCGGGCCCAGGGCAACGGCGTGATTACCTCGTCCCTGTGGGCGACCAGCAGCAAAGGCCCGTCCGCCGGGCCCGGTTCCACAGGTGGCCGCTCCGGAGCCGGCAGGCCCGCGCACGTGCTGGTTCCCGGGACCTCGCCGCTGCCCGGGAACATCGGGCGGGTCGCGCCCAGTACCGGGTAGGCGGTGCGGCGTTCGCCGTAGGCCGACCACTGTTCGGCGAACGAGGCGGCGTGGGTCACCTGGGAGCAGAGCAGTGCGG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 3748324-3748053 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV861362.1 Streptomyces sampsonii strain KJ40 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3748323 28 100.0 33 ............................ GAGGACGCCGATGCCCATGGCACCGCGCCGGAG 3748262 28 96.4 33 ...................A........ AGCGCTGCCGGTGAGGTCGGCGCGGCTGACCGG 3748201 28 100.0 33 ............................ GCTCTCCGACCGGGCGCACCGGGTCCTGCTCGA 3748140 28 89.3 33 ...A...T.............A...... GATGATGCGGCCGGTCACGGCGGTCTTGCCGTC 3748079 27 75.0 0 .....G.T.....AA......-..GC.. | ========== ====== ====== ====== ============================ ================================= ================== 5 28 92.1 33 GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Left flank : ACACCGACGCCGACATCACCCGAGCCGTCGAAGCCGGCGCCACGGGCTACCTGCTGAAAGCCGAACGGCCCGAGGAGCTTTTCACCGCCATCAGGGCTGCGGCTTCGGGGCGTACGGCGTTGTCGCCGCCTGTGGCGCAGAGGGTGATGACTCACTTGCGGAACCCGCAGCCGGAGCTGACCCCGAGGGAGCGGGATATTTTGCGGCACTTGACGCAGGGGCTGGGGAACCGGGAGATTGCCCGGGCGTTGTTCATCAGCGAGGCGACGGTGAAGACCCATCTGGGGCGGATTTACCAGAAGTTGGGGGTGGAGACACGGGCGGGGGCGGTGGCTGTGGGGAAGGAGCGGCGGTTGTTGGGGTGAGGGGTGGGTGGCGGGGGTGGGTTCGTGGATTAATGGGTGGGGTGGGCGGGGGGTGCGTAGGTTGGGGGCGAGAGGGAGGGGGCGATGATGAGCAAAGGGATGGCAAAGGCACTCTGAAGGTGCAGGTGGGCAAGG # Right flank : AGGAACCGATGCAAGGCCGGTGCAGCAGACAGGTCACGCCCGCAGGCGCAAGAGCCCCGTCGCTGAACGAGTGACGTTCCCGGGTTGGCCGCTGATGTCCAGCCGCCGCGAACCCGGCGGCCGAGTGGGAGCGCGAGTACTAGCGACCGCCCCCGACGGCCCTCTCCACCTCCCCCAAAGCCTCCTCCCATCCAAACCCAGCCGCATCCCCCCGCTTAGGCAAATGCGGCTCCCCCTCGGTGAAGACCACCCGCACCCCCTGCCCCCGCAAGGTCTCCACCGCCCGCCCGACCGCAGGCTGCGCCCCCAGCGCCGTGGACCAGAACGGCGCCGCGACCACCGGCACACCGAGATGTACGGCCTCGGCCGGCACCCCCAGCGCCACCGTGTCCGTGACCCCGGCGGCCCACTTGCACGCGGACGTGGTGGTGAGCGGCGCGACGAGCATCGCGTCCGCCTTGGGCAGCCCGCCGGACTGGCCGGGCAGGGTGTAACGGTGC # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 5162543-5162392 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV861362.1 Streptomyces sampsonii strain KJ40 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================== ================== 5162542 24 100.0 39 ........................ TCTTTGACCGGCAGGTCGCATCGGACCGGCGCACAAACC 5162479 24 100.0 40 ........................ TCCTTGACCGCGAGGTCGGCACCGACCAGCACCCCTCGAT 5162415 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ======================================== ================== 3 24 100.0 40 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : CCTTCTTCCTCGGGCAGGCCCTGCTCGGGAACCTCTCCGCCTCCATCGGCGACCCCGGCGTGCTGCGGGCCGTCATCGGCGCCGCCCTCTACATGACCCTCATGGCCGTCTTCTCCATGGGCGTCGCCGCGATGCTCCGCTCCCCCATGCTCTCCCTCGGCATCCTCGTCCCCTTCTTCTTCCTCGTCTCCTCCATCCTCGGTGCCGTCTCCGCCACCGAGAAGATCGGCCGCTTCCTCCCCGACCAGGCCGGCTCGAAGATCATGCAGGTGGTGGCGCCGCTGAACGACGACACCCCCTACGGCCCCTGGGGCGGCCTCGGCATCATGGCCCTCTGGGTGATCGCCGCCCTGGCCATCGGGTACGCCCTACTCCGCCACCGCGACGCCTAGCCAGACGGAACCTGGCCATCGACCGGGTGGCCTCAAACGCCGGCCAGGCTTGAGTGGCGTCAATCGCCGGCCAGGCTCAGTGGCCTCAACCGCCGGCCGGGCTACCGA # Right flank : ACCCCCCAGCCCACCCCGGGAGGGCACTTCCGCTTGGCCGGAACCGAACGCCGGTGACTATCCTCCTTACGTTGACGGGGACAACCCCGGCAAGGAACTCTGTCGACGGGTGCGGGGAGCACATGATCGAGGCCACCGGCCTGACGAAGCGCTACGGCGCGAAGACCGCCGTGCACGACCTCTCCTTCCAGGTGAGGCCCGGCACGGTGACGGGCTTCCTGGGCCCGAACGGCTCGGGCAAGTCCACGACGATGCGCATGATCGTCGGCCTGGACGAGCCCACCAGCGGCCATGTCACGATCGGCGGCCTCCCCTACCGCCGCGTCCCGAACGCCCCGCGCCAGGTCGGCGCCCTGCTCGACGCCAAGGCGGTGCACGGCGGCCGCTCGGCCCGCAACCACCTGCTCTGCCTCGCGCAGCTCTCCGGCATCCCGGCCCGCCGGGTGGACGAGGTGCTGGGCGTGGTGGGGCTCCAGGACGTGGCGCGCCACCGCTCGAAG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.20,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //