Array 1 29775-30465 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVLG01000057.1 Bacillus cereus strain AFS097130 AFS097130_95_A10_Contig57_140514, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 29775 30 100.0 36 .............................. ATTGCCTTAACTGTAAAGCTATATTCTTCAGCTTCT 29841 30 100.0 35 .............................. GGTAAATCGGGCAAATTGTCCATTGGGTCTTTTAT 29906 30 96.7 35 .....................C........ CTTGCTACACTTTCCAATAACCATGTCGGAATCCA 29971 30 96.7 37 .........A.................... TTTCAATTAGTCGTTTGTGATAAATGATTGCAAGTGC 30038 30 100.0 36 .............................. ATAAGTACAACGTCAAACTCTGTATATTCCCTTCTA 30104 30 100.0 37 .............................. CAAATGGTGGCTACCCGTGAAGGGTTTGAAATATGGT 30171 30 96.7 37 .........A.................... TGCTCTAAGACTACTGCATTCCCATACCCTCCAAATC 30238 30 93.3 36 ...A.....A.................... ATTTTATCTTCTAATGGTTTTCGTGGTCTTGGCATT 30304 30 93.3 36 .........A......A............. AAAGAAAAGGCAATGTGTGGTGCAACGAGTGTAAAA 30370 30 90.0 36 ......T..A......A............. TACAAATCTTATCATAACGTATGATTTAAAGAATTT 30436 30 76.7 0 A.....T.GA......A......A.....A | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 94.9 36 GTTGAACAATAACATATGATGTATTTAAAC # Left flank : AAAAGTATATAATCCTTCTTAAACTAGTAGCTGAATGGATAATCCAAAGGTACATCCCTTAATGGGGATGTGCCTTTTTTCGTAGAAAGGGGAATTATTAATGGATAAAAAGAAAAAACAACGTGTTAGACGTGTAATTATTATAGGGATTGTCGCAATGATTTTATTGATATACAGTGGGAACGAATTTCAGGAGAAGAATGGAAGAATCTATGCTCCTGCAAAGTATTTCGAGACGGGAACAAAATTAGTTTCATTTTAATCTTTTTCATATTTTCATCGAACAATATGGGGTAATACGGAAGTTGCCGAACGTTTTACCAGATTATTTACCAACCTAATTAATTGGTGATAACATGTAAATGTAGATAAAGTAAGGAAATTCTGCATAAATTATAAGTGAATGAGATTTATATCAATTAGCTGGTAAAAAACTTATAAACCCACGTTTCTATAGTATAATAGTGGATACAGGAAATAAAGAGCCAGTATTATTCGGT # Right flank : AGCTAAAAAATGTTATTGGTTTAGGAAGTAATATGGTTAAATAATAAAGTAGAAAGTATTATAATTTCGAAATAAAAAGCACACTCTTGATTTGAACTGCCCCCTATAAAATAGGCAGTTTAATAAGAGTTGTGCTTTTTTATTTAAAACGGAAATATAAGGTGGGGAGGATAGAGTGCTGAATGAGCTCAGTATAATTTAATTGTTTACATTTTTGTAAAATAAATAAATCGTATTATTTATTATAATATGATATCCTATTTTTAGGAGGTGTGAAAATTTGAATTTTGAGTTAATAGTTACAACTTTATTGAAAGAAGATCTTCACTATGAGGATAGTTTGCAATTAATTGGTAGTTTCATAAACAAAGTGATGCTTCAAAGTGAAAAATTAAAAGCCTTGCATGAAAGAAAAGGTTATAAAAATTATGTTTTTAGCAATTTTTATCCATTTGAAAAAGATAAAATATACAAAAGTGGCCGAGTGTATGTATTTCGAT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATATGATGTATTTAAAC # Alternate repeat : GTTGAACAAAAACATATGATGTATTTAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 39643-39869 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVLG01000057.1 Bacillus cereus strain AFS097130 AFS097130_95_A10_Contig57_140514, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 39643 30 100.0 36 .............................. GTCATAACGTCACAACACCTCCTAGTGAGAGTATTC 39709 30 100.0 35 .............................. TATACCTGATACGATGTAGTTTTATCACCGTATGT 39774 30 100.0 36 .............................. AGATTTAGAGAAGAAAGAAGTTAAAGATAATACAGC 39840 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 99.2 36 GTTGAACAGAAACATAAGATGTATTTAAAC # Left flank : AATTCTTTTATTCCATTTAATCTAAAGGAGAAAAAATAATGAAAAATCAAATGAATGCTAATTATGCGTTTGTTTTTTATGATGTAAATGAGAAACGAGTGACGAAAGTTTTTAAAATCTGTAAAAAATATTTAAATCATTATCAAAAATCTACTTTTAGGGGGGGGGATTACTCCCTCAAATTTATTAAAAATGGAAAAGGAAATTAGGAATATTATAAATGAGGGGGAAGACTTAGTTACTATTATCAAAATGCTAAATGAATATAGCTTTGATGAGATTGAAATAGGGTATAGAAATAATAGCGATCTCCTATTTTTGTGAATTTACCAAGTGAAATGATAGTGGGAATCTAATAAACTTTGTTAATTCAAGACTTATACTATTTCTTTTTGAGAATTTTATTTTTTTTATGAACTGCTGGTAAAAAAATCACTAAACTCATATGCAGTATAGTATTATATAAAATATGAAGGTAATAAAAAGTTGATTTAATCGGT # Right flank : ATTTTGGTCTATTGATTTTACCGTAAGTACGTAACTTGTTGAACAAAATTCTTAAATTAGAATTGATTTCGAGTAACTCAATAGATAAGCTAAAGGAAAATTTTTAAAGAGAGAAGTTTTTTCATAGAAAGGGGAATTAAGAGTAGGAAAATCTATGCTCCTGCAAAGTATTTTGAGACAGGAACAAAATTGATTTCGTTTTGATAATAATTTGGTCTCTTTTACCAACTATAGTGAACAAATCTGCATGACATGTACTATAGTTGATGTTATAATATGTGTAGAAGTATTATAACAATAGTTTTTGCATAAACTAAAGAAGACGAAGTGCTGGTAACACTTCGCCTTATGTAACAGCTACCGCAAGGTGGTTGGTTACTAAAAATTTAGTTATTTTTTATTGAACCACCAAGTACGTTTGCGGCGTTGGGTGGTTCTTTTCGTTTTTCGTCGCTTTTTTTGTCTTTTTTTTCAAAACGTTGATAGGTATTTCCCTATAT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGAAACATAAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //