Array 1 5278-6232 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NSLY01000013.1 Prevotella intermedia strain WW2834 NODE_13_length_70737_cov_13.1404_ID_22033, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      5278	    36	  94.4	    29	..G..........T......................	TATTAATTTTTTTAACACTGGTTTTAAGT 	
      5343	    36	 100.0	    29	....................................	CTAAGGGATTATTTTTTCATTTTCTGATG 	
      5408	    36	 100.0	    30	....................................	CGATAGTAACGTTATTAGCTATCGTTACCC	
      5474	    36	 100.0	    30	....................................	CATTGAAATCAATCTTTGGATTCTTATAAA	
      5540	    36	 100.0	    29	....................................	CTCTTAAGAGTTTTATAAACTTACATTGT 	
      5605	    36	 100.0	    30	....................................	AAGTGCATCATTATTTTGATTTGTACCTGA	
      5671	    36	 100.0	    30	....................................	TAGGGTCAATCTTGAACTCACTACCATCTT	
      5737	    36	 100.0	    30	....................................	TAACAACAGGTGAACGAAAACAAAATGATT	
      5803	    36	 100.0	    29	....................................	CGAGATACTTCTCTAAGTTTATACATACT 	
      5868	    36	  97.2	    30	.....................A..............	TTGCTACGAGTAACGCACAGAAAGTAATAA	
      5934	    36	  97.2	    29	.....................A..............	TGAAGCTCTAAAAGCTTGAAATCCATTAA 	
      5999	    36	 100.0	    30	....................................	TGATTCATGAAGCTCCAAATAAATCGGAGT	
      6065	    36	  97.2	    30	.....................A..............	CAATAAGGAGTGAAAAAAACAACAACAGAA	
      6131	    36	 100.0	    30	....................................	CATTCTTTGAATCCTCTTCCAATAAGTAAC	
      6197	    36	  94.4	     0	..........................C.C.......	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	  98.7	    30	GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	                              	       

# Left flank :   TTGAGAACATTAAACGTGCGCACTATGAAGCTATACTGAAGGCACACCAAAGCATTTATAAATTGCTTAGGTTTACCACAGACACAGAAAACGACGACTGCATACTGGTGTGGGAACAGCCTAAGGATGGCGGAGAGAAAACTTATTACTTCAGACAAGCCAATATACGCCAATTCTTCAAAGAGCTAACCGAAGAGGTATACAACAAAGGCAATGGCATCTATCTATCAAAAGAGGTTATGTCGCTGATATTTAAATATAGAACCCTTGTTCATAAACTTTTGCTTGCTGAAAAGAACAACCCTGATGAGAAGATAATGATACATAATCGAGAGGTTGTAAAGGAAATGATAGAAATTAACCAGAGCCTCTCAATACAAATCAGAAAAGATATAGATTTACAACAACGAAATTTATATAACCATAATAAGAAAGGAAAAAAATACTGGTGGAAAAGAAAGAAACACAACATATAAGAATCAAACAGTTAGGTTAGGTGC
# Right flank :  CTTATTAACAAGCAAGGGAATGGAATTGGGGGAAGTAAAAACGGAAGGGGGAACACGCCTTCCTATGGGTGAAGAAAGGCGAGAAAGGTGTAAATATTTTTCACAAGCAAAACTATTGCGTAACCACCTCGTTATCAGCACATTGTAAAAGCTATTGTTTTGCAATGCGAAAGCGTAGGTTTTACACGGTAAAAGCGGCTCTTTTGCGTTGCAAAAGAGCCGCTTTTGGAATGTAAAATCGAAATTATGGTTTTTCTATGGAATTATCTTTACAAAATAGGGGTGGTTTTACGTCGTGGAAAGTGTAGAGGTTGTGGCGTGGGTTCGGACGGTAGCAGAATGGCGGCTTTGCCGATAGTGCGACATTGGCAAGGGTGGTTGGGGCTTTTGCATCGGCTCGATGCGGTGGCTCGTTCGGTTGTGTTGGCTTCGGTTGATGTGCAACGACGACATGAAAGCCGCTATACAGAGCAAGATAAGATGTTTTCTCATATCGTTAT

# Questionable array : NO	 Score: 3.20
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC
# Alternate repeat :   GTTGCATCTGCCTGCTGTTTGAAAGGTAAAAACAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.50,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [2-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.05,0   Confidence: HIGH] 

# Array family : NA
//