Array 1 8770-8931 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOJQ01000071.1 Anoxybacillus pushchinoensis strain K1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 8770 29 100.0 36 ............................. GATGAGCGATTTAAAAATTTTATTTCAATTGTTATG 8835 29 100.0 39 ............................. ACGAACAATTTTACTTGGTGGAAACCGAAAAATACGGCC 8903 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 3 29 100.0 38 GTTTTATTTGAACGTAGTGGGATGTAAAG # Left flank : TTTCATTGGCGATGAACCTTATAAACCGTTGAAGGCATGGTGGTAATATGTTTGTAATTATCACGTACGATGTTGGAGAAAAACGCGTGAATAAAGTATGCAAAAAATTAAGGGAATACTTAACATGGACACAGAACTCTGTGTTCGAGGGGGAAATCACAAAAAGTTTGTTGATGAAATGTTTAAATGAAATTGATCAAATCATTGATGAAGATGAGGATTCCATTTATATTTACGAGGTGGCTAATCCGAAGAACATCAAAAAGCAAGTGTTTGGACAAGAAAAAAACTTTGATGAACTCTTTCTTTAACAGCTGCAGTGAACCTCTAATTTCAAAAAATAGGTTAAAACGCTTGATATATCAACGAAAAATGCGGTATTTTTAAAGAAGAAGAAAAACACAACCGGCACTTTACTGCAAAACGCAGAAGATTGTCATATCAACGCTTTCCAAAAATCGTTGATATGACAGCACTTTTTGCTTTTAGATTTTAGGGGG # Right flank : TTTAT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTGAACGTAGTGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 629-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOJQ01000089.1 Anoxybacillus pushchinoensis strain K1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 628 29 100.0 36 ............................. TTAAAGGACGATTCTCATTACGCTCCCAAGCGGAGA 563 29 100.0 36 ............................. CCGTTGTTTCCATGATGTGATGATAGAAAATGGATC 498 29 100.0 37 ............................. CAAACGCACAGCATAAAGAAGAAAAAGGGCAACCGAA 432 29 100.0 37 ............................. CAAACGCACAGCATAAAGAAGAAAAAGAGCAACCGAA 366 29 100.0 40 ............................. TTCTGTCGGCATTTCTACCGTTTGTGTCATGCGCAGTTGC 297 29 100.0 37 ............................. TCATGACAATAGAACAGTATACGGGGACGATTGGCAG 231 29 100.0 35 ............................. GTGACACCAAGCAGCATCTGAATTTTCTCAGCTCC 167 29 100.0 37 ............................. AGAAAAACGAAGATGATATTACACCGCATGTTGGCGC 101 29 100.0 38 ............................. ATCACCTCGCTTTTGTGAGTAGCATAACCAAAAACGAA 34 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 10 29 100.0 37 CTTTACATCCCACTACGTTCAAATAAAAC # Left flank : ACAAGCAAAAGCGTCAATTTCGCAAACACATCATGTATCTCACGCAACGCATGATTTTCGCCACTAAGAAGATGTGGAAACACAACTTTCGAAATCAGAATACCTGTCACAATAATCCCCGTCATCGAAAGAAGCAATAATACATTTAGCAAAAAACTAAATCTCGTTTTCCCCGAAAGCGAACGATCGAATATTTTTTTCACCGTATGGACAACCCATTGATAGTTTAATCCAATATGCACAAGCACAGCGACACCAATCACTAATCCCGCCACTTCATGAAACAGTAAGCCATTAAACACCCGCGGATTCATTAACAACACAAACGTAATCGCCAACGATACATCTAATATGATTTTTACAATATTTTTCCTCAACACATATCCCCCCGCATTCACATATCATTTACCGTATACCGTAAATGTACTAGCCGATGGTGAAAATTAAGTGAAAGGGGGAAGTTTTTGTACAAATAAAACCTATCTATGTGGGAGTATCGA # Right flank : CTATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACATCCCACTACGTTCAAATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //