Array 1 23859-22767 **** Predicted by CRISPRDetect 2.4 *** >NZ_APUN01000110.1 Neisseria meningitidis 2005172 gnm2005172.contig.109, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23858 36 100.0 30 .................................... CGATTTACCACCCATAAAACCACCTCAAAA 23792 36 100.0 30 .................................... TAATTTGCGTTTCGTGTCGCTCATAAACCC 23726 36 100.0 30 .................................... TCATAATTGTATAGGTAAATGTCATCAACA 23660 36 100.0 30 .................................... CTGATGAGTTCTCTACGCATGGGACGTAGG 23594 36 100.0 30 .................................... GTGCATTCTGCCTCGTCGGCTGGTACGTAA 23528 36 100.0 30 .................................... TCAGTTGTTTGATTTAAGCAAGATTCCTGT 23462 36 100.0 30 .................................... GCGTAGAACAACCGGCAATGACTAATTTTG 23396 36 100.0 30 .................................... TGAAGTTGCGCCGATTGCACCAACTGATGC 23330 36 100.0 30 .................................... ATCCGTTTGAGGCTAACAAGCCAGCCACTA 23264 36 100.0 30 .................................... AAATTCGAGCAAAGATAGAAGCAACTTGTT 23198 36 100.0 30 .................................... TGAGTTGTAGTTGTAGCTAGCATCAATAGA 23132 36 100.0 30 .................................... AAATGACGATGCGGAACGATTCAGGCAGAG 23066 36 100.0 30 .................................... GTGTGCCTCACTGTGCGCATTAAGTTGGTC 23000 36 100.0 30 .................................... AATGACGAGGCTTTGGATTGCGAGGATTTA 22934 36 100.0 30 .................................... TTTTATGTTTCATATGGACGCGGTTTGGTG 22868 36 100.0 30 .................................... AGTATTGGTCGTGACGACTGTCCTTGCTGT 22802 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : AGCTTA # Right flank : ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATGCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCAGTTACGCCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //