Array 1 12639-13530 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RCYT01000010.1 Streptococcus salivarius strain bf_0095 Scaffold_0010, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     12639	    36	 100.0	    30	....................................	TGTTCAGTTCTTTTGGTCGTACAATCCACC	
     12705	    36	 100.0	    30	....................................	AATCGAATACAAGAGAATCGATACAGTTCT	
     12771	    36	 100.0	    30	....................................	TAAAATGTGACAAGTAATATCATAATCAGC	
     12837	    36	 100.0	    30	....................................	CACAGCCAGAAGATGAAGTGTATGGCTACT	
     12903	    36	 100.0	    30	....................................	ATCTGAGAGGTATTTCTGATTGGTATGATC	
     12969	    36	 100.0	    30	....................................	TATTGACGGCTCCATCTGTTGTCCACGTCG	
     13035	    36	 100.0	    29	....................................	TTTTTTTATTCCTTCCCTCTTTTCCCCTC 	
     13100	    36	 100.0	    30	....................................	ACTGGTCTATTCGTTTTAAAAACCGTGCAT	
     13166	    36	 100.0	    30	....................................	ACAAGGGCAATCCTAAAGTCGAATGGATGA	
     13232	    36	 100.0	    29	....................................	GAGGTGATAATAATTGCCGATATTTAATT 	
     13297	    36	 100.0	    30	....................................	CCACTAATGCGGACGGCAGAAAGAACGGTG	
     13363	    36	 100.0	    30	....................................	CTGAGTTGTTACCGATAGAACCGACGCCCT	
     13429	    36	 100.0	    30	....................................	CGCAGTTAGTTGAGAATGACACGACATTCC	
     13495	    36	  94.4	     0	..................................GT	|                             	
==========	======	======	======	====================================	==============================	==================
        14	    36	  99.6	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                              	       

# Left flank :   TTGATAGTTTTGTCTCAGAGGAATCTTATGATAGTTTTTATAAGAAAATTGGTCAGCTAGCCCAAAAGTATCCAAACCTAAACTTTATTTTGTTTCCTAGTGACCAAGGATATCTAAAGATTGACGAGGAAAGTAGTAGGTTCGTCAATATTTTATCTGACCAGGTGGAGCATTTGTACGATGTTGAGTTTATGTATGAAAGGGTAAAGAAACATTATCCAAGTAATAATTTTCCGACGCGAGAAGGTTTTAGGATGTCCTTAGAGACTGTGACGCCTTATTTGTTAACAAAAATGACGAGACAACCTAGTCTCTCACTCGTTGATTCAGTAATTTTGAATATCTTAAATCAGTTGTTTCACTTTAACTATTGTATAAGATATTCTCAGACACCTGATGAGGAGCTATTACATAGATATTTAAAAAGTAAGAATTGACAAGTACAGTGATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG
# Right flank :  TTTGATTCAACTTAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACACGATATACATAAGGATTGTCAGGCTGTCCGACCTCTTTGACCTCAGTCAAATTAAGGATAGGCAGGCTCTGTTTGAGATTTTGATAATAATCCACAGTGATGGTACCAGTGACTTTCACCCAAGTATTGTCCTTGAAGGTTTGGTCACTTCCTGTCGTTGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATTCCGAAACGGAAGATGAACTGATAACCCTTGGTTTGTGGGTCATTGTAGACAAAACCGGTATAGGTGACCTTCTTGCCCACAAAATCGTTAGGATAGAGGTAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTCTCACGTCCCTTGTACTTGGCGAGCTCTCTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCTGGCTTCAAGTACTGAATAG

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.37   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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