Array 1 188598-183039 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAXR01000004.1 Legionella pneumophila subsp. pneumophila ATCC 43283 Scaffold3_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 188597 28 100.0 32 ............................ ATTTACACGCCAGAGAAATTATATAAAGTCAC 188537 28 100.0 32 ............................ TATTCAGAAGAAAGAACTTACGAAATTATTGG 188477 28 100.0 32 ............................ ACATCTCTTTAAGATCAAGAACAGTGTCCCAT 188417 28 100.0 32 ............................ ATTCGCTAAATTTAAAAACATATAAGACATAT 188357 28 100.0 32 ............................ TATATAATCCTATTACAGTAGCTTTATATGTA 188297 28 100.0 32 ............................ TAGATAATTACCTCTCTCAACTTGCTGTCTTT 188237 28 100.0 32 ............................ AAAAACTTTCATTTGTTAGATTACGCATCTCA 188177 28 100.0 32 ............................ ATTATCTGTTACTGGATTTTTGAATATCTCTA 188117 28 100.0 32 ............................ TCATTCAGATGTAGCCTCAGCTTTAATAAATA 188057 28 100.0 32 ............................ GTCATCTTGAATAGACATTTTAACAGTATGTA 187997 28 100.0 32 ............................ TAAAAATAATAAAGTTTCCATTTTACTTGACT 187937 28 100.0 33 ............................ GCACATAGTGAGAACATGGAAATATTTAATATG 187876 28 100.0 32 ............................ ATCGTATTGTGTCTCCCAATAAGTAACTTTTT 187816 28 100.0 34 ............................ TGACATATAGATTTCGCAGCATCAGCATAACTTT 187754 28 100.0 32 ............................ TAACACTTTAACCATTCTTTCCCACGCATCTG 187694 28 100.0 32 ............................ ACTTCCTGCTTAGGTCGAGCAAAAAAGTTTTG 187634 28 100.0 32 ............................ CCACAGGTATTGTTTCAATTGTATCGGACACG 187574 28 100.0 32 ............................ TTGCGAATAAGATGCATCATAAAACTTGCCTG 187514 28 100.0 32 ............................ AAATCCTCACTTTTCAATTTCTTATTTAATAA 187454 28 100.0 32 ............................ TGAAACTCACCATTTTTTAATAAAGGTTGGTT 187394 28 100.0 32 ............................ TAAAAAGCATGTTTTGTTAAAATGAGGAGATA 187334 28 100.0 32 ............................ ATTTGCATAACCAGTATCCGCAGGACTAGTCA 187274 28 100.0 33 ............................ CGATTGGGTAAAAGAAGTACCAGAAGGCTATCA 187213 28 100.0 32 ............................ TTGCAGCCAAATCAAATTTATTATCGTGAGCC 187153 28 100.0 32 ............................ GCATGGGCACCGAAAGGAACAGCAGACATTAC 187093 28 100.0 32 ............................ TATAAGAATTACTGCTTTAGCCCAGCTTATTG 187033 28 100.0 32 ............................ TAAAAGATTTTTATGTGGTAACTGTCATTAAA 186973 28 100.0 32 ............................ GATAATGGGTTTGCTCGAAAAGAAGATAATGC 186913 28 100.0 32 ............................ GGAAAATTGTTCCAGCCTCTTCGTTTCTAAAA 186853 28 100.0 32 ............................ GTTACCGCAGCACCTAAATTGAATTCTTGTTT 186793 28 100.0 32 ............................ TACGCAGGTTGCTTCTTTGGTTCATAATAGTC 186733 28 100.0 32 ............................ TAAAGTAGCTGCCAGCATAGGATTAATACCCG 186673 28 100.0 32 ............................ TGATGATTCTACGGATTATTTAGTTCCCACGA 186613 28 100.0 32 ............................ TATTACTGAGGCGGGGAAAAGATAATGGCAAA 186553 28 100.0 32 ............................ TATCGCGTTTATTATGTGCACTTTTTCAAACT 186493 28 100.0 32 ............................ TAACGTAGACACACTAATAAAAGCAGGTAAAA 186433 28 100.0 32 ............................ AGATCCGGGCGGAGAAAAAGGAGCTACTAAAC 186373 28 100.0 32 ............................ AATTCTCAGAAATAAATAAATGTTTATTTATA 186313 28 100.0 33 ............................ GGTAGACACTGGCCTTTTTAAATCCAATTGGGT 186252 28 100.0 32 ............................ ATTAAAAGCCTTGCTGCTGCATGTAGTCTATG 186192 28 100.0 32 ............................ AAGAAACCGGGGAAGTGAACGACGCATATCGC 186132 28 100.0 32 ............................ TGCTGAATTGCGCGTGAAATTCTTTCTGATAA 186072 28 100.0 32 ............................ AATCCTCAGCCCAATGATTTTCAGCATCAATT 186012 28 100.0 32 ............................ AATCACAAGTTTACGCCCACCTAAAGTTTTTA 185952 28 100.0 32 ............................ TATGACCTCCAATCTTCTTTCATGGTCATTAT 185892 28 100.0 32 ............................ TTATGATACGCAGGGCAATATATTGCGTAGAG 185832 28 100.0 32 ............................ TTGGGAAAATTCCCATATTGCTTTTGCACCAT 185772 28 100.0 32 ............................ AGCGTGACAAATTAATCAATAAGTACAATAAT 185712 28 100.0 32 ............................ TTGAAGAGTACATTGGATATTCAATTAGTGCT 185652 28 100.0 32 ............................ AATATGGATAAGGCTTAAATGGTCTGGTGCCC 185592 28 100.0 32 ............................ TTAGGGGATTGTATCGCCCCTGGCGACGGATA 185532 28 100.0 32 ............................ ATCATACTTCTTTTATCAACTTTTTGTGTTGC 185472 28 100.0 33 ............................ ATTATGGATGCTGTTGCAAAAGGCGAGCTCACG 185411 28 100.0 32 ............................ GCCTAAAAGCCGAGGCGGACGTGAATTTTTAT 185351 28 100.0 32 ............................ AATTAATGTTAATCCTGTACCTCAGACTAGTT 185291 28 100.0 32 ............................ AATTATCCCAAACAAGACGATACGGAACAGCA 185231 28 100.0 32 ............................ GCTTGCGCCATGCGCTTAACTATTGCCCTCTC 185171 28 100.0 32 ............................ ATACGCACAGCTTAATGAGTGTTATTGGCGCG 185111 28 100.0 32 ............................ TACAATCTTGTTTAATGATGAATTAGTCAATG 185051 28 100.0 32 ............................ TCTATCGTTGGCCTATGTCTTCCGTTAATCAT 184991 28 100.0 33 ............................ TTACAACATCGGCCGCCGCGACGGGAACAGTTC 184930 28 100.0 32 ............................ TATGAAAACGAACGACGTGAAACAGCGTAGGA 184870 28 100.0 32 ............................ TTACCACTTTTGGTATCATCATGTATCTGGAT 184810 28 100.0 32 ............................ AATAGAGACAGCCAAAAAGAACTGAAATTTGA 184750 28 100.0 33 ............................ AATACGGCGAAATAGACGAAAGTATAGACTTGA 184689 28 100.0 32 ............................ GTCTTCGTGTGTAACCTCGTCTTTTTCGTCCT 184629 28 100.0 32 ............................ CTATGAAGACGGTCTGCACGGAGAACTCGTTA 184569 28 100.0 32 ............................ TGTAGCGGAATCAACGCCGTACGCCTCTGGTA 184509 28 100.0 32 ............................ GATCAATCAGATAATCCACAAGACTACATTCG 184449 28 100.0 32 ............................ TACGCCTCCGCTTGACGACTTTAAGCCCAAGG 184389 28 96.4 32 ....................T....... TTATGTGCAAAAGGGCGGTAAGGCATGGCAAT 184329 28 100.0 32 ............................ GCAACAAAAATGGCGCTAGAGGGCAACGAAAA 184269 28 100.0 32 ............................ TATCGTCAACAGAGTCAAAGTATCGCCAGCAG 184209 28 100.0 32 ............................ ACTTACCCCTCCAAGGGAGGTGGTGCGGACTC 184149 28 100.0 32 ............................ AGCGCGTAAAAATCCTATCGAGAGGTCAAAAG 184089 28 100.0 32 ............................ GATAACTGGCAAGACACCGCTTTTGCGTGGCG 184029 28 100.0 32 ............................ TTACTCCCAGCTCAATGAGTGCTACTGGAGGG 183969 28 100.0 32 ............................ GCTCTTCGATCGTCGGCCTATGTCTTCCGTTG 183909 28 100.0 32 ............................ TTTGCAGCTCGGACATCTAATCATTTCCGTCG 183849 28 100.0 32 ............................ TGTGCTAAAAGTTCCGTTTGCTGTTGCTTTGC 183789 28 100.0 32 ............................ TACCAAGGTATTGCTGAAGCAATGGCCACTCA 183729 28 100.0 32 ............................ TTTTTCTCCGGCGGAATCTGGATCAAGCCATA 183669 28 100.0 32 ............................ GAACTTTCTGCTAGCAAGTCGAGCGATATAGA 183609 28 100.0 32 ............................ TCACGGTCTATTGTGTCGCCCTCAATTTGTCA 183549 28 100.0 32 ............................ TATGTTCAGAACCAACTCACGAATATCTCTCT 183489 28 100.0 32 ............................ AACGGCTTGAAATAATCCTTGGGCATGCTCGG 183429 28 100.0 32 ............................ TCTTCTTGCTCTTCAACAGCTTGCTTAGTCTC 183369 28 100.0 33 ............................ ACTGATTTAACAGCACAGATGGAAGCATTGAAA 183308 28 100.0 32 ............................ TCTCTGTAGTTTTGTTCAAAAACAGGGTATGT 183248 28 100.0 32 ............................ AATACATCACCAATTTGAATATCTCTAATCGT 183188 28 100.0 34 ............................ ATTTAGACGAATTTGTCGCGGCCGATTTAAGTAT 183126 28 100.0 32 ............................ AAGTAAATCCAGACCAGATATACATTCTTATC 183066 28 67.9 0 .............T......TGGGTTGG | ========== ====== ====== ====== ============================ ================================== ================== 93 28 99.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGACACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTACGGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : TATTGGTTAAGTCGTATAAGAGGAGTTAAATCGGTATAATTATCCGAAGAACTGGGATGGAAACTCATTAAAGAACTAATCCCTGATATTAAATCTAAAACGGCACATTATGAGCATGCGCTATTAACCAAAGGGCATGCAAGACCCTGTAGGGTAGTTACAACTTATCGTCAGCCCAAAGGGAGAAAAGTAAAGACATCACGAGGAAAAATACCTCAACATTATCCAATGGAAGTTATAGTCAAGCGAATAAGGAGCCTTGGATTTTAGCTACTAATTTACCCTTGGATGTAGGGCCTGTTGATATTATCAATCTCTATTTTAAAAAAATGCAAATAGAAGAATCATTTAGAGACGTTAAAAGTCATCAATTCGGACTGGCGGGGCGGTATCTGCGTACTCATTCAGTTAATAGATGGGGCGTTAAAATGCTTCTTGCTGCTATTGTGGAAATTACTTATTGGGTTATTGGAGTGATTGCCCATAGTCAAAATAAACAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //