Array 1 5604-6365 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASZQ01000104.1 Microcystis aeruginosa SPC777 contig000104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 5604 35 100.0 35 ................................... CTCGGTTAACACGTGTAGTGAATGCCAAAGCATCT 5674 35 100.0 38 ................................... TGCGGGATTTCCTGGGGTTGGCAGAACAAATATGTATT 5747 35 100.0 41 ................................... GATCAAACCAAAGCACCAGGGCACATAGTGCCCCTGAAATA 5823 35 100.0 35 ................................... CAATTGTCTCCAACAATCCGTGGCAGAAATAACGC 5893 35 100.0 37 ................................... TGGGTATAGATTCCCAAACCCAAAGCAATCCCTGCTT 5965 35 100.0 31 ................................... TTTAAGAAGATCAAGATTCTTCTATAGAAGA 6031 35 100.0 38 ................................... CATGTGTTTACAAGAACTTGTTGTCCTTGAACTTAACT 6104 35 100.0 44 ................................... TCCCTTTAACGAGGGACGCCCGCTTTGGGGTTATTTTTATTGTG 6183 35 100.0 39 ................................... GCCTGTTATAGGCCGGCATTGAAACCACAAAGAAAAATC 6257 35 100.0 39 ................................... GATGTGTAGGGTCAATTCATGAATTGACCCTACAATTTT 6331 35 94.3 0 T..A............................... | ========== ====== ====== ====== =================================== ============================================ ================== 11 35 99.5 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : AGAAATTCTCGGCATCATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTAAGTAGTCATGCAAAATAAATTTCCCAGTGAAGATAGGCAAGAGGCAATAGGCAAGAGGCAAAAGCTTCATCGAAATGTGTAATTAATTTTGCTTGGGTACTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCAGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : CAGAATGCCAGGGATCAATCCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCGAGATTATGCGTCAGTGGGGACAACAATTTCAGAGGAACTTTAACCAGACCGAACTCGGCAGAATAATTTATGCGGGAGGAGATGATTTTTTGGGCATCGTTTATAATAGCCAATTTCCTGATCCACAACTCGACTCGATCGAGATCGATCGAGTTCTCCACTGGCTACAAACCCCTCATAAGTAGGGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGTTTTGTGGCTTTTCTCGTGAAACAGGTGCAAGATTTTGAGAGAATCGTGCTTCAAAACCTTGCGTCTTCATCGGCCCGCGTCCTGTAGGGGCGAAGCATTCGGGCAGTAACCTATCGGTGAAACCGTAGATTTTCTATCCCAATGCTTCGCCCGTACTTTTTCAGCAAACCCTAAGTAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 8492-9903 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASZQ01000104.1 Microcystis aeruginosa SPC777 contig000104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 8492 35 100.0 38 ................................... CTCGAACTTCCTGTTCAGTCTTATTGTCTAAATTCATT 8565 35 100.0 36 ................................... GTTGTTTTTCGAACCCATGATCTGGAGTAAGCGAAT 8636 35 100.0 33 ................................... GTACTAAAAACAGTACTGACCCGAGGGCAGCTA 8704 35 100.0 38 ................................... TCTTTGTCTGGTGCTATAAAGCAACCAGAAAAGCTAAT 8777 35 100.0 36 ................................... CGGGAACTGCTCGGCAACGAATTCAAGTGGGACATT 8848 35 100.0 39 ................................... TACAGCCTCCCACAGTGGGGTAGCCATCTGTGCCTCTTT 8922 35 100.0 46 ................................... AATTTCTTGCCAGGAGTGGCCAAATCGAATTAGCCTAGCGACTCGG 9003 35 100.0 38 ................................... CACAAGGGTTTGGGGGTTTTCAAAACTTTGACTAAACT 9076 35 100.0 35 ................................... GTTGGGGTTGGGCTGTTTTTAGGAGAAACAAAGAC 9146 35 100.0 41 ................................... ATACACTGCGGTTTTATACCCAGCGTACAGCCGGACAAAAA 9222 35 100.0 35 ................................... CGTAAGCGATCCACCTCATTCTGCAGCAGGAGGAT 9292 35 100.0 39 ................................... CGGTAAGGGCCAAATTGTTCTCCTGTGGGAGACAAAACC 9366 35 100.0 37 ................................... GAGAGTCTATGCGCTCCCATAGCACCTCTACTGTCCA 9438 35 100.0 35 ................................... TTCTTCCTCAGAAATGCCTAGTACAGTCATTAGAG 9508 35 100.0 41 ................................... GAATCGCCGCGCTGGACTTGTTTCCAGTGGATTCCTTCTTT 9584 35 100.0 36 ................................... GGCTGAGAAAACGCCAACGGCTGTGCGAATCATTGC 9655 35 100.0 35 ................................... TAGCTAAACAGGATGATGGCGTGAATTATGCCATC 9725 35 100.0 35 ................................... TAGCTAAACAGGATGATGGCGTGAATTATGCCATC 9795 35 97.1 39 ..................................A GATGTGTAGGGTTAACTCATGAATTAACCCTACAATTTT 9869 35 74.3 0 T..AA........A..T...T.CC.....A..... | ========== ====== ====== ====== =================================== ============================================== ================== 20 35 98.6 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : TTACGATTCATCAAGTTGGTCATCGTCGAGATATTTATTCTGATTAGTTTTAGTTTAATTACTTCCATTCCAAAAAATTGCTCCTTCCAAAAGCGATCGCCCCTCCCCATCATCAAAATCTCCAAAAAAGTTGCTTATCCCAAAAGTGATCGCTATTCCTCATCATCAAAAAGCGATGTCGTCTTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACAAAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : CGATACTTAATTAAGAAAAATCAATGAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTATTAAACAATCGAGTTTTCTATAGCTTTATGCCCAAATATATAGCCATCACCTTCTCCCCCGTCCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCCGAGCAGTACCACCTAATTAGCCCCGGACTGCTAAACTCCCAACAGGGAATGCCCAACCGTGTTCTCCTGAAAGTCGATAGCGAAATACAGTCCTCCTCCTCCGAGGAAATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAAT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 7092-7788 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASZQ01000013.1 Microcystis aeruginosa SPC777 contig000013, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 7092 36 100.0 39 .................................... TGAGTCAACATACGATTCCGTGGATAAAATGACTCTAAC 7167 36 100.0 40 .................................... TCCCCGCCCAAAGTTTTACAGTCATCAGCGACACCACCCT 7243 36 100.0 34 .................................... GGCAAAAGTCACTCGCTGAAAACACTGCCCTGCG 7313 36 100.0 36 .................................... TGATTTCCTGGGTAATCTTCGATAAGAATGATTTCG 7385 36 100.0 36 .................................... GACTGTGGGAGGCTGTGATAAATAGCCTTTCATAAA 7457 36 100.0 36 .................................... CATAATAGGCGTCACAATAGCAGGAATAGCCTGCTT 7529 36 100.0 38 .................................... AGCAATTTGATTTTAGTTTTAAAGGGGTCGGACGAGTT 7603 36 100.0 42 .................................... AGGCAGTCCATTCATTACAATGGTAGTTGATTGTAAAACTAA 7681 36 100.0 36 .................................... ACTGTCCGGCATCGAGCCAACGCTCTCCCCTCAGGA 7753 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 10 36 100.0 38 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : CCGATATTCCCGCTCAAAAGGTCGCTTGGGGTAGTCCCTGTCGTCCTCAATACGATAGAAAGATGAATTCTTATAGCAGTTAAGCTAAGAGGCATTTTTGGCGGTCTTCCGCTCGCTTTTGTCCCACTGTTTCCCACGGGACATATTAAGCTGTTCGTAATTTAATTAGCATTTTTATCGATTTTTGTCAAGATATATTTGACACAATTTATTAGAAAAAGGGTTTCTAATTAAAGAGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGTAGGATGGGTTAGCGGTAGCGTAACATAATCGGGCGTTGGGTTTCATGCTTCAACCCAACCTACGTTCATTTTATATTTAATTCCACCCACCTACTTATAGATATTTCGACAAAATTGAAAGGCAGAAAAAGGGTTTATAAAGAAACCCTTTTTCTA # Right flank : GAGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAAATCGACGCATCTCCAAAAAGGTGGTATTGAGGGGGGTAAAAGTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACACATCTAACCAGAGAATCGGGGTTTTAGGTCGGGGAGGGGGTGCATCGATTTTCAGTCAAGAGTTAGGGGACAAGCTAGATGATGTAGAGATTTGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAACAATCTAGAGACAGCTTCTTCGGAAATCCCATAGAAGCGCACATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTCGATGTGTAATTAATTTTGCTTAAGTAATTATCTGTAATTAAGTAGCTGGTTATAATTAAATTAAAAATGGATTTTAGGTTCGATCCCCCCTGCCCCCCTTGATAAGGGGGGTGCCGATAGGCGGGGGGATCTGACAACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 14308-12890 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASZQ01000198.1 Microcystis aeruginosa SPC777 contig000198, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 14307 37 83.8 34 .AAG.......G.....G..T................ AATTACACCCGAGTTAACAACGGGCGATCAAATC 14236 37 91.9 36 .AAG................................. AGCTTCCAGTGGGAAGGGGAGATGTTTGCGGGTAAG 14163 37 100.0 38 ..................................... ATATTTTTCCCCGGTGTAAACCACTGGGAATTATCAAG 14088 37 100.0 36 ..................................... TTGTAGCCAAGCCACGCTAACCAAGTTGCGCGAATC 14015 37 100.0 35 ..................................... TTCTTATCTAATCCCTATTAGGGATACCCCGAAGC 13943 37 100.0 36 ..................................... TGTTTACCATTCTTAAGATTTGGGAAGTTATCCCTA 13870 37 100.0 36 ..................................... CGAGAAAGATTGAATACCCTAACGGGACTAGCCCAT 13797 37 100.0 35 ..................................... TGGCTAAATCCATACTTATATTCCTATAATGTTTT 13725 37 100.0 35 ..................................... GATTTTTTACTAGAATACTGGCCAAGCAATCAGAT 13653 37 100.0 35 ..................................... AGGTAAGGTTAAGCCTTACGTTAATCGTAACAAGG 13581 37 100.0 37 ..................................... TTTGTAAAATTGAAAACGATAACTGGGTGAAAGCCAA 13507 37 100.0 35 ..................................... CCATTCGTGATCAAGCATGAATGGGCATTCAGGAA 13435 37 100.0 36 ..................................... AATTTTGGAAAATAGCCAGCAAATTTGGACAGCAAG 13362 37 100.0 37 ..................................... ACTTTGTTTGCAAACTACTTTCTCGTTACGCTCTTTT 13288 37 100.0 36 ..................................... ATGGTAATTTTCTATGATTTTACCACTCCCGAAACA 13215 37 100.0 36 ..................................... TCAAAAAGTCCTTACTGGTAACAAATTCCTTAAAGG 13142 37 97.3 36 .......................C............. TCATAAGCTTTCAATAACAGGTTCGACTCCTGTACC 13069 37 97.3 35 .......................C............. TGATAAATTGCGTAAGTAGCTGATTTATTTGCTCG 12997 37 100.0 34 ..................................... ATTTTATCAATTACCCGCGATGAATGCCCCGAAG 12926 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 20 37 98.5 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : AAATATTCTGATTCGTGGCTTACGAGATGAGTTTTTGAGAGCCATCGGCTCTTTATACAAGTTTCCCGTCTCTATGATTGGAAAATACCCCGGTTTAGAGGGGAAATTTACGCCTGATCTTGATGCAAATCAAGAGTCTATCGGGGATGCGCCGATAGAGAATGCCGAACACTCGATTAGTAAGCAGATGAAGCAGGAAGGGAATCGCACCCCCACTCAGCCCGAGAATGGCTCGCAATCCCTTATTTTTTCTTTCGCCCCACCTCAGCCGTGCGAGGATAGCCACGGCAAAAATAAACCAAAAGCCTTACCTGATAAGGCATCTAAGCGAAAGCCTAAAAAATCACGGGGCGCAATCCCCGAAAATCCCGACCAGCTTACGATCTGGGATTTACTAGACTGATTTTTTGGAATGAGCAGAACCTTGAAAACTGAATTTTAGCGAATGGGGCGCAATCCTTACCCGAAACCCTTTTACATCAAGGGCTAAAGGAAGATGG # Right flank : TGGAACTTGAAACCTTCTAGTCTATTAATTTCAAAATAAGAATTGCTGTCAGTGAGTTTATCGAACTGCTTGCGTCCAAAATATCCTATAAATTAGAGGAAGTATAAGCTAATTTGTATTGATAGTAAATCTGTTTTTAATAGTATGAGCAACTCTCAATCGCACGCTAAAAACCTTCTCCCTTGTTCCTTCTCCCCACTTCCCCATACCTATTACCTAGCATTGTTAGTATTCTATAATACCAATGCTTAGGAAACTATAAAGAAAATCCCAAGATTAGGCGAGTCCCTTGGCGAAAAAGGCTATAGTAGCATAAAATCCGTAATTTTATCTACAAAATTGTTATGACAGTTACCAATAGACAAGAGCTAGAAGAACTGATTCAACAGGTGAAAAAAGCTCAACAACAATTTGCCAACTATAGCCAAGAACAAGTAGATCTTATCTTCAAAAAAGCGGCATTAGCAGCCAACAACGCTCGCATTCCCTTGGCTAAAATG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : NA // Array 1 45615-51831 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASZQ01000200.1 Microcystis aeruginosa SPC777 contig000200, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================== ================== 45615 36 100.0 35 .................................... CTGGTTTTTGCTTTTTGGTATTTCTTTTTTGGCTT 45686 36 100.0 40 .................................... TAGATAAAGCGCACGCGACTACGACTATAGTACATAGTTT 45762 36 100.0 34 .................................... TGAAGCTATGGAGATAGCGATAGAGCTAGATTGC 45832 36 100.0 44 .................................... CAATACTTCCGGGTTTAATACCTGTTTCTGGGATAGCGCTCCGA 45912 36 100.0 37 .................................... TCGATCGCGTGGTAAAAATTCGGGGTCAATATCTTCT 45985 36 100.0 42 .................................... AAGCTTTCTCGTAAGCTAAGGCTATTTTCCTCTTCTTCTTCA 46063 36 100.0 39 .................................... ATTCAATATTTGCTGTGGCTTGGGAACCCGAACCATAAC 46138 36 100.0 37 .................................... ACTCTGAGTCCTAATAGGACATAAGCCGTGTTGTTGA 46211 36 100.0 36 .................................... TATAATCTTGCTTCTCGACAATTAATGCCTGGTTCT 46283 36 100.0 38 .................................... TTCTTAATCTATTTTCTGGTTTTTCCTCTACACTTGCA 46357 36 100.0 38 .................................... GAAACAACCGCTACGCCATTAGGAGGAGTATACACATC 46431 36 100.0 36 .................................... CTGAACGGCAATGACTAAAGTATGTACAATCAATTT 46503 36 100.0 36 .................................... CTGAACATTTGTACTGACAACTTTACTGATAACTTT 46575 36 100.0 36 .................................... TATTTTCCTGTTGCAGTAGCCAAATCGAGGATTCTA 46647 36 100.0 38 .................................... GATCAAGTTCTTTAGCCTGCGATCTGGTATTCTTTGAA 46721 36 100.0 36 .................................... TGTTTGCTATAGGTGTTGTAGCTCAGTTCAACCTTA 46793 36 100.0 40 .................................... TTAGCCCATTGCAGAATTAAATCAAGCGATTCAGCTTCGC 46869 36 100.0 38 .................................... ACCGATGTAGTATTAATGATTTCTGTACCTCCAGAATA 46943 36 100.0 37 .................................... TGCCAGTGTTGGGAAATCTTTTTTAGTCATTTATCTG 47016 36 100.0 37 .................................... TCGCAATTGGGAAGTTTACCGTCAGGACTGAAACCAC 47089 36 100.0 35 .................................... CTAACAAAAAATTAACATGGTCAGGTACTTTTAAG 47160 36 100.0 37 .................................... CACTCCCATGCTTGCGGCGTTCAAGAGGAATAACTGT 47233 36 100.0 37 .................................... ACCAAATTTTAGCAACGCATCTCCTAGTTTTGTTGAT 47306 36 100.0 36 .................................... CAACTTTACTGATAACTGATAACTTTAAAACTCTTG 47378 36 100.0 36 .................................... CATTGTTTTACTCCTCATTGATTACAAAAAAATCGT 47450 36 100.0 43 .................................... TTTGTACCCTGCTTTTTCGCAAGCTGTCTTGTAAGGAAGTTGA 47529 36 100.0 40 .................................... AAATTCAAGACAATTTAATCAATGTCGCCACACAATTGCT 47605 36 100.0 37 .................................... TCAAAAAGCTTTTGAGTGTCATAGTCTGCTAAGTAAA 47678 36 100.0 40 .................................... CTGTAAAAATATCCTAATCGATTTGATTTGCTAGGGATTC 47754 36 100.0 40 .................................... CAGGAGCGGGGATAAAATTACTAGGGGCCGGTAATATCAA 47830 36 100.0 37 .................................... AATCTTTCATTAATTCTTCTTGATGTGTCATTGATTT 47903 36 100.0 35 .................................... TAATTAAACTCTCAAAAGTAGAGAGTTTAATTACT 47974 36 100.0 36 .................................... CTATCGAGGAAAGGTGCTTACGCGAATCAATCTTCT 48046 36 100.0 37 .................................... TTGAATATTGAAAAAAACTTGTAACTCACTGTTAATA 48119 36 100.0 36 .................................... TTGATTGACAGATAGTTATTCCACTCTTTTTCCCGC 48191 36 100.0 36 .................................... ATTCGCGAAACAGGACCGGATCGCTACGAGATCGTT 48263 36 100.0 35 .................................... CTGTTAAACAGAAAAAATTGTCTTTGCACTCTCCA 48334 36 100.0 39 .................................... TTTGTAAAAACTCATTATCTCTTGGGGTAAAAATGGGAA 48409 36 100.0 38 .................................... TTGCTTCTATTAAAGAATCTGAAACGTCTTTGCAAGAT 48483 36 100.0 36 .................................... CGGGGTGGCTGTCTAGAGAAACTAAGGACATATCCT 48555 36 100.0 39 .................................... GAGATTAGCTTCGTCACGGGAAAGCCTGCCAGAGGCTAA 48630 36 100.0 37 .................................... ATAACGGGAGAATTTCCCGCATTCGCACATATAGCGG 48703 36 100.0 37 .................................... CTAATAAAAGCCTTCTCCAATTGGGGAAAATTAATTT 48776 36 100.0 39 .................................... TATGAAAAGGCTCTAGACAATTGGCGGTATTACCTTGGG 48851 36 100.0 40 .................................... AGAGTGTTCATGTCGTCCTTGTGTGTTTTGTTTACATCTT 48927 36 100.0 36 .................................... TCCCATTTTAACTCTTGAACTAATTTAGTTAGTTCC 48999 36 100.0 36 .................................... TGTCATGACCAGATATACCAGCGCATCCGATATGCT 49071 36 100.0 34 .................................... TTCTCTTCGCTTAGTTTGACGATTTGGCTCTCAA 49141 36 100.0 36 .................................... TGAGAGAAATAATTGAGATCATAGCAACGCTGTATA 49213 36 100.0 38 .................................... AATAATATCGGGTCGCTTATCCCACTTACTCCACTTAA 49287 36 100.0 40 .................................... GAGGACAATACCCTCAACAACTACCAGATAGAATTCTTCT 49363 36 100.0 40 .................................... CTGGAAGTGCCGAAGCTGGAGCTAAAGGATTAGCTTTTGT 49439 36 100.0 42 .................................... TTCATAAATTCCCCCGCGCTTGAAGTTCTGCAAGCTGTAAAA 49517 36 100.0 35 .................................... TGGCCGATTATAAAAGTAGATGTTTCTGATCTCTC 49588 36 100.0 37 .................................... TTATCCAAAAATTCTTTAGGAATTTTTACGGACAAAT 49661 36 100.0 35 .................................... CCGTTTTCTGTGACCGATGTGGCTCACGAAATCCA 49732 36 100.0 37 .................................... TGGGAAAAATTCAAATCCGCAACGTTTTCGGATTTGA 49805 36 100.0 36 .................................... GAGGATTTTTTGTCCCTAGGTATCTTTCGGCTAAAT 49877 36 100.0 39 .................................... GTGAAACTATCAAATTCAATGGACTATTATCATTGAATA 49952 36 100.0 40 .................................... AATGTTAGCAATCGTTGCGTTAACTTTGGTCATCTTGTCA 50028 36 100.0 36 .................................... GTGGTTCGCACAAAAACCACGGACACTCAGACAGCA 50100 36 100.0 38 .................................... TTAAAAAAGTAAGCAAAACACAAAAAGACAAATCAAAA 50174 36 100.0 35 .................................... TCGTTCCCCCGCCCCCTTTGCCACCCTGCTTTTGT 50245 36 100.0 37 .................................... ATAATTGCGGCGTTTATGGCTTCCACTACTTCGGGAA 50318 36 100.0 40 .................................... AATAAATAAATCCCCCATCTACTGTATCCACAGGGCGAAA 50394 36 100.0 37 .................................... TAAGTGGATCGCTGGCGTACAAGCTGAAATGCTTAAG 50467 36 100.0 37 .................................... CCACTTTTTTCTTTTTTGGATAGTTTAGCAATTGCCA 50540 36 100.0 40 .................................... TTCCTTGGCCCAAATGCCCCGCTGAAAAACTCCCCACCAA 50616 36 100.0 47 .................................... TGTCTGGATTTGAGCATGATCTAAAACTTCGGAAGTTACCACCTTTA 50699 36 100.0 38 .................................... TTCATAGCCTTGAAAAAAAACGAAAGGGCATTTTGCAA 50773 36 100.0 38 .................................... TAACAAAAATCAAGCCTTTTAAGACAAGCTCTTTATCT 50847 36 100.0 37 .................................... AACTACCCCTAATCCTAGCTCTAGGTAATAGTCAGGG 50920 36 100.0 37 .................................... TCTAAAATTGTCGACATTGCCGCCCCAGCAAAAATTT 50993 36 100.0 36 .................................... TTTTTTGTAGCCACCATATTTAAGGTCTCTTTCGCT 51065 36 100.0 38 .................................... AATCAAGCCTTTTAAGACAAGCTCCCCATCTCTATCTA 51139 36 100.0 37 .................................... TTAAGAGAGTTTTTTAAGTAAATAGGACAAATAGATT 51212 36 100.0 37 .................................... TTGCTGATTTCCTGCCTTAGTATCGGGTAATTGATGA 51285 36 100.0 35 .................................... GTGGCAATCATTTTGCCAGCTTGTTGATAGATCAC 51356 36 100.0 41 .................................... TACTCAAGAATGTACTCAACCAATTCATTAACTTTATCTTG 51433 36 100.0 36 .................................... ACGACGACTGGCAAGCGAATACGACTCGCGATCTTG 51505 36 100.0 40 .................................... TGAAAGCGTCCGACTTCCTTTTTAACTAATCCCGTTAGTT 51581 36 100.0 35 .................................... GGGCTTTTTCTGTCCTACAAAAGGGTTGTAATTGT 51652 36 100.0 35 .................................... TTCTACTTTTAAGATTTTTTCAATTAGTTTACGCT 51723 36 100.0 37 .................................... GAGTTAATCTAGCGTTTAATCGGTTTAATCTAGATTT 51796 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================================== ================== 85 36 100.0 38 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Left flank : GTTTTCAATACCTACCTACTTAATCATGTTATTTTATGTCATCGCCTATGATATTCCCTGCAATAAAAGACGTAAAAAAGTGGCTGATTTACTAGAAGGATACGGCCAACGGGTTCAGTATTCAGTTTTCGAGTGTGTTTTAAGCAAATCTCTATACAATCAGTTAAGAGAACGCCTGCAAAAGCAAATCAAAGAAAACGAGGATAGTATTCGATTTTACCCCATCTCTGGCCATACTTTAGCACAAATAGAGACTTTAGGCGGTGTCCCGCTAACTAAAGCGCCAAGTTCTACGATCATCTGATTCGGTATCATCGACTAGCGACGGATAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACAGGATAAGGGTTTTGTGGTTTATGGGGTTGACTGTGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCCGAACCCCAATCCTGTTCGGACGTTTGCCTACCGGCT # Right flank : CCCGCTTTAAATTTTGGATTGAAATTTTGTGTTTATCTCTCTACTTGCGCTTAGACATTAGCTGAATCTCCCCCAATCCCTTTCCTGTTGACTCTTGCAAAAGTGCCTCATTTCAATAGGCAATTTAAATGCGCGGGCAGCTTATTCTATATGGTAATGTTTAATTATATTCCCACAAAAGTTGCTTATGTCCTTACCTGAACTCCCTCTTCATCTTCAATTAACCCAAATGGTTTCGGGTTACTGGCTATCTCAGGCCATCTATGCTGCGGCTAAATTAAGTCTAGCCGAGCATTTAAGCAAAGGAACGAAATCCTGTCAAGATTTGGCCTCCCTAACTGAGACTAACCCTGCTGCTTTATACCGACTGATGCGAGCATTAGCTAGTGTAGGAATTTTTCAAGAAACTGAATCTCAACAGTTTATACTAACTCCCTTAGCCGAACATTTATCTAGTGACCATCCCCGGTCAGTAAAAGCGACAGCGATTATGTTAGGAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 27545-28241 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASZQ01000277.1 Microcystis aeruginosa SPC777 contig000277, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 27545 36 100.0 39 .................................... TGAGTCAACATACGATTCCGTGGATAAAATGACTCTAAC 27620 36 100.0 40 .................................... TCCCCGCCCAAAGTTTTACAGTCATCAGCGACACCACCCT 27696 36 100.0 34 .................................... GGCAAAAGTCACTCGCTGAAAACACTGCCCTGCG 27766 36 100.0 36 .................................... TGATTTCCTGGGTAATCTTCGATAAGAATGATTTCG 27838 36 100.0 36 .................................... GACTGTGGGAGGCTGTGATAAATAGCCTTTCATAAA 27910 36 100.0 36 .................................... CATAATAGGCGTCACAATAGCAGGAATAGCCTGCTT 27982 36 100.0 38 .................................... AGCAATTTGATTTTAGTTTTAAAGGGGTCGGACGAGTT 28056 36 100.0 42 .................................... AGGCAGTCCATTCATTACAATGGTAGTTGATTGTAAAACTAA 28134 36 100.0 36 .................................... ACTGTCCGGCATCGAGCCAACGCTCTCCCCTCAGGA 28206 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 10 36 100.0 39 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : ATTAGAAAAAGGGTTTCTAATTAAAGAGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGGGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGGGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGTAGGATGGGTTAGCGGTAGCGTAACATAATCGGGCGTTGGGTTTCATGCTTCAACCCAACCTACGTTCATTTTATATTTAATTCCACCCACCTACTTATAGATATTTCGACAAAATTGAAAGGCAGAAAAAGGGTTTATAAAGAAACCCTTTTTCTA # Right flank : GAGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAAATCGACGCATCTCCAAAAAGGTGGTATTGAGGGGGGTAAAAGTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACACATCTAACCAGAGAATCGGGGTTTTAGGTCGGGGAGGGGGTGCATCGATTTTCAGTCAAGAGTTAGGGGACAAGCTAGATGATGTAGAGATTTGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAACAATCTAGAGACAGCTTCTTCGGAAATCCCATAGAAGCGCACATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTCGATGTGTAATTAATTTTGCTTAAGTAATTATCTGTAATTAAGTAGCTGGTTATAATTAAATTAAAAATGGATTTTAGGTTCGATCCCCCCTGCCCCCCTTGATAAGGGGGGTGCCGATAGGCGGGGGGATCTGACAACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //