Array 1 48128-48828 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMMU01000069.1 Lysinibacillus sphaericus strain 1987 827, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 48128 33 100.0 34 ................................. TAGGACAAGAACATGCAGCCATAAATTGGACTAT 48195 33 100.0 34 ................................. TGTAAATTTGACGCCACCGTTAACAACGTATCAA 48262 33 100.0 33 ................................. CCCTACACCTCGCAGTGATCCAATGATCTTAAT 48328 33 100.0 34 ................................. ATTTGAAGGTACTTTAGATAGCGAATTATTAGAT 48395 33 100.0 34 ................................. TTGTCTACGCTATCACTGAATTTGATATTTGCGG 48462 33 100.0 34 ................................. GATGAGTTTAAGATTGAAATTAAAAATAGTGGTA 48529 33 100.0 33 ................................. CACTAGTTCAACTGGAACGTGATGTAAGGCAGC 48595 33 100.0 34 ................................. CTCCTGGTATTGAGTAATTTCGAGCCATTAGAGC 48662 33 100.0 35 ................................. CCAAAAACAGTTTCCAACACAGTACCCATCAGCTT 48730 33 100.0 33 ................................. CCATCTCCCACGCCTAACTTCGCAAAATTTACT 48796 33 97.0 0 .......................A......... | ========== ====== ====== ====== ================================= =================================== ================== 11 33 99.7 34 GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT # Left flank : ATGCAGAAGGACATGGCGACAGCCATGAACACGAAGCATCAGCCTCGGATGAAGCGACGCTACAATATGTGCAAATTAGCACTGCACAAGTGGCAAAAGAGGACGCCAAAGAAGTACAGTCATCGAATGCAACAACAAAAGAACAACAAACAGCAGCAACAGATGACACAACATCCAACACAGTATGGATGATTGCCATCCTAATTGTCCTAGCAGCTATTTTCGCGCTTGTTTTCGTGAAGAGAAAAAAATAAAGCAACTTATAGGAACCAGCAATAATCGAGTAACTTCGGTGATTGCTGGTTTTTTTAAAAGGAAATGATTGCTATAATAAAGTAAAGTGCGAATAGTAAGCGAACATGATTTCATAGCATGATTCGCACCAGTAATATTGAAGAAATTGCTAGTTAGATAGATAAGTATGGGTTATTAATACCTGTTTTTTTATTTATAAATATTAATATATAGGATATTTTGTTGAGAATCTATTTAATTTTGCT # Right flank : TACTAATGTGGTTGCTGCTTTTACTAAGGCTTTTGAGTCACTCTCTACAGCTATGAATTGAAATTAAATGGTGGGTTTTTTTAATCATCAGCATTTCTTATGTATGTAGAAAAAAGATTAACCGTATTTTTTATAGGTACTTAGACATCTAATCTAAGGTTTGGTATAATTGTTCAAATATTACAATTTTATATACGTGAGAAAGGTGGGTTAGATGACTACTTTAGATATTATTGCTCATATTCGATCGAGTGATGGTGCAGAGCAACGGTTGGTGGATCATTTAAAAGAGGTTCAAGTTTTGACAGAAAGAATTGGACAGAAAATTGGTCTTTCACATGTCACTGGCCTTGCAGGAATGTTACATGATATGGGGAAGTTTAGCGAAGCGTTTCAGGAATATATTCGCGAAGCTTTCTCTAATCCCAATAATCCTCCAAAAAGAGGGAGTGTGGATCATTCTACAGCAGGAGGGAAATTTTTACTGGAGCATTTTCATC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 57273-58310 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMMU01000069.1 Lysinibacillus sphaericus strain 1987 827, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 57273 33 100.0 33 ................................. ACGAAAATGGTGAAGAAGAAGTATTAATTGAGG 57339 33 100.0 33 ................................. TCAATATGCTTTAGATGCCTTTAATTTACATGC 57405 33 100.0 34 ................................. ACTGACAATGCAGTAGGAGCAACCGCAAAATACA 57472 33 100.0 34 ................................. ACGCCACCAGTGGGCTAAAAGAGTCATTACAAAT 57539 33 100.0 34 ................................. TATTTTTTCTGTTGCGGATCGAATTGTTGATTTG 57606 33 100.0 34 ................................. ACAATAATAAACGTGGAATATAGAAACTGAAATG 57673 33 100.0 35 ................................. ATATACGGTGTTGGTGATGGCACAACGGAAAAAAT 57741 33 100.0 34 ................................. ATTAAATTTGTAGCTGAATAGTGCTGGTTTTTGG 57808 33 100.0 34 ................................. AAGAAGTACAAGAGTGGCAATTTGAACGTGATGG 57875 33 100.0 34 ................................. GTGACGGTTCGGCTACAACAGATCAAATGAATAG 57942 33 100.0 33 ................................. GACACTTTCATGAATAACACCCCCTACAACCTC 58008 33 100.0 34 ................................. ATTTGGTATCCTGACTGTTTATAGTTTGTTTACT 58075 33 100.0 37 ................................. AGTTGGTAGTGGTGGAGCTAATGATGGAGGTAGTGGA 58145 33 100.0 33 ................................. CAACCAGTCAGCGAAAGTACCCAATTAGCTAAG 58211 33 100.0 34 ................................. ATTAGGTTTTATGGTCAGTTTAGTTGTGAAAAAC 58278 33 90.9 0 ..............A......A..T........ | ========== ====== ====== ====== ================================= ===================================== ================== 16 33 99.4 34 GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT # Left flank : GAAGAATATCCACCCTTTCTATGGAAGTGAGGTTTGGTTATGCTAGTATTAGTAACGTACGATGTGGTCACAAAAACGGCTGCTGGTCAAAAACGATTACGCAAAGTAGCAAAAACTTGTGAAAATTATGGCCTCCGTGTTCAAAATTCCGTTTTTGAATGCGTAGTAGACGCAACACAATTTAAGCAACTTCAACTGGAACTTCAGGCAATTATTGATGTAGATTTGGATAGCCTACGCTTTTATCAGCTTGGCAACAACTATAAATCAAAAGTCAAGCACATTGGTGCCAAAGAAACGTTTAATGTGGAGGACACCATAATTTTATAAATATCACCTCGGCGCGGATGCAAAGCAAACATAAAATTCCTAGAGGATCCGCACCTATTTTTAGTAAGAGCTTAATCAAAATTACAATCTTGATGAGTATAAAGAAAGGTCATATATAAATGAATTAGTGAAATTATATTAAAAGTGATAATTTTTAATGAAATTTTGCA # Right flank : TCCCGCTAGTCCCTCTATCACAGTAATACGTTCTGTCATTCTCGATACAACTAAATAGCCATTACAAATAAAATAAAAAGATGAACAGCACTTGGTAAGGTCAGTTGACCAACAATCGCTGTTCATTTTTTATTACCGAAAATCATGGACATTCATGAAAATGTCAAAATTTTTACGTGAACGGATGCAAATTGCAGTAATTTTACACAAAATTGAATAACCACAAGCCTGTTCGGTATATAAATAGGATACGATTATTTTTAGGCTGAGGAGTGTGTAAATGGCAACGCTTGTAGTAAAGAGAAGTATTATGCATCGGTACCAAAGCATTGGGCAGGCAATTGAAGAGGCTATGCCTGGGGATATGATTGAAATTCGGGATGGTATTTATGAGGAGAGCTTGGATATTTCGAAGCGGCTCACCTTGTATGGAGTTGGCAATGTCACAATTAAAGGTGGCGTTTTTATTCGCTACCAGACCCTTGTAGATATGCGCAATT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //