Array 1 22197-21864 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXJE010000078.1 Streptomyces sp. DEF147AK ISO100977_scaffold77, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 22196 28 92.9 33 A...C....................... GGCGCTGATGGGCGCTCCCGAGCCCGTCCTTGT 22135 28 96.4 33 ...........A................ GGGGGAGGGCAACCCCCCGAGCGGCACCCCGGC 22074 28 100.0 33 ............................ GCAGGTCAGGGGCTGGCTGGACGATCCGGACAC 22013 28 100.0 33 ............................ GCCTCACGGCCACCGCTCGGCTTCACGATGCGC 21952 28 100.0 33 ............................ GGCGACGGTGAAGGCGAAGCGCCCCACCCAGCG 21891 28 89.3 0 ....................C...GC.. | ========== ====== ====== ====== ============================ ================================= ================== 6 28 96.4 33 GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Left flank : TGGGAGGGTGCGGTGATGGGCAAAGGGATGGCAAAGGCCGTCCGAAGGTGCAGGTGGGGGAG # Right flank : CCGCCAAACCTGACAGGTGTTCCCCCACCCAACTCCCCGGCCGAACCGGACGACACCCATGTCACTGAATCGCAAGCGCCCCGGAGCCCGCAAAGGCAACACACCCACCCCGCCCCGCCCTGCTCGCGCGTCAGCCTCACCAAGGGCACCCCCGCGTCGCCGACCAAAACACCCCCGCCAGAACACCCCTAGAACCGGACAAAACGCCCCCACCAACAGCAGCCACGCCAACCACCCTCAACATCACGAACACACGATGGACACAAAATCGCCACAGGCGGAGCATCCGGCACTCGCGTCATACCTCGCAGCCCCACACTGAGCGGACGCATCCGCATTCAGGGGGAATCATGAGACGCCAACTCGCCATCGCCGCAGCATCCTTCACCGCTGTACTCGGCCTCGCCGCCTGCGACACGGAGGTCACCTCCTCCCCCGACAAGCCCGCGGCCGCCGACGACGCGAAGCCCGGCAAGGAAGCCGACAAGGCCGAACAGGCT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.60,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 310-98 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXJE010000119.1 Streptomyces sp. DEF147AK ISO100977_scaffold118, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 309 29 100.0 32 ............................. GTGGCCAGTTTGATCTGTGCGCTTGCTCGGAG 248 29 100.0 32 ............................. ACGGTCAACGGCTACGCCGCCGACTGGAAACA 187 29 96.6 32 ..............T.............. GGGTCGTCGCCCTTGTCCGCCGCAAACACCAC 126 29 75.9 0 T........T...GT.......C.AC... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 93.1 32 GTGGTCCCCGCGCAGGCGGGGGTGGTCCC # Left flank : TATGAGCGGGTGCGGGGGTGGTTCGGGTGAGGAGGCTGTGTGGGGGCGTGGGGTGGGCTTCAATGGAGAGGGGCTGGCGTTTGCGAAGCTGAGGGATTTTATGGGCTGTTCGCGCGGAATGCCGGAGTTTCTAAAGTTGGCGCGGGTCGGGGGTAGGGCGGGGTAAGCCCGCAGGTCGGAGAG # Right flank : CTGCTCTGTGATCACGGCGAGCAGCAGGGTCAAGCGGGTGCCCACACATGCAGGCCTCACCCACGCCGACCCCGACCCAGTCGCCGTACTCCGCCCCC # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCAGGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 123755-123604 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXJE010000009.1 Streptomyces sp. DEF147AK ISO100977_scaffold9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 123754 29 96.6 32 ............................G GCGCTGTCCGAGGCGGAGCGGGCGCGGCTGCT 123693 29 100.0 32 ............................. GCCGATGATCTCGCCGCGGATCGTCATCCGCC 123632 29 82.8 0 ..............G......CAA.C... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 93.1 32 GTGGTCCCCGCGCACGCGGGGGTGGTCCC # Left flank : AGCACCACACCCCGCAGCCCGCTACGCCACCGGCAAAGTCCGATACCAGGCGAACTGCTCGTGAGTGGGCATCCAGTGCTGGCCGCACCTGGAGCAGTACCAGCGCCAGTTGTCGGGGTCGTTGCGGAGGTAGGTCGTGTCCTTCCAGAGCCGGCCATGGATGTCCGTGTGGCAGGCCCGGTCAGGACAGGGCGGGGGAACGGGCGTGGTGCGCGGGCGAGTTGTGGTCAGCATGGGCGCCTCCGTGACTCGATGGGGTCAGGAGGGTGAAACGAGGGGGCTCGGGGCTGGGTGTGGGGCCGGGGCGAGGTGCGTTCGTTCGCGTGATGAATGGGGGATGAGGTGCGTGGGGGGGGCCGGGGTCTGCTCCGCCGCCTCGGTCCGCTGCGTAGGATCTAGCGAGAACTCACGGCGAGGTGGGCATTTTGGGGCGAATATCGCTATCGGCGAAGCTTGCAGAAACTGGGGCAGAGGCGCCGTAAAGCCGCTGGTCAGGGAGG # Right flank : ACCCCGCCTCACCCCGACCCGGCCCCAAGCGCCGCCACCCGCCTTGCTCCCCCCACCCCCACCTCCTACCATGAATGCGCTTTCACAACGCGTGAGGCGGGTCGGTGGGCTCGGGTTCTGGATGGTCGGAGCGGGCGGGACGGGATGAGGGTAGGGGCGCGTGGGTGACGGGGTGGCGGGGACGCCGACGGTGTATGACGTGGCCGGGCGGGCAGGGGTGTCGATCGCGACCGTGTCGCGGGTGTACCGGAGTCCGGAGTCGGTGCGGGAGGCTACGCGGGAGAAGGTGCTCGTGGCCGCGCGGGAGCTGGGGTACGTGCCCAGTGGGAGTGCGCGCGGGCTGGCGAGCCGGTCGACGGGGGTGCTGGGGCTCTGCTTCCCCGACTACTCCGACCCGGACGCCGAGAGCGAGGCGGCCACGGTGGACGCCGACGACGACCACGCGTTCATGCTCTACTCCGACCAGATCATCCGGGGTATGGAGCGGGCCGCGCGACGGC # Questionable array : NO Score: 3.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 38556-38707 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXJE010000015.1 Streptomyces sp. DEF147AK ISO100977_scaffold15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 38556 29 100.0 33 ............................. CCGTGCGGCCCTTGATGTCCGGAAATCCGGACA 38618 29 100.0 32 ............................. GTGCTGCGGGGGGCCACCGTCACCTGGGGCGA 38679 29 72.4 0 ............CCC......CAAC..A. | ========== ====== ====== ====== ============================= ================================= ================== 3 29 90.8 33 GTGCTCCCCGCGTGTGCGGGGGTGATCCC # Left flank : CCGGCACCCACCCCCGCGTCGTCCCCGCCCACCACAGAACCCCTCCCCGTAGCCCGGTCTGCCGCTGCGGGTCACCTTAGGGGACGGGGGGTTGGGCGTCTTGGGGGTGAGGGGGTGGGGGTGGCGTGGGCGGCTGGTACGGGGGGGGGGCTTCGGGGGGTGTGGGCGGGGGGTGTTCGGGTGCGTTCGGGTGGGGCGCCGAGTGGTTCGGGGGAGGAGGGGGCGTGGTGGGGCTGGAGTTGACGCGGGGTGTTGTCCTGTTCCGATCGGCAGGAGCCACCGCGCAAGCCTGGTCGGTAGTTGGGGGTTGGGTTCACTTGGGTGCGACGTTGCTGGGGTTGCGCTTGAGAAGGCGGAGTCAGGTGGGAGGAACTGGGGGAGGTTGGACGGGGCTGATGGATCGAGAGGAGGGCGTTATGCGGCTTTCGCGCCAAAGGCCGGAATCGGCGAAGCTTGCAGGAACGGGTGATGGCGCCGGGTAAAGGTGCAGGTCATGGAGA # Right flank : CCCGGCTTCCCTCAGCTCTGCCCACGCCCCCTCACGGCTTGCAAACCCCACCCTCCGCAGCAGCCCCCTCCGCGCCCGCGAAAAACCCCACAACCCGCCCCGCACACCCCCCACCAGCCATCCCTCCATGCTCCCCGTCCCCCACCACCAACAACGTCCCCCCAGTCCGCGCCCGCATCGCCCGGGCCCAGGGCAACGGCGTGATCACCTCGTCCCTGTGGGCGACCAGCAGCAAAGGCCCGCCCGCGCGGCCCGGTTCCACAGGCGGCCGCTCCGGAGCCGGCAGGCCCGCGCAGGTGCTGGTCCCCGGGACCTCGCCGCTGCCCGGGAACATCGGGCGGGTCGCGCCCAGTACCGGGTAGGCGGTGCGGCGTTCGCCGTAGGCCGACCACTGTTCGGCGAACGAGGCGGCGTGGGTCACCTGGGAGCAGAGCAGTGCGGTGCCTGCGAAAGGGGCGACCAGGGGCGGTGCGGCGGTGCGGGGTTTGCCGTCGCCGTCC # Questionable array : NO Score: 4.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGGTGATCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.20,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 58930-58779 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXJE010000004.1 Streptomyces sp. DEF147AK ISO100977_scaffold4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================== ================== 58929 24 100.0 39 ........................ TCTTTGACCGGCAGGTCACATCGGACCGGCGCACAACCC 58866 24 100.0 40 ........................ TCCTTGACCGCGAGGTCGGCACAGACCAGCACCCCTCGAT 58802 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ======================================== ================== 3 24 100.0 40 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : GGAACCTCTCCGCCTCCATCGGCGACCCCGGCGTCCTGCGGGCCGTCATCGGCGCCGCCCTCTACATGACCCTCATGGCCGTCTTCTCCATGGGCGTCGCCGCGATGCTCCGCTCCCCCATGCTCTCCCTCGGCATCCTCGTCCCCTTCTTCTTCCTCGTCTCCTCCATCCTCGGTGCCGTCTCCGCCACCGAGAAGATCGGCCGCTTCCTCCCCGACCAGGCCGGCTCGAAGATCATGCAGGTGGTGGCGCCGCTGAACGACGACACCCCCTACGGCCCCTGGGGCGGCCTCGGCATCATGGCCCTCTGGGTGATCGCCTCCCTGGCCATCGGGTACGCCCTACTCCGCCACCGCGACGCCTAGCCAGACGGAACCTGGCCATCGACCGGGCGGCCTCAAACGCCGGCCAGGCTTGAGTGGCCTCAAACGCCGGCCAGGCTTGAGTGGCCTCAAACGCCGGCCAGGCTCAGTGGCCTCAATCGCCGGCCGGGCTACCGA # Right flank : ACCCCCCGGCCCACCCCGGGAGGGAACTTCCGCTTGGCCGGAACCGAACGCCGGTGACTATCCTCCTTACGTTGACGGGGACAACCCCGGCAAGGAACTCTGTCGACGGGTGCGGGGAGCACATGATCGAGGCCACCGGCCTGACGAAGCGCTACGGCGCGAAGACCGCCGTGCACGACCTCTCCTTCCAGGTGAGGCCCGGCACGGTGACGGGCTTCCTGGGCCCGAACGGCTCGGGAAAGTCCACGACGATGCGCATGATCGTCGGCCTGGACGAGCCCACCAGCGGCCATGTCACGATCGGCGGCCTCCCCTACCGCCGCGTCCCGAACGCCCCGCGCCAGGTCGGCGCCCTGCTCGACGCCAAGGCGGTGCACGGCGGCCGCTCGGCCCGCAACCACCTGCTCTGCCTCGCGCAGCTCTCCGGCATCCCGGCCCGCCGGGTGGACGAGGTGCTGGGCGTGGTGGGGCTCCAGGACGTGGCGCGCCACCGCTCGAAG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.20,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 93237-93389 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXJE010000006.1 Streptomyces sp. DEF147AK ISO100977_scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 93237 24 100.0 41 ........................ TCTTGAACGGACGAGTCCGATCCGGACCTCGGCCCACAACC 93302 24 100.0 40 ........................ TCCTGAACCGTCAGGTTCCCCCGGGCCCAAGCCCAAAGAT 93366 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ========================================= ================== 3 24 100.0 41 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : CCCGGGCCGCAGGGCATCCAGCGCCGCCGGAGCGGGCGGCGCACCCCTGGGCCCCCGCACCAGCCACTCGTTCCACAACGCACCCCCGGGCGCCACCACCGCCTCGAACCGCAACGCGGGCCAGAGCACCACCGGCCACCGCAACGCCTCACACTCCAGATCCCCCACGACCCGCCGCTCCACGGCCTCCGGCACCCCCAGCACCGACCGCAACAACCCGGCCCCCCGCCGCCCCCTGGGTGACCGCACCATCGCCTGCCACCGCCGGTTCGCCTCCCGCATCGCACCGGCGTCCACCCCCAGCTCCCGCCGCGCCTCCTCCACCATCTCCGCCTGAAAATCAGCCATCCGCCGCAACAACACCAACTGAAACTCAAGCGACCCGAACGAACTGGTCCCACCGACAGCAGCGCACATCCCCCCATTGTCCGCAGCCCCCACCCCACCGCGAAAAACAGCGGGCACGACCGCCGAGAGGCAACTGGCCGACCGCCGAAAAA # Right flank : ACCCCACCGCACCCCCGCCGGGGAGGGAAGACTCACTCCCCGGCCATCCTCCGCAACATCCCCCGGAGGACCTCCCGCTCCTCCCGGGAAAACCCGGCAAGCGGCTCCCGAGCAAAATCAAGGGAGTCCCGCAGCACCCGCGCGACCTCAAGCCCCTCCGCGGTCAGAGCGGCCACCTTGATCCGCCGGTCCCCGGGATCGGCCTGCCGCTCGACCAGCCCCCGCAGGGCGAGCCGGTCCACGATCCCGGTGACGTTCGACGGCTCGCACTTGAGCCGCCGGGCGATCTGCCGCATGGGCATCGCCTCGAGGGACAGCAGACCCAGTACACGCGCCTGCGCGCCGGTGAGTGCCTGCTCGGCGGCGGCCCGGTCGTACTCCTCGTGGTACCGCGCCACGACGGCGCCGATCAGCTCGACGACTTCGAGGGTCAAGGGGTCCGTGCGGGTGGCCATGGGTCCCAGGATAGCCGGTTGCTTGACAACATGAAATATTCAGAC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //