Array 1 98955-99166 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FOGP01000001.1 Parafannyhessea umbonata strain KHGC19, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     98955	    29	 100.0	    32	.............................	GGCATTACCACGGCGCGCGGCCTTCCCGCCGA	
     99016	    29	  96.6	    32	....................A........	AATCGGCGACGCTATCCGTTTTTCAAGGTCCA	
     99077	    29	  96.6	    32	.............T...............	GGCCGCGCCAAAGAGCATGCGCACAACAAGCG	
     99138	    29	  89.7	     0	.........................GT.A	|                               	
==========	======	======	======	=============================	================================	==================
         4	    29	  95.7	    32	GTGCTCCCCGCACATGCGGGGATGATCCC	                                	       

# Left flank :   NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCACATGCGGGGATGATCCCACCGATGTGCGCAACCTTGCCGCTGCCTTTAA
# Right flank :  ACCACCCCGACCCGAACGACCCGGATATGGTCGACTCGCAGGGGGACGGGCAGTTCCCGGAGGGTATGTTCCGGTTCGAGAAGCAGATACGGTAGGGCGCGGGGCTAGAGCTCTTTCGCGGACTTGCCGTTGTTGCAGTCGTGGCAGAGGGTCCAGAGGTTCTCGGGCACGGTGAGGCCGCCAGCTGCGACGGGCACCTTGTGGTCGACCTCGAGCCTGGCGCCCTCGGCGGCGGTGCGCCCGCAGATCTGGCAGCGGTAGCCGTCGCGCTTGAGGATGTCGAAGCGCAGGCTCGGCGTCATGAGCGCGCGCTGGTGCTCGCGCGATGCCTCGTGGCGGGCGCGCTCCTCGCTTTCGACGAGGGCCTCGTAGACGTCCTGCGCGCCGAAGACGCGGTTGGCGATGTAGCGGTTACGCCCCTTGGGGGAGACGTAGGACCAGGCCCAGGTGATGTGCACGAGTTCGGCCTCGCGCAGTTGGCTGGTGGCCTGCTCATGCGG

# Questionable array : NO	 Score: 3.84
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCACATGCGGGGATGATCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [4,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTGCTCCCCGCACACGCGGGGATGGTCCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-9.00,-9.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [1-1] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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