Array 1 26974-25355 **** Predicted by CRISPRDetect 2.4 *** >NZ_CMZL01000029.1 Neisseria meningitidis strain NM2193, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26973 36 94.4 30 ........G...A....................... TCCTGCCAATTATCATACATAAGATTTTGT 26907 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 26841 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 26775 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 26709 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 26643 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 26577 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 26511 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAT 26445 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 26379 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 26313 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 26247 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 26181 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 26116 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 26050 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 25984 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 25918 36 100.0 30 .................................... TCCCGACATTGACGGAAAAACCCGAAAGCA 25852 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 25786 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 25720 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 25654 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 25588 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 25522 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 25456 36 100.0 30 .................................... TTATGCCGTTTTCATCCGGCTTGAACATTT 25390 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.8 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCT # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //