Array 1 1979053-1981196 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036426.1 Tautonia plasticadhaerens strain ElP chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================================================================================================== ================== 1979053 34 74.3 48 .AT.....A..C.....AAC........-...G.. ACGACACCGTTGGCCTAGTCATACGAGTTCGTGTTGTTGAAATAGTTC 1979135 35 68.6 40 .TC.......CCG.ACCGT.A.............. ACGATTTGCATGTGCTTGTTGAGCAGGAAGTCCTCGACAT 1979213 35 100.0 44 ................................... TGGCCGTAGATCTTCGGCGGCAGGCCGTAAGTATCGATCTGGCC 1979292 35 100.0 42 ................................... GGCAGACCCATGATCCACTTCCGCCGCTGAACGTAGCCCCGC 1979369 35 97.1 44 .A................................. GACTCTACAGCGATTGGAAAGTGACATACCAGTTGCATCTCCCC 1979448 35 94.3 43 ........T..C....................... AAGACGTGGACCTTGTCGCCATCCGTCCCGGTGAAGTCGATCT 1979526 35 94.3 45 ...........C.G..................... TTGAGGCCGAAGATGATGTTGTCGTCATCCGTTTTGGCCTCGGCT 1979606 34 88.6 47 .G...-...T.C....................... TCGGTTTGGATCAAGCAAAGTATCTCGGGTACGTTGCGGACCTTGTC 1979687 35 88.6 46 .......G...C.......CT.............. GCAATCCAGGTGATCGCTTGCAGTTGGTGCGGCATGATGCCGATCT 1979768 35 91.4 46 ........T..C......................T GCAGACCAGGATGAGCAGTCTGCCGGGGCACAGCTTCAACTGCGGC 1979849 35 82.9 43 .T...C.....C....T..C..T............ CTCAGATTGAAGGTGTCGTACCCCGTCTGGTAGAAGACCAACT 1979927 34 91.4 44 .........-.C....T.................. GTGACCCGGCCATTCTTCGGGTGCTCGTTGGCGGCGGTCGACCC 1980005 34 82.9 43 .T.T-......C........T...A.......... CAGTTCGTGTGGATGAACTTGGCGATCGTCCACTTGTTCGGGC 1980082 35 91.4 40 .T.........C......T................ AAGCGACCGTCTCTCCACTGGTGTGTGTATCCAGTCGACT 1980157 35 94.3 42 ...........GA...................... ATGGGATAGTTGTCGTACACCCACGGCTTGACCCGAACCTCC 1980234 35 88.6 116 ...A.C...A.C....................... CGGACGGTGAGTACCGCTTTCATGGTCTCGTTGTGCTCGATCCGACAACACACAACCTCCAAGGGGATTGAACCGTAGACCTTCAAGTTCCTCCCGTCGGAATCGACACAGGTGTC 1980385 34 82.9 41 ...T..G....-.T............A....G... GAGTCAACGAATCTGTGCATGAGCTTATCCTTTCGGTTCTA 1980460 35 80.0 43 T...T.TT...C..................A...G CCTTGGTCCGCTTGCAGCGGTTCCAGCCGGTGATGGCATTGCC 1980538 35 88.6 45 ..G...T....C.........C............. ACCTTCCGAGTGCGTGCCTTCCGGAACACACCGTCCTTGCCCACC 1980618 35 85.7 41 ....C......G..T....G.............T. ATCTTGGACAGCCCGGCCCGCTGCTCCTGCTCGGCCTTCCC 1980694 35 88.6 43 .....G.TA..C....................... ACGTGGTCCTCGACGCCGCAGGAGAGGCACGACACGATGGTCG 1980772 34 94.3 41 ...-.......C....................... TCCCAAATGTTTCCATTCATGCAGATCGCACGAAACAACCT 1980847 35 85.7 44 CT..AC.....C....................... TCAGCCTGGTAGATGAGTTCATTCGCGTGCCAGCAGTTCAGCCT 1980926 35 91.4 43 ...........C.........AT............ CAATAGGCATGGCCATTGATGGTCACCGGGCCCGATTCGCCCT 1981004 35 85.7 44 ....TCT.T..C....................... CCGTAGTACCAGCCGCTCCTGTAGAGCCAGGAGTCGTTGCATCT 1981083 35 85.7 44 .........A.C....T........C........T TCCGGGAGGCTGATCTGCAAGGCGACAGTGTTCCAGATGATGCC 1981162 35 74.3 0 .....C..T..C.....AT...........TCGC. | ========== ====== ====== ====== =================================== ==================================================================================================================== ================== 27 35 87.8 46 GCACGACCCCGACCCGATCACGAGGGGATTGAAAC # Left flank : GTCCGGTCGTGTCGTACGGTCTATTGCAACCCAGACCTGCCCCGCCCCCTGATGTTCCGGCTCAGGGGCGAGGAGGTCCAGGGGACCTGGTCCGACGGCTCCGATGCGGTCACCTTCGCGGTCCAGTCGTCGGCGACGACCGACGGCCAGCGTGAGGCCGTTGTCGCGATCCTCAACGACTGGCTCCAGGCACGCCGGTAGCTCGATTGCTCCGAGGCAATGGCTTCTACTTACGTTGCCTGTCCCGTATCTCGAAGCTATGCTCCGTAGACGCTGTCAGGAATGTTCGTCGCCCCGCCATCTTGCGCCAGGACCATCTACGCTCTGGGTAGCTACGAGCGAACTGATGTGCGCAAGAATGATTGCATTCATGCAAGGGCCTGCCGCCACCGGATGACAGAGCGAATGAAGGACCTCGGCTGCCGCGTGCGGTAAATTGTTTTGGGGAAGTTCCTCGACCGTCGGCTCTTTGACAATTCGCTCGCGAAATCGACGGTCCT # Right flank : CGATGGACCTATCATCTGACACAGCAGTTTTACGTGACCTGAACGTCCGTGCCTGGCGGCTGCACCTGGCAACGCCGGGGGTCCTCGCCACGGTGCCCCTCTTGCGCGGCGTCTGGGGGGCAGCACTGCGGGACGGGTCGCAGGGGCAGTATCGCGAGGTCTTCGAGGGCGGCGAGGCGGGCGTGCCCCGCTACCTGATGCGACCGGCCCCTCACGAGGCCGAGCCGGCACCGGCCGTGGAGTTTCTCATCTTCGGCCGGTCGGACCCGGACGCCGAAGCGGCCCTGTGGGCGGCGTGGGACGAGGCCGAGAGGCGGGGCCTTGGCCCCGAGCGGCGGCCGTTCCGCATCACGGCGGCCGTCCCCCTGGCCTGGGACGAAACCCCGCTGGGGCCGGCGCGGGTGCAGCCGGGGTTCGCCCTGGCCCCGCTGCCCTGGCCGGCCGGGAGCATCGCCGCAGGCAGCCAGATCGACATTCCGGCCCCCTTGCGTCTGCTCCGT # Questionable array : NO Score: 4.50 # Score Detail : 1:0, 2:0, 3:3, 4:0.39, 5:0, 6:0.25, 7:-0.26, 8:1, 9:0.12, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCACGACCCCGACCCGATCACGAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [33-49] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //