Array 1 7794-7600 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGNS01000023.1 Neiella marina strain J221 contig23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================= ================== 7793 27 92.6 33 .....T..................A.. GGTCTGGATGAACCACAAATGGATCGGTTGACC 7733 27 100.0 33 ........................... AATATGAGTGATCCCCACGAGTCGGTCATTGGC 7673 27 88.9 20 ..T.................T...A.. TAGGTCAGGAAGAAAGCAAC Deletion [7627] 7626 27 70.4 0 C.A......T.A.C.A....AA..... | ========== ====== ====== ====== =========================== ================================= ================== 4 27 88.0 29 GTGACCTGCCGCATAGGCAGCTAATAA # Left flank : AGCCGTATTTATCGATGATGAAAGAGGAAGGGCTATTCAATGTGTCTAGCGTGAAAGAGTTACCAAAGCACTTGCCGGAAGTACGCTTCGTGAGAAACCAGGCCATTGCTAAAACCTTTGTTGCATCGAAGCGAAGGCGAATGAGCAGGGCTATTGAGCGGAATGGCTGCAATAACTACATACCTCAAGCTTCAGAAGAGCGAGAGTTCGACTTTTTTCACCGCATACCAATTGAAAGCAAATGCTCACAGCAAGAGTTTGTTTTGCATGTACAAAAGCAAGATGCTCTTGAGGTTAGCGTCGCTGGTTTCAACTCTTATGGATTGGCAACCAATCAGCGATGGCAGGGAAGCGTACCGAATATCGATTTAACCCTTTTTTCGTAACTTTATAAGTTTCTCTGTAAATCAGATTGTTATTTACCTGACAAAATGATTGGTGTTTTATTGGTTTGAGCAATAAACCCTTGCGCTTAATGCCTTTGCTCACTAATTTTTATA # Right flank : GAACCCACCAAATTTGGTGGGTTTCTTTTTATGACATAGCCACGAATGTGGCAGAACCCTCCGGCTATAGCCGGGGATGAATGTTAGAGCAAAATTCATTGCGTAACTTTGGAACATTGAGGAGCTTTGAATTTTGTTTCAGCCCAAAGATTCGTTATGAAAGCCAACACGCACTCGGATATAAAGCTGTCTGATCTTCGTACTTTTACTTGGACTTCGCAGTTTTAATCTATCAATGAAAAATTTGGGAAATACCCTTTACTGATTAGGATAAGAGAAATACCGTGACTTGAATCTAAAGCCAGCGTTTACGCCTAAACAGCACCAATAGCCCTGATGCCGTCAACAGCATAAAGCCCCAAAGTACAAAGTAGCCATACTTGAAAGATAACTCGGGGATATGTTCAAAGTTCATGCCGTAGATACCAGCAATAAACGTCAAGGGCACAAATATAGCCGAGACAACAGTAAGCAATTGCATGGTTTTATTGAGCTGATGA # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.40, 5:-1.5, 6:0.25, 7:-0.39, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCTGCCGCATAGGCAGCTAATAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //