Array 1 189439-192148 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSUK01000001.1 Bifidobacterium pseudocatenulatum strain OM05-2 OM05-2.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 189439 36 100.0 33 .................................... TTTGAGCACGTACCCGTTCCAGCCATACGTAAG 189508 36 100.0 34 .................................... ATCATAATGCTGGCCTTCGATGATGCTCCGATAT 189578 36 100.0 38 .................................... GTCTCGCCGTCGGGCATGCGTCCCCCCATCAGCGACAT 189652 36 100.0 36 .................................... GGGAAAATGCACCGTACTCACCAACGAATCATGGAA 189724 36 100.0 37 .................................... TATCCATTGACGCGTTGTATTGGTCGTTAAGGTTGGC 189797 36 100.0 37 .................................... TCACGATATGCGAACCGTCCTGCGCCCACATGGTCAA 189870 36 100.0 35 .................................... CCTCCGTGAAGTCGGCGTCGCGCGTCCCGTCCGGG 189941 36 97.2 35 ........................T........... TCATCCTGTGATAGCCACGGCATCTCCTTCGGACG 190012 36 100.0 37 .................................... AATGGACATATGAGTGACGTCAGCGTGCTTAATGAGA 190085 36 100.0 35 .................................... GACCACTTGTTCGCATTGTCCTGCCAGAGTTTGAA 190156 36 100.0 37 .................................... TTGCCACAAAGTCCACAATACAGCTGGAATTGGTAAT 190229 36 100.0 36 .................................... CAGTTGCCCTCCTGCATGTCGAACCAGATTCCGTAG 190301 36 100.0 35 .................................... GATCTGCACAATCTGCTCACCCGTAACGCGCCATG 190372 36 100.0 38 .................................... CGGACAAAAAGGCATCCCAGTATCCGCGCGCTGGGACC 190446 36 100.0 36 .................................... ATGTTGCCGGTACGCGAGTCCCGCTGGAGCTCGACC 190518 36 100.0 35 .................................... CCCATGATATGCCATGTCGGGCGTGCCTTTCCATG 190589 36 100.0 35 .................................... GTGCAGGCAATGCTGTACGCGGCCACGATCGCGGA 190660 36 100.0 38 .................................... TTCTTAAGGGTCAGCTTGACGAAAGCCTTCGGCTTGCG 190734 36 100.0 38 .................................... TTCTTAAGGGTCAGCTTGACGAAAGCCTTCGGCTTGCG 190808 36 100.0 38 .................................... TTCTTAAGGGTCAGCTTGACGAAAGCCTTCGGCTTGCG 190882 36 100.0 38 .................................... TTCTTAAGGGTCAGCTTGACGAAAGCCTTCGGCTTGCG 190956 36 100.0 36 .................................... GCATTCGAGCCATACAGGCACGTCGCGTCCATGCCA 191028 36 100.0 38 .................................... TCCCCTCAAGGACACGGAACGCTATCAGATCGAGCGTT 191102 36 100.0 39 .................................... GCGCAAGCGCAGATCGGCACGCAGTACGCAAGTCAGCAA 191177 36 100.0 36 .................................... GCTAAGACTGGCGAGGAAGTCGTGGAAGACTGCAAG 191249 36 100.0 37 .................................... CCGACCAGCCGGGAAGCCGTCCAGCAGACGAATACTG 191322 36 100.0 36 .................................... GGTTTGAGCGCCGAACTCCTGCCGGAAGACGAAACA 191394 36 97.2 36 ...................................G CTGGTCTGCACGAAGGAACTGTGCGACGAGATCGTA 191466 36 97.2 36 ...................................G AGGTGGCCTGAGCGGTAACCTTCAACACTTCGGCGG 191538 36 97.2 36 ...................................G CGCAAACACCGCGCGCGTCTATAACAAGCAGACCGG 191610 36 100.0 35 .................................... ATTCCAGCGCGCAGGAGGCGCCTCGGCTCATTGCG 191681 36 100.0 35 .................................... GGGTTCATTCGCCGCCGAACAGCTTCTTCGCGATG 191752 36 100.0 36 .................................... GCGCGCGGCGGCAATCCGGAGACTGAAGCCAGGTTC 191824 36 100.0 36 .................................... GAGCTCGTCTTCCGGCGTCAGTGCTTGTTCGTTGCG 191896 36 100.0 37 .................................... GGGGACAATGACCCCGCTGATTTGAGGGACGGGTATA 191969 36 100.0 36 .................................... GAGAGATAATAGTTGGCGAGCCACTGGCTCAGATAG 192041 36 100.0 36 .................................... TTGTCGGAGTACGTGATGGTGAACTGGTGGTTGGCG 192113 36 94.4 0 ..................................AG | ========== ====== ====== ====== ==================================== ======================================= ================== 38 36 99.6 36 ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGGA # Left flank : GATGATAGACGTCGTGATCACGTGGCAAAAATATTACGGTGCTATGGCGAGAGGTTGCAGTATAGCGTGTTCTTTCTGCGGATTCGGCATGCAAAAATGCTGGTTGTCCAGAATCTAATAGAAGTTGAAATCGATGGTTCAACGGATTCAGTTGTTGTCTGTTTTCTCGGAAAAGAAGAGCAGGCAAGAGAGGGAATGTCATTCTTGGGACGACGGGAATACAGTGATTTAACCATTCCGACGGTTATCTGATTTCACTTTAACCTCTCTGATTGTCTTTCACCTATGTGATTGTGGCTTGATAATTCAAAAGGTTTTTTATGAATTTTGGAATACGAGAGGTGAATCATTGCTGCGACACGCGATGACCTCTCGCATGAGGAAATATAAGGGTTTATGTCTCTTTTGCTGGTGATAAACTGACTGGAGGGAGAGGTATCTGTTCCGCTCTCGCAAAGTTTTTAATTCGCTTAGTCATTAGAGCGGATTAGAATGAGACC # Right flank : GTCTATTGGCTCTGATTGTCGTTGTGCGCCCTGGCTTGTGAAGCCGCTTTCTGAATTAGGAATAGCTGCTATCAGGGAGGGCAAGAGAACTATGTCAAATTTGACGTAGATTGTGGCATTTTCTGTGGCCAAGTTCATCCTTGATGAAAGGATTTCTACTTGTAATGTAGTATTGGTGCGTATGATGCTGAGAATTGACGAGCGCGATTTGAGGTCGAAGCTCAATGAGCACAGGAGCCTTATTGGATATGGTTCCAAGGGCGACGGCATCGCCAACATTGTTGCGGGCCTATTCTATATTCCAACAGCATGGACGTTTGCGGAATTGCCGATGCGGGCGCGATGCTTATTTGCTGTGCTGGGTGTTGTGATAATCGCGTTGGGTGTCGCGAGTATTGTATGCAAGGGACTCACTTCCGAAAAACTATATAAGGAAATCGAATCGATGAACAGAAGAGCTAGCTCTCTCATTGCGGTCAAGGATGGCATGGACGCGCTGT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.10,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //