Array 1 4240-4732 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMJT01000011.1 Lysinibacillus alkalisoli strain CGMCC 1.15760 sequence11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 4240 32 100.0 34 ................................ AAGTATTGGTCCTAACACTGCCCACATGGCGTCG 4306 32 100.0 35 ................................ CACTTTTAAATATCTAATGAAGAATTTAACCGAAA 4373 32 100.0 33 ................................ ATTTCGCTCTTTAGCTGCCTCTGCCTCTGCTAT 4438 32 100.0 34 ................................ TCCGTATGATATAACTTTTCCTAAAGTTCTAGGT 4504 32 100.0 34 ................................ ATATTCAACGCCACAAACAACACCAAATTTATCT 4570 32 100.0 34 ................................ AAAAGTAGTTTTAGCAAATTCCACAATATACTCC 4636 32 100.0 33 ................................ AAAGGGTATTTGCTAGGATCAAGCCACATATCT 4701 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 8 32 100.0 34 GTCACTCCCTACATGGGAGTGTGGATTGAAAT # Left flank : ATGTGTTGACCCAGGACATGGCGGTCGAGATCCAGGCGCAGTCAGTCGAGGATACACCGAGGCAGCTTATGTCTTACGTTTTACCTTACGTATACGTGAGATTTTACAAGGCGCAAAGCCTATTGCGCCTATCAAAGATAAAAAGGAGGCTGTAACGATGTTAAATAGTACAGGACGCAAAGAGATTAGAGAGCTACTCAAAAAAGCACGTGCTGCAGGTATCATTGATGCCAAGTATCACACGGATGATAAAATTGCGAAATACAATGATATACAATTATTAAGTTATCAAGCGGCAGTAGTTAATCGAGAGTTTAAATAAATGTAGGTGTCATTTTGTGCGAACCTCATGTGGCGAACCCGAAGTGCCCATGAAATCCCTGGGGGGTTCGCACACCAGATGACCAAAATAAAGAGTTGATGAAATCGAAGAGAATAAAGAACTTTCCAATAATCCCTAGATATAGTACAATGAAAGCGTGAGATAACCATATCTCGCA # Right flank : TCGTGTACTTGGGTGCGGTTTGCTGTAGTTAACACGTCATCCCTCCACGATAATATGACAAATAAAATAGCCACACGGAATAAAAGTCATGTGTTATTGGTATCATTCACAATAGCGCATGACTTTTTTATTTTGCGCTTTTTTAACTAGGATAAGAATGGCAGTTAAATCGCAAAAAATTATCAAAGGCTTATTTTGTAATTTTTAAAAGGGAGGAATAAATGAAGGGGATTTAAGGGGCTGAAAAATCACATAAAAGTCACAAAAAATCACGAGAAAGTCACAAAAAGCATGAAATAAGGAAGGAAAGTGTGAAAGTTCCCTTACTAGATATCGCTTGTAATCCTTGTTATAATAGGCTTTGTGAATAGACAAGAAAGAGGGCGAAAATATGAACGCGTACGATGAATATATGAAGCAAGTAGTACAACCGATGCGTCAAGAATTGGTAGAAGCGGGCTTTACTGAGCTGACTACGGCAGAGGCGGTACATGAGTTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTACATGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCACTCCTTATGTGGGAGTGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 335854-336285 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMJT01000003.1 Lysinibacillus alkalisoli strain CGMCC 1.15760 sequence03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 335854 33 100.0 35 ................................. TTTACCAAAAATAGTAGCTGCATAGTGTGCTTTTT 335922 33 100.0 34 ................................. ATACTTGATTTATAAGGTTTATAATAAAGAAGAA 335989 33 100.0 33 ................................. ATTTGGTAACTCTCCTCTTATACTCCCGTTGCC 336055 33 100.0 33 ................................. ACTAACGAAGATGCTGAGTTGCCCCAAAACTGC 336121 32 97.0 35 ..............-.................. TTCAGTGTACTTGGGTGTGGTTTGCTGTAGTTAGC 336188 32 97.0 32 ..............-.................. GATACAATCACCTCTAGCAAATCTTTGTTTTC 336252 33 75.8 0 ...............A.A.A..ACA.A.A.... | T [336271] ========== ====== ====== ====== ================================= =================================== ================== 7 33 95.7 34 GTCACTCCCTACATGGGGAGTGTGGATTGAAAT # Left flank : TTTTTCTCTGAGTGTAGGGAAAAACAGTAAGTACATAAAAAACTATCTTGCTAACGATATATGGAAAAGATTGATGAAAACCTACCCGGCTGGAGAGTATGCACACGTTTGGTATTCATTATTTGAAGCTATCCATTTATTTGAACAAGTAGCTATTGAAGTAGCTACTATTCTTGGCTACCAATACTCTTCTGAAGATGCGAGTAAGGTGAAAACGTATCTTGCTCAAAATTACGTTTGTTTTGTGAATCCATCTACTAAATAGATAGATGTAACCTGGTTTTAAAAAGATTGCGCAGAAGTTAACGGAGAATTTAAATGAATGAACATGTCACTTTGCGCGAACCTCATGTGGCGAACCCGAAGTGCCCATGAAATCCCTAGGGGGTTCGCACACCAGATGACCAAAATAATACACTTATCAAATAGCATAGGATAAAGAACTTTCCAATAAACCCTAGATATAGTACAATGAAGGCGTGAGATAACCATATCTCGCA # Right flank : TAGCTACATTGAATAAAAGTCATGTGTTATTGGTATCATTCACAATAGCGCATGGCTTTTTTATTTTGCACTTTTTGGATAGGATAAGGTTATCGGCTAAATCACAAAAATTTATCAAAGGCTTATTTTGTGATTTTTAAGATGAGTGAATAAATGGCTGTGATTTATGGGGCTGAAAAATCACATAAAAGTCACAAAAAATCACGAGAAAGTCACAGAAAGCATGAAATAAGGAGGAAAAGTGTGAAAGTTCCCTTACTAGATATCGCTTGTAATCCTTGTTATAATAGGCTTTGTGAACAAAGAAGAAAGAGGGCGAAAATATGAACGCGTACGATGAATATAAGCCTTCAAATATAGAGGAAACCTTTATGTATCAAGGGTTTGAGCGGGTTAATGTTGACCTCAAATGTGACTGAAATCACATTTAAGTCACATTTAGCCCGTTTTCTAATTTTGGAGTAAATCGGAGAATTTATTTTCCATCTTTTCAGAGGCAT # Questionable array : NO Score: 9.05 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTACATGGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 1516-1076 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMJT01000023.1 Lysinibacillus alkalisoli strain CGMCC 1.15760 sequence23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1515 33 100.0 35 ................................. AAAATAAGAACGTTTAGTATCAATGAAACTATAAT 1447 33 100.0 34 ................................. TTTGAGTAACCTCTTAAACTTTTTAGTAACACCA 1380 33 100.0 35 ................................. TGAGGTCGTTAGCGCAGTCCAGAGCGCCTTTTGAC 1312 33 100.0 34 ................................. TGTGGTATCTAGATCAGTTGCGGACGGTACAGGA 1245 33 100.0 35 ................................. ACGCAGCCAAGAAGGTGTTTTTGAAGTTAGTTTAC 1177 33 100.0 35 ................................. TTGATTTGGTATTGGTGGCTTATTTTCTTGGTCGG 1109 33 97.0 0 ...............................T. | A [1081] ========== ====== ====== ====== ================================= =================================== ================== 7 33 99.6 35 GTCACTCCCTACATGGGGAGTGTGGATTGAAAT # Left flank : TTGTATTGATGCAGGGCATGGTGGTCGTGATCCAGGCGCAGTCAGTCGAGGGTACACAGAGGCAGCTTATGTGTTACGTTTTGCGTTACGTGTACGTGAGATTTTACAAGGTGCAAAGCATATTAAGTCTACTACAGATAAAAAGGAGGGTGTAACAATGTTAAATAGTACAGGACGTAAAGAGATTCGCGAGTTACTCAAAAAAGCACGTGCTGCAGGTATCATTGATGCCAAGTATCACACGGATGATAAAATTGCGAAATACAATGATGTACAACTATTAAGCTATCAAGCGGCAGTAGTAAACCGCGAATTTAAATAGATAAACGTGTCATTTTGTGCGAACCTTGTGTGGCGAACCCGAAGTGCCCATGAAATCCCTGGGGGGTTCGCACACCAGATGACCAAAATAATACACTTATCAAATAGCATAGGATAAAGAACTTTCCAATAAACCCTAGATATAGTACAATGAATGCGTGAGATAACCATATCTCGCT # Right flank : TAAGTATGCAAGGAACTATAAAAAAGCCGTTACTTACTAGGACTAACCCTAATAGGTAACGGCTTTGTTTATTTTACTTCAAAATCTTGTTTTCCTAATTCTTTTCCAACTAAGCCTTGTCTGGCAACAAGTGTAACAGGTGTTTCTAAATCATCTAATTCATAAGCAATAGAGTTTTCAACGGTACCATCTTTTTTTATAGATTCCATCTGTGAGTCGAGATGATTTTGGTCGGGTAACATACCAACATTTAATTTATTCACAGCGTTAGGATCATTATCTTGTATTACACTGAACACAGCCATCCAAGATGTGATTGGATCAATATCCTTATCACTTAGATTTGTAGTATCATACCAAATTGCAAAGACAGGTTTTTGACCATATTCATTACCGGGTTCGCCAACAGGAATTACTTTTGTTTCTTTGATTTTAATAGATAAATCTTCAATTTTAACTTCACCATCTTTGAAGTAGACATCTGTAGATGAAATGTCTTC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTACATGGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 7818-7508 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMJT01000007.1 Lysinibacillus alkalisoli strain CGMCC 1.15760 sequence07, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ======================================== ================== 7817 34 100.0 33 .................................. AATCCGTGATCCAACATCTCTTGAATCTCTGCA 7750 34 97.1 34 .................................T CAATAGGTGCCTGTATGGTCACCACATTACCTAT 7682 34 100.0 34 .................................. TTGTTAGATGTTTATTAATTGGTATGGGTGCGCC 7614 34 100.0 40 .................................. TCTTGTGAAAGGCTTGATAGTTTCGATTGCATCGTATCGA 7540 33 79.4 0 ....T..T...T...A.C..-...A......... | ========== ====== ====== ====== ================================== ======================================== ================== 5 34 95.3 36 GTCACTCCCTACATGGGGAGTGTGGATTGAAATA # Left flank : CATTGTTCCAAATATACGGTGCAAGTTTAATTGCGATCGGTATTATTGATTTACTATTGTATATTTATTTAAGACGTAATTTTAAAATTCATAGAGTATAGTAATGAAATAATGAACACACTTAAAAGCATCATTTTCTTTGATAAGGAAAATGATGCTTTTTATGATGTGTAAAAGGCCAGAGATTTTGATTGATAAAGTTAGCTGTGTCCCAACTTCTTTTGAATATACGTCTATTATTAGAAAATCACTTACGGATCGTTAACATAACCATTTTGAGATTAGGCTATAAAGTTCAGCAGTAAATCAAGCACTTAAATAAATTGTAAAGTTGTTTTGTGCGAACCTGATGTGGCGAACCCGAAGTGCCCATGAAATCCCTGGGGGGTTCGCACACCAGATAACCAAAATAAAGGGCTGATGGAATCGAATAGGATGAAGAACTTTCCAATAAACCCTAGATATAGTACAATAAATGCGTGAGATAACCATATCTCGCA # Right flank : ATATATGATGATTTATTAAGAGACTGAATAATGTTGTTCATACAGTAAAAGCCACTTTCTCTCAGGAAAGTGGCTTTTACTATATATGACATATATGTGTTACCATAGTATTGAATAATTAATGGGAGGTAATACCATGACTCAGAAAGAATATATCGTTAAAAGTTTGATTCATAATTATCGAAGCGAAGAGAAGTCTATAGTTGAGCAGTTATTTTTCAAAGCACATCATAATGTAACCATTGGTACGTATAGAGAGCAAGTGTGGCAAGAATTATTTGAAAATATAGTACCAAAGAAATTCGTGGTAGAACAATCTGTTTTTATTATTGATTCTGAAGGAAAGATATCAAGTGAAGTGGATTTGGCCATTTTAGATGTGATGTATACACCATATATTTTTAAAAAAGGTCAATTGAAGTTTATTCCGATTGAAGCTGTAGCTGTAGCTATTCAATGTAAAAGTATAAGCCGTACAAAGTTTAAAGATTTAAAGCTTT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTACATGGGGAGTGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.94%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //