Array 1 2003949-2001460 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068050.1 Burkholderia gladioli strain BBB-01 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2003948 28 100.0 32 ............................ TTGATCGCGAACCACGACACGACCAAGGGCCC 2003888 28 100.0 32 ............................ AACATCGTCAAATGGCGCATGCCACCTCCAAT 2003828 28 100.0 32 ............................ TGGAACGATATCCCCGAAGAAAACTTCGGGAA 2003768 28 100.0 32 ............................ CTCACCATCGTGGTGCGGCTTACAAAGGGTCT 2003708 28 100.0 32 ............................ TGGAAAACGTAGGTCGGGAACGAGCGGTGATG 2003648 28 100.0 32 ............................ ATCACCATCACGTCGGCGCAGTCGCTAATCGA 2003588 28 100.0 32 ............................ ACGCTGCGCGTCACTGCGCCCGTTGCTGGGTT 2003528 28 100.0 32 ............................ GCGCCGGGCAAAATCTTCGCGATCAGCGCACC 2003468 28 100.0 32 ............................ TCGAGTACGGGCGCCGCCGCGGCGAGCTCGAA 2003408 28 100.0 32 ............................ CAAAATGGAGCGCGGGATCTTCGAATCGGATC 2003348 28 100.0 32 ............................ TTTGCGGACATGGCGAACATCGGCTATGCACT 2003288 28 100.0 32 ............................ AGTCGATATCGTCGGGGATCATGCGTGCCACT 2003228 28 100.0 32 ............................ AAGGGATGCAGGACGACAACGAGCACCACAAC 2003168 28 100.0 32 ............................ AGAGCTTCACGTTGCCTTCCCAGGTGTGGTGC 2003108 28 100.0 32 ............................ ATCCGGGGAAGGTTCTCAACGAGATCGACCCG 2003048 28 100.0 32 ............................ AAGCCGGCAGTCGGCCGGATACGAAACGGTGG 2002988 28 100.0 32 ............................ GGAAACCCGCGCCGCATAAGCCTTGCTGGAAA 2002928 28 100.0 32 ............................ AGTGGTCAGTGGACTTCGAGATCGGCGGCATC 2002868 28 100.0 32 ............................ TCCAGCCAGCGCGCAGTCGATTCCATCGAAAA 2002808 28 100.0 32 ............................ GCATTGCGTGTTCTGTCTGCGTGACCTTGGGA 2002748 28 100.0 32 ............................ ATGGCACTCTCGCCGACACACGCTTGTCCGAA 2002688 28 100.0 32 ............................ GTCGACGTTGTCGTCCGCTGAGAAGGTGCTGC 2002628 28 100.0 32 ............................ CGCGCGCCAACTGGGTAAGCAAGTGGGTATTC 2002568 28 100.0 32 ............................ TGGCCGGCCGCGAGACGGACGCCGAGCCGACA 2002508 28 100.0 32 ............................ ATCCGGCGGAATTGAGCGCATAGCAAGCAGCC 2002448 28 100.0 32 ............................ TGCGACGTCCGCGCCCGCCGGCCGGCGAAGTC 2002388 28 100.0 32 ............................ AACTGAAACACGGATTCCAAGGCCTCAGCATT 2002328 28 100.0 32 ............................ CGCTTCGTGCGCCGGAACGTCGCCGATTCCGC 2002268 28 100.0 32 ............................ GCATCAAGATGCTGACCGGCATGGCCCGCGGC 2002208 28 100.0 32 ............................ TATGAGTCGAATCGTGGGAGCAAACATTACGT 2002148 28 100.0 32 ............................ TCGTGCGCGAGGTGCCTCGCGCGGCCACGCCT 2002088 28 100.0 32 ............................ GTTCGGCACCGCGACCTTGCCCAGCGCCGCGT 2002028 28 100.0 32 ............................ ACCGAAGATAAGCAGGCATGGGGTTGGGGTGC 2001968 28 96.4 32 ...........T................ GCCGCGCCGGCGGCGGTTGGAGACGAGCGCCC 2001908 28 100.0 32 ............................ GCGATGAGCTGCTCGGTGAACCAGCCTGTTTC 2001848 28 100.0 32 ............................ CCGCCGCACCGAGAAAGAACCCGCCGCGACAG 2001788 28 100.0 32 ............................ TCGTCCAACTCGCCGGCATGCTCCCGCGCGAC 2001728 28 100.0 32 ............................ AGTTCGGCTTCGATGGCGGCGTCGAGGTCGGC 2001668 28 100.0 32 ............................ TTCTGGGACTTGCTCAGCGCAACCTCCAGACT 2001608 28 96.4 32 ........................C... TTCGATGCAACTGACCTACTGGATTTGACAAT 2001548 28 100.0 32 ............................ ACCAGCAATCCGCGCTTGATCAACTCGACGAG 2001488 28 92.9 0 ...........T.C.............. | T [2001464] ========== ====== ====== ====== ============================ ================================ ================== 42 28 99.7 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGGGGGAAGGGGCTA # Right flank : CTGCGATATGAAAGTCTGGCAGACAGGCAAGCTTTGCCTCCAGCGCGCGTGTTTTAAAATCGCAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGACTGGCTCGAATACCGAGTCGTCCGCGATTCGCGCATGTTCGCACCCGATCGCGGCACAGGCAGCGACACAAACCAGACAGAAAACAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCATCACCTGTCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACGCCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAATACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTATCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //