Array 1 23564-21333 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMTO01000023.1 Streptomyces lateritius strain JCM 4389 sequence23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 23563 29 100.0 32 ............................. GCATCAGGCTGCTGCGCGAATCACGAGGCATG 23502 29 100.0 32 ............................. GACCAGGGCGGCCGGACGGTACGGATACGCGG 23441 29 100.0 32 ............................. GTCGTCGGCGGCACCATCCGCGTGTACTCGCA 23380 29 100.0 32 ............................. TGCCTCATGGCGGTCTGGTGAAGGAGATCCGG 23319 29 100.0 33 ............................. AGGCCCCGGGGGGCCACCCTCCTGATGAGGGTC 23257 29 100.0 32 ............................. AGGGTCTTCCCGATCCTCACGGACATCCTGGT 23196 29 100.0 32 ............................. AAGGGCATGGCCATCTTCTCCAGCCTCATGGG 23135 29 100.0 32 ............................. GCGGAAGCCGACGAGTAGATCCCGTCGTACGT 23074 29 100.0 32 ............................. CCGAGCCTGCCGAATCGACCGACATCTTCGGA 23013 29 100.0 32 ............................. CGCCCGTAGTAGGGGCTGGACGGGTTCCGGTT 22952 29 100.0 32 ............................. GGCGGCGCCATGACCGGGCGGCCGGCGGACGA 22891 29 100.0 32 ............................. ACCCGGAAGAGCACCACGCCCACCACGACGCT 22830 29 100.0 37 ............................. TCTCCGACACCTTGCCGGGTACCTTCCGTGCCAGTGT 22764 29 100.0 32 ............................. ACCTGGATCGTCACATCGCTCGCCGTCTCGGG 22703 29 100.0 34 ............................. ACCGCTCCGCGAGGATCGGCGTCACGAGCGTGAT 22640 29 100.0 32 ............................. GACATCGAAGGCACCGATCCGAGCGAGTCCGT 22579 29 100.0 32 ............................. TTGGCGGGCATCATGACCACCTCTACTCACTA 22518 29 100.0 32 ............................. ACGCCCCCGTCGACCGACCGGGGCCTGTGGCA 22457 29 100.0 32 ............................. TTCCCTCCAGCCGTACTCAGGGTTCGAACCTG 22396 29 100.0 32 ............................. TCGCCTTGCAGGGTGGCGAGGATCCGGTCGGG 22335 29 100.0 32 ............................. GTGTTCGCCCGCCCGGCCTGCAGGCTCGGCTG 22274 29 100.0 32 ............................. TGGGTCTACATGGGCGCGGCCCGCGCGCACTC 22213 29 96.6 32 .............T............... CTCGCGGCTGATCGGCTCCCCGTCCCGGGGCT 22152 29 100.0 32 ............................. GTCGTGGGGCTGGATCCATAGGCGCTGGCCGG 22091 29 100.0 32 ............................. CGGCCCGGAACGGGAGACGACATGACCAGCCA 22030 29 96.6 32 .........................C... TCCTCCGGGGAGGCGTTCTTCAGGCGCTGCAC 21969 29 100.0 32 ............................. GGGGAGATCCAGAGCACCGCGCGCGACATCTT 21908 29 96.6 32 .........................G... CCACCCGCGTCATCACCGCGTGGTCGGCCAAG 21847 29 100.0 32 ............................. GAGCGCCAGGCGCTGTACGGGGAGAAGTCCCT 21786 29 96.6 32 ....................A........ GAGGAGGGCAAGCCCCTGGCCGGGTGCGAGGC 21725 29 100.0 32 ............................. TCAGCACCCTCGCTGCGCATCAGCTCGATTGC 21664 29 100.0 32 ............................. CCGCTGGACGTACGCGTGACGTGTCCCCGCGT 21603 29 100.0 32 ............................. CCCGCACGGCGCGGTCCTCTCCGTTTCGAGGA 21542 29 100.0 32 ............................. GTGTACGACTTCACGAACCTGCGTCAGCACCT 21481 29 89.7 31 .....A....T.................T GGGAGGTCGACGTGGCGCGAGGGCGAGCACT 21421 28 86.2 32 ........A-...G.......G....... GTGCTCTGGCCGTCCTCGACGGTCATCTTTGG 21361 29 86.2 0 ...T..................A.T...T | ========== ====== ====== ====== ============================= ===================================== ================== 37 29 98.6 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TTCCCGATGTCATGCACACCCGCCAGCCACACCGCCAGCCGCCGGCCGTCAGCCTCACCCCCCGGAAGCGCCGCCCCGATCAGTCTGCGAACGCTCACCGGCAGCCATCTGTCCCACAACAGGCCAGCCGCGGCAGCGCTGTCCTCCAGGTGCTGCCACAGCGGCAACCAGCCCTCGGAGTCCCTATCGTGCTTGGCCCAAAGCGTCAGAACCGGCCCACCAAGCATGCTCCGAAGGCCGGAACGGCCCTCCCCCTCACCCGTCATGCCCGATGAATACAGGCAAATCCTGACGCAGGATGTCTATATGACGAGATCAGACAAGATCCCTTTCCAGATCTGGCCATACAGGCAAGGAAGGGGCAGCCAGGCCCTAAGATGATCCCTTTACCCTGGCAGCCAACAGCGCACAGAACATTGCCCCGCATGAGTGATTTGTCGGATTCCATAAAACTGGTCAAAAACTGGTCCCGGCCTCCCTGAACATGCTGGTCACACAGT # Right flank : CGAACAGGATCACCTTCTCTGCGGAGTGGGCGATCGTCGGGAGCAGCGGAGGGATCTGGGCGAGCGCGGCGGATATCAGCTACTCGTCCGGAACGGTCAGGAGGTGCCGCCACACCGCTACCGGCCCGTAACCGTTCTTGGAAAGTTCGGTCGCTTCGGTTCCTATGCGCGGAGCTTGGGGGCGGTGGTGGCCAATGGCTGACGATCGGCTGCCAGGCGGCGGTGTCGTAGAGGGCGGCGGCCTCGAGGTCCAGGTCGTCGGGTATGGCGGTGGTGGTCGGCATCGGTGGGAAGGCTCCATCAGTTCACGTTCCTCCCGGTGAGGAGGCTGGCGGCGCGGAGGGCTCGGCGGAGCGGGCTGTGGTCGTCGGGGAGGTCGGGGTCGAGGTGGGCGACGAGGACGATGGTTCCGTCGGAGAGCCGGACCGTGAGGGTCTCGGGGTCCGGCTCCGGCAGGGTGGTGCGCGGCATGGCGGCTGCTCTACTCGGTGGTGGTGTCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 33230-33441 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMTO01000023.1 Streptomyces lateritius strain JCM 4389 sequence23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33230 29 100.0 32 ............................. GCACCCATCCCCGGCGCCACCCTCACGCTCAC 33291 29 100.0 32 ............................. CCGCGCAACGGGCGCCCCTACCGCCGCCTCGT 33352 29 96.6 32 ..............T.............. ATGCCGAGCAGGAGCAGTCCGACGAAGAAGAC 33413 29 96.6 0 T............................ | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : AGTCGCCGCCGGCCGCAACTACGGCGGAGATGAGGATGAGGCGATGACCTGGTGACCGTGATCGTACTGACCAGCTGCCCGCCGGGTCTCAGAGGCTTCTTGACCCGTTGGCTCCTCGAGATCTCCGCAGGCGTCTTCATCGGCAACCCTTCGGCGAGAATCCGCGACGTGCTGTGGGACGAGGTACAGCAGTACGCCGGCCAAGGCAGAGCCCTGCTCGCTCACACGACGAACAACGAGCAGGGATACACCTTCCGCACCTTCGACCACGCCTGGCATCCGGTCGACCACGAGGGGCTGACGCTGATCCACCGCCCAAATCCAGGAGCAGCCAGATCTGCTGACGACACGGGGCGCAAGACAGGCTGGAGCAAGGCGTCGAAGCGGCGTCGCTTCGGAAAACCATGAGGCCAGAAATGTCCCACACACACCTTTTGCCGATATTTATCAAAGTGGCGTTGAATACACGCGCGCCCACCTAAAGCCGCAGGTCGCGAAGA # Right flank : CTGGCTCATGTCCGGGACGAGTGTGACCTGCCCTGCGAGACCTCTCCATGCCTCATCCCGTCACGCGGTTGGCCGATATCGGGTGCCTCTTGGGCGGAGGATGGCAAGAAAGCGACCTGTGAGAAGGGCACCCCGTGAAAGATTGTGTTCCTGCACCGCGGCCGGCGCGGTTACCCGGCCAACCTTCCGCCGCCACTCCCAGGGGGACAAATTGCGTGCGCTTAGGCTTCTGAGGACGACAGTAGCGGCTTTGATGATCACAGGCGGACTGGTGGTTGCCGGACCGGCATCCTCTGCTCATGCGTCGGCGGCAGACTGCTCGGGAAACGCGAACGGCTTTACAGACATCCCGGACAACCGGACGGGGACCGCCGTCAACGGTGGCGCCGTAAGCAACTCCTGGGGCAATGCGGCGCACTTCGCCCAGCACTGGGGGTACGTCAACGGCGTGAAGATGGGCTGGGGCTACCTGTCAGCGACCAGTCTGCATGGGGGCATCC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 67060-66734 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMTO01000023.1 Streptomyces lateritius strain JCM 4389 sequence23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================================== ================== 67059 29 100.0 32 ............................. AGCATGTCGACGATGACCGGAGCGTCACTGGC 66998 29 96.6 32 ...................A......... TGGCCCAGCGCCGTGACGATGTCGGTGTACGA 66937 29 89.7 68 ..............T.....A.......A CTCCTCGAACTCTCCGAGCAGCTCAAAAACACATTACAAAGGGTCCCGTGGCGCTCACTCAGACCTCC 66840 28 69.0 49 ........A-.T........C.GCCC..T CACCCCGTTCCTCCTCTTCCGCGCCGGGAACTGGACCACCACCCCCTTC A [66838] 66762 29 65.5 0 .A.T...........T.T.C.GA...GGA | ========== ====== ====== ====== ============================= ==================================================================== ================== 5 29 84.2 46 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TGCTGCTCCTGCTGCCCGCGGTCGGCGACGAGAACCTGCCCGACGAGGCCGTCGACATACTTGGCGACGCCCTCACGCGGGCGGGCGTTCCGGCCGGTGAAGCACCGAAGCTGGCGCAAGCACTACTCGTCGACCACCCTCTGTGGGAGCCGGCCGAATGGACGCTTCCCGGGCCCTCCCCGCTCTCCGGTAGCCAGGAGCACTTCCCCGGAATCCTGTACTGCGACGGACCCATGAGCCCACGGTCCGGAAGGCGCCTTGCCCAGGGCATCACCCGTGAGCACAGTGACCGGCTGGCCCATGCACTCGGCACCTGGCCCACCGCATGAACCGCACACGCACAGCACAGGGCCATGCGCAAGTACCTGGGCGCTCTCGGAACTCGGCAACACGGTTTCCGCCGGCTGTGTACCGCTCTCGGCTGTGATCGACAATCGCTCTTGGCTCTCGACGACAAAAGCCAGTCCTCACCACCACCTCATCCAAGCTGCTGGACGAAC # Right flank : TGACGACACACACCTCAAGAAGCTCGGCTTCGATCCGTGGACCGCCACTGAAGGCCTGACCGCCAGTGCCGACATGCTGCCCCTCGCCCTGTGAGTCTGGAAGCGGCAGGAACACCCCCGGTTCGCTGGCGAGCTCGACACGCTCGACTCCGCCGACTACGTCCTGGCCCACGATCTGCCCGACGTCATGGAGCTCCTCGCAACGCTGGACACCAGCTGTGCAGGCACTCGCCGTCACCGGCCTCATCAGCGACGCCAACCGCATTGGTAACGACGGAGGAGACCAGGGCTCGCTCCTCTCGCTCGTCCGTAAAAGCCTCGGGCAGTCCTGATCACGGGCGGCCATGTGCTCGAAGAGCTCGCAGGCCAGGTGCGCGAGCCGGTCGACCGTCGAGCCTCTGGCTGATGCCGGCATCCGTCGTTCGCTCAGGTCCTGCGTCGGCGAAGGTGGGTATCCCCGATGTGCGAGGCGCTGAGCACGCTGTCGGGTGGGGTGATGC # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.21, 5:-1.5, 6:0.25, 7:-0.69, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 68483-68149 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMTO01000023.1 Streptomyces lateritius strain JCM 4389 sequence23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 68482 29 100.0 32 ............................. CAACTCGCCGTGCAGACCCTGATCGACAGCCT 68421 29 100.0 32 ............................. TTGCTACCGCTGGAATGGAAGTCGCACACGAA 68360 29 100.0 32 ............................. CGGGCTGCGGCCTGCGACCGGTCGCCGTCGCC 68299 29 100.0 32 ............................. CAGAGCTACCTCGTCAGCCTCGACGAGGCCAT 68238 29 100.0 32 ............................. GGTGCGCCACCGAGTGCGAGATCGCCTCCGAG 68177 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CTGAAGGCGGGCCTGGAGCCTCCGGACGTCGAACAGCATGTGCGCGAGGGGGAAGGCCAGGGCCGCTCGGATCTCGCTGTTCGGGGACTGGGGCAGTGTGACGCCCCAGGCGTTCACGGCCTGCTCGACGCCGGTGAGGTCGGCGGCCATCATCCGTGGCGACGTCACGAACGGTGGTGTTCCGAGGGAGCACACCCCCGAACCAGTAGACGACAAGCCCGACAGCAAATGTCAGGTTCGCCCAGCCGTACAGCCGCGCACGGAGGATGTGCCCACGCTGCCAGGGCACGAGCCAACCCCAGCGGAGCGCCGCAGCTCCGCTGATACCGGCGTGCAGATTTCGAGGATGGGGCCCTGAGGCAGTAGCCGACGATCTGCGATGATCGTTTGCACACTGTCCATGACTACCGAAAGTTTGAGCCTGCATGAGGCAATTGCCGGACTCTATGAAAGTGGTCAAGACTTGACCGCGGTCTTCATAAACTTGCAGGTCATGAAGT # Right flank : CATGGCTGCGGAGGCCAGACACAAGAGCGTTTGTTGCTGGTTCTTGAGAACACTTCCTGACCGATGGCGTGCGCGGTGTCGACGAGAAACAGCAACGCTTGGGCGGGGTCGAGTCCTCGGGGCGCCGCGCGGCCTGTCAGATGCGGCTGACATGCTCGACTGATGCTGATCGATGGATTTGAGAACGACCCGCTCGTGCCAGGGGAGGAATTGCTGGCGCTGCCGGGGTTCTGGGCCGCCTACCTGTTGTGGATGTGCCAAACCGAGGGAGACGATCCAGATTTGGCATGGTTCGGCGTCGACGAAGCCGACACCGATGCGGCCTCCGATGCCCTGCACGACGAGGAACAGTGGCCGGTCTTCCGGATCCCGTTCTCAGGCGGTCACACCGCAGTGGTCCTTGGCTGCAACTTTCCCGATGACCCGGGAACGGAGTACTTCATCGCCCACCCCGAGTGGGGACGGCACGGTTACCTGGCCACCATCGACGGGCACCAGGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //