Array 1 9118-10936 **** Predicted by CRISPRDetect 2.4 *** >NZ_APCD01000001.1 Anoxybacillus flavithermus AK1 seq_num_001, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 9118 29 100.0 35 ............................. TCGCTCGAACTATGTTATAAAACAAAGCCTACTCG 9182 29 100.0 38 ............................. CACCGATGGACAGGAAATTTGCGTTCGGTTTCAGTTCT 9249 29 100.0 37 ............................. GCGTTCTCTGCTAGAACACAATCGGGTATAGGCTACA 9315 29 100.0 36 ............................. CGATCAGTCACGTTGCCGATCGCTTTCATGATTTCC 9380 29 100.0 38 ............................. ATGCCTCAAAATCAATATACATTTGACCGTTTTCATCA 9447 29 100.0 39 ............................. TCGCGCTGTCATTTTCATAATCACAAAAGGAGAGTTAAA 9515 29 100.0 37 ............................. ATGCAAGACAAGCTTTTTCACACCTTTGAGTTTTAAC 9581 29 100.0 35 ............................. CGGTCTGTGACATTCCCGAACTGACGCATTGCGGA 9645 29 100.0 39 ............................. CCGAGAAGCTTTCCTAATTCAAGAATTTTTGTTTGGAAA 9713 29 100.0 38 ............................. ACACCTGTGACGAAAACAAGCACAAATACGATGAAAGT 9780 29 100.0 39 ............................. GGAGCAGTAGCTAACGGACTTCGTGAAAAAGATTTGACG 9848 29 100.0 39 ............................. TCGCATTTTACTTCTAGTGCAGGGATATTGTCCGTATGC 9916 29 100.0 37 ............................. TTCGTTTTTGAGTTGTTCAAGCTGTTCGGCTGTCTTA 9982 29 100.0 39 ............................. AAAATATTGCGTCATACGATGATCATCTGTTAATTCCGG 10050 29 100.0 37 ............................. CTCTACAAAGAACTAACAGAAATTGAAAATAACCTAC 10116 29 100.0 39 ............................. TTCGTTTCGAGCAAGTTTGCTTGATTGTAAAAGTGTTGA 10184 29 100.0 32 ............................. TGCTTAACGCATGAAAAGCTTCTACGGGGCTA 10245 29 100.0 37 ............................. GCAATTCTTCAGCCTCTAACGCAAGGAATTGTGAACG 10311 29 100.0 36 ............................. CCTAAAAAAGAGATATTATCCCAAACATCAAGCATA 10376 29 100.0 37 ............................. ACTTCAACTTCATCTCCATGTTTCCTCATTAACTACA 10442 29 100.0 38 ............................. AACAAAATTCCACGCAGTATACCCGATTTCCTGCTATT 10509 29 100.0 39 ............................. CGCCTCGTAGACGAGATGCGTCGGCTCCATCTTCACACC 10577 29 100.0 37 ............................. AAATGATATACAAATAATATCTATCATGATATACTAT 10643 29 100.0 38 ............................. AGGGATTGGAAAGCAGAGGCAAAGACAAGATGGGCAGA 10710 29 100.0 39 ............................. AAGAATAGTGCAGCAAGAGATGATATTAATGAGACGTAT 10778 29 100.0 36 ............................. TCGTCTGCGAAAAATTGAAGATTGAGACGTAGCGGC 10843 29 100.0 36 ............................. TATATTCGATCGTTTTTCACAACTTTTCCTTGTTGC 10908 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 28 29 100.0 37 GAGTTATTTGAACGTAGTGGGATGTAAAG # Left flank : CATTTCATTGGCGATGAACTTTATAAACCATTGAAGGCATGGTGGTAACATGTTTGTGATTATTACTTACGATGTGGGGGAAAAGCGTGTAAATAAGGTGTGTAAGAAGTTGAGGGAATACTTAACATGGACGCAAAACTCTGTGTTTGAGGGGGAAATTACTAAAAGTTTGCTTATGAAATGTTTGAACGAGATTGATCAAATTATTGATGAGAATGAGGATTCCATTTACATTTACGAAGTGTCTAACCCGAAGAACATCAAGAAGCAAATTTTCGGACAAGAAAAAAACTTTGACGAACTGTTTCTTTAACAGTTGCAGTGAACCCTGCTTTCAAAAAATAAGGAAAAATTGCTTGATATATCAACAAAAAATGCGGTATTTTTAGTGTAAGGGCAAAACACAACTACCGCTTCACTGCAAAAAGTAGAAACTTGTCGTATCAACGATTTTTCAAAATCGCTGATACGACAGCACTTTGCGTTTTTAGATTTTAGGG # Right flank : GGACATTATGAAAAAGCGTTTCAGCCAAAGTTTGAAAACATCGTTGCTCAAGCGGAGAGGATGATGGCGCCACCGAAGAAGTTTCATGAAGGGGAGTTTCCACATAAAGAACGGCACGGGAGCAGCCATCCATTGCTTGTCATTTTCAATCACTTTTCGTTTTGGGCTGTAGTCATCGTTTTTGTATATTATATTGAAAAACGCATAAGAAATAGACGGAAGCTTAGTAACGTATGAAAAGGTGTCCCGAGCGTGTGGGACACCTTTTTGGCTACGATCCTTTTTTTCCTTTATCATGCTTATAACATTCATGAAACAGTTTCATTAATGCGCGCTTTTCGATGCGTGAGACGTAGCTGCGCGAGATACCAAGATCTTTGGCGATTTCGCGCTGAGTGCGTTCCGGTTGCATATTTAAACCGAAGCGGCTGATAATGACTTGACGTTCACGTTCATCGAGAATGTGTAAATGTTGAGCAATATTTTCGAGCTCATTACTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTATTTGAACGTAGTGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 3191-2342 **** Predicted by CRISPRDetect 2.4 *** >NZ_APCD01000034.1 Anoxybacillus flavithermus AK1 seq_num_034, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 3190 30 100.0 36 .............................. ATAGCTGCCGATGTTTTACCGCTTCCCATGATGGAA 3124 30 100.0 38 .............................. GCGGCATTTGCGCCAAGTCTGAAATTGTAGTGATATTG 3056 30 100.0 39 .............................. ATCGAAGATCATGAGCAGTTACTTTCGTTCTGATTGTTT 2987 30 100.0 39 .............................. AGGATTGATACCCTTATCGGTCGTCCGATCGATCGGACG 2918 30 100.0 39 .............................. AAAAGATTGACAACGAACTAATAACCGTCTATGTCGGCA 2849 30 100.0 39 .............................. ACAAATTTCACTATATCAACACAAGAATAGCCGACAACG 2780 30 100.0 39 .............................. TTTTGTTGTTTGTTTGCTTCTAGTAAGAGTTTTCCGCGT 2711 30 100.0 37 .............................. TATGCAAGATGAGCAACAGCAGGAGCAACAGCAAATT 2644 30 100.0 37 .............................. TCATTTAAATCGTTTATAATTAATTTAGAAAGTTTAG 2577 30 100.0 39 .............................. ATAGCATATAACTCATAAATTTTGCGTTCGGTCTTGTTT 2508 30 100.0 38 .............................. ATCAGACAGCAACAACGGTGCAGATTTCGGCATCGAAA 2440 30 100.0 39 .............................. ACATATCTATTGAACAGCCTCGCGACGAGAAAATACTCG 2371 30 73.3 0 ................CA..A.C.A.C.TG | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 97.9 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : AGCATCGAATCGATCGAAGAAGACGGCACGATTTGCATATATTCCGATGTCGATGAGACGTACAATATGTACGTTTACGATTCTGGGAAAGGAATTCCACAAGACATGCAAGCGACGATGTTTGAGCCGTTTATGACAACGAAACCGTCAGGGACAGGCTTAGGGTTAACGATCGTCAAACGAATCGTTGAAAACCATGGCGGAACCATTGCGCTTCATGACAGTTCGGAAAAAGGCACGACGTTTGTTATTAGGCTACCGATCGGATAATGATGAGAAAAGGAACGGATAAAACGACAAAAGGATAATCAATTTGTTCATCATTTCACAACTGTCGTCGACCTCCAATCTTGCAAAAAACCCGGGGGATCGACGACAGTTTAATTTTTATCACTTTGTCAGACGTATCAAGCGACAAAGACCATTGACTGAATTTTCGGATGGATGTATAATGATATTGTATAGCTTTTCCATGTGTTGATATATCAACACTTTTTTGG # Right flank : TTAGAATCTGGATTTTTTTTGTATATACCATTTTACTTTTTCTTCAACATTCGTTATTATATAGAGTAGAAACATCTTTCTTTCCGGTTATGGTGAAGTAAGATGTTTTTTTCATGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTCGTGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACGGCGAATGGGCTTGTGCGTGATTCGGGGCTGTATGACATTGTTGCGGTCATTGATTCGACAAAAGCTGGTCAAGATGCTGGAGAAGTACTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAGAACGTCAAGTGATTATTGAAGCAATGGAAGCAGGGATGCATATTGTGAATCCCCTTCAAGAGTTTTTAACAGA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //