Array 1 1359180-1358612 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP021927.1 Aeromonas caviae strain WP2-W18-ESBL-01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1359179 28 100.0 32 ............................ GCCAGGGTGCAGCTTGGTGAGGCTATTGAGCC 1359119 28 100.0 32 ............................ TGTCTGCACGGCAAAAAAGCCGGCTGGATGAC 1359059 28 100.0 32 ............................ GGTATCCGGCGGGCCAGGGTGAACACGTCATT 1358999 28 100.0 32 ............................ TTTGATGTCGCGCATCACGCCATCGAACGCCT 1358939 28 100.0 32 ............................ ACTGGTGCCAACCTGTCTCGCCTATCCAAGAA 1358879 28 100.0 32 ............................ ATGAACAACACTTTGAAATGGGGTGTGATTTC 1358819 28 100.0 32 ............................ AACGTCAGCCTCGGAGATCAGGTGCTGGCCAT 1358759 28 100.0 32 ............................ GCAGTCGTAATAGCCGAACTCTATGACGTTGC 1358699 28 100.0 32 ............................ TGGATAAACCACGCGATGGTCTGGTCGTTCAC 1358639 28 82.1 0 ..................TCA....TT. | ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.2 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : GCGGTGTCGTGCGTCGCCATCACATGTATGACCAGACCTTTCAGCGCGCCTTCAAACGTGCCGTAGAACAAGCAGGCATCACGAAGCCCGCCACACCGCACACCCTCCGCCACTCGTTCGCGACGGCCTTGCTCCGCAGCGGTTACGACATTCGAACCGTGCAGGATCTGCTCGGCCATTCCGACGTCTCTACGACGATGATTTACACGCATGTGCTGAAAGTTGGCGGTGCCGGAGTGCGCTCACCGCTTGATGCGCTGCCGCCCCTCACTAGTGAGAGGTAGGGCAGCGCAAGTCAATCCTGGCGGATTCACTACCCCTGCGCGAAGGCCATCGGTGCCGCATCGAACGGCCGGTTGCGGAAAGTCCTCCCTGCGTCCGCTGATGGCCGGCAGCAGCCCGTCGTTGCCTGATGGATCCAACCCCTCCGCTGCTATAGTGCAGTCGGCTTCTGACGTTCAGTGCAGCCGTCTTCTGAAAACGACAGCGATGGTGGACAT # Right flank : CTGGTTGCAGCTAAACCGGAAGGGCCGCTGACTGCAGGTTCATTCCACTCCAAGATCAGTGCAATGCTGGTTATTGAGCTACTGGGTCAACAGCTATTGGAAAATAGGCCAGAGCTGGCGGGAGCTATCTCGGATAGTGCCAAGGCTACGTTGCCTTGGTTGATACAATCGCTAGCGAGGGGAGCATCATCAATACTTGGACACCAGACTGGATCGATGTCCAATGTAATCCATCCGGGTAGTATGTCAGCCAACATCAAATGGCACACTGAGTGGCATACCACAAAAATATAAAAAATTAAAAACCCAACCTAATCAATAGGTTGGGTTTGGTATGTGGCGGAGAGACAGGGATTCGAACCCTGGGTGGCATTGCTGCCACAATTGATTTCGAGTCAATCCCGTTCGGCCACTCCGGCATCTCTCCACGGGCACTCATATTGACCCAACCCTAGCCGGGAAATCAATGTAAATCTCGTTGCAGATCAGACGACTGGCGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1382785-1379457 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP021927.1 Aeromonas caviae strain WP2-W18-ESBL-01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1382784 28 100.0 32 ............................ AAGTCCAGCTTGAGGGCATAGAGCGCTGTCAC 1382724 28 100.0 32 ............................ ATCCCGACGATGATAGCGAGCATCATGATGGG 1382664 28 100.0 32 ............................ AGTACGTCGGCCCGGCTAAGTTGGTGGCGGCG 1382604 28 100.0 32 ............................ CAGGAGGAATTCGACTACCTGATGGACCTTGA 1382544 28 100.0 32 ............................ TCACCTACACCCCCAAGAAACGGTACGACCAC 1382484 28 100.0 32 ............................ ACATATATCTCGGTTCGAGTAACGTTGCTGGA 1382424 28 100.0 32 ............................ TGGCAGAGCGTGATCCCGAACATGATCCAGCT 1382364 28 100.0 32 ............................ ACCGATGGGGCCACCGAACGACGCCAGGGCGT 1382304 28 100.0 32 ............................ TCAGCGAACGTCGACCCGGACATCATCATCTC 1382244 28 100.0 32 ............................ AGCTTGACCTCGGTGGGGCACTCGTCGAGAAG 1382184 28 100.0 32 ............................ TGGGGTGGCTACCGCGACCACCGCGACCACCG 1382124 28 100.0 32 ............................ GACAACCAAGACCGACCCTTTCGAAGGAAACA 1382064 28 100.0 32 ............................ AGGATGACCCCATGGCCCAAGCCATGGTGGCG 1382004 28 100.0 32 ............................ TGGGAAATCGAAGTGCGGGGCAACATCCAGGT 1381944 28 100.0 32 ............................ GACCTGCGCTATGTCCTGCTGACCGATGACTC 1381884 28 100.0 32 ............................ AAGAACTTCTTCGGCTTCGGCGATGACGAGCA 1381824 28 100.0 32 ............................ ATCGGCAGCGTGAAGGACGCGCTGCAGGCGCT 1381764 28 100.0 32 ............................ GTGAAGGTGACATAGGCCACCCCATCTTCTTC 1381704 28 100.0 32 ............................ ACCGGTTAGAGGATGTGTGGGGCAGCGTGGAT 1381644 28 100.0 32 ............................ CGTTCGGCCAGGGCCGCCCGGATGTCGGTTCG 1381584 28 100.0 32 ............................ AGTTCAAGGAGCTGTTCGGTTATGGCTCTGAC 1381524 28 100.0 32 ............................ CTGCCTGTTTGGCCAGTTGAATGAGCGGGCAT 1381464 28 100.0 32 ............................ GTCGAGAGATAGATTAGGCGAAATCCGCCTAA 1381404 28 100.0 32 ............................ TACAGGGCATTGGTGCCAATGTAAAACCGCTG 1381344 28 100.0 32 ............................ GGTGGCCTGCCGAGCGGCATCCTCAGCGATGC 1381284 28 100.0 32 ............................ TTGGCGGCCTGTTGCGGCATAGGCGGCAAAGA 1381224 28 100.0 32 ............................ TCGACGGGGCTTAGTGTGATCTGCCGGGATAT 1381164 28 100.0 32 ............................ AGCACCCGAGTGGATGTGCTCGACGAGGTGAC 1381104 28 100.0 32 ............................ ATGCTGACCCACATCATGGTCAAACTGAAAGA 1381044 28 100.0 32 ............................ ATCATCGGATCCGGTTGCTGGGCCTGAGCCTG 1380984 28 100.0 32 ............................ AATGGCGATGGAAAGCTGTCAGCGGAAGAGGC 1380924 28 100.0 32 ............................ ATATCCAGGTACAACTTGAACTCTCCAACATC 1380864 28 100.0 32 ............................ CAGCTCATGGATGGGCAGGTCGGGCGGACATC 1380804 28 100.0 32 ............................ CCGACGAGCCCGAGCTGGTCGCCGCTACGCAA 1380744 28 100.0 32 ............................ AGATTGGCAAATCCGCATCATCACCACCATTC 1380684 28 100.0 32 ............................ TACCTGAAATTCAGTGAGCCGGGTATGGGGTC 1380624 28 100.0 32 ............................ AAGAAAAGCACCGACAGTACCGAAAGCACCTC 1380564 28 100.0 32 ............................ AATAAAAGCAATCTGGAGCGCGACCTCGATAA 1380504 28 100.0 32 ............................ GGTACCGTCGCGAAAGCGGCCACCCCGGTTGC 1380444 28 100.0 32 ............................ ATCATCGGGTAGGGCTCGTCGTAGGCCGTCAC 1380384 28 100.0 32 ............................ GGTAACAAGCAGGTTGCGGGGGAATACGCCAT 1380324 28 100.0 32 ............................ GGCAGCACTCCGGTCACGCAGATCATTGTCCC 1380264 28 100.0 32 ............................ TGTCGGGCATGACGTGGAACGGTAACCGCCTG 1380204 28 100.0 32 ............................ AGGAAGAGCAGCAGGAAGAAGCCGCATCCGCA 1380144 28 100.0 32 ............................ ATGACGGGCACCGTACCGGATTTCTTGCAGGA 1380084 28 100.0 32 ............................ GGGATCGACATCGAGCTTGGCAAGGCTGTGCT 1380024 28 100.0 32 ............................ CCGACGCGATCCCGCCTGTGGATCAAGCCTAT 1379964 28 100.0 32 ............................ AGCTGCGGGAACTGGGCCTTGATGTCGGCCAC 1379904 28 100.0 32 ............................ TGTCGGGCATGACGTGGAACGGTAACCGCCTG 1379844 28 100.0 32 ............................ TACTACGCCAAGGGCAACTTCACCTACAACCT 1379784 28 100.0 32 ............................ TCGAAAAAGAACTACTGTCCTGTTACCAACCA 1379724 28 100.0 32 ............................ AATGGAGAAAATCGTCATGGCACCAAGAAAAG 1379664 28 100.0 32 ............................ AGTGACTCCACGGCCTGTTTAATTGTGTTCAT 1379604 28 100.0 32 ............................ ACATTGGTGATGCCTGCCGCTGCGATCTTCCC 1379544 28 100.0 32 ............................ AGGAACGCATTACCTCCTGCGCCGATGTTGTG 1379484 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 56 28 100.0 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : TGGCCGAACTGCTTAACCTTACCGAGGTGAACTGGTTGCAGGGGATGCGGGACTATATCCAGCTCGGCGAACCAGAACCCGTTCCTCAGGGAGCCAGCTTTCGTGTGGTAAGGCGGGTGCAGGCCAAGAGCGCTCACAACAAGCGTCGCCGCTCGGTGGCCAAAGGCTGGTTGAGCGAAGAGGAGGCGCAGGTTCGCATCCCCGATGCTCAGCAGAAGGCGATGTCTCTGCCTTATGCCGAAATGCACAGCCTCTCGACCCAAAGCCGGATGCGCCTCTATATCGAACACGGCCCTCTGCTCGATAAGCCTGTCGCCGGGATGTTTAACGCCTATGGGCTAAGCACCACAGCCACCATCCCCTGGTTCTGACCCTCTTTTTCAGGGCGTAGCTAACTCATTGATTTTTCAATGTCTGTTACGCCCTGATAAAAATAGGGTTCAGTGACGGATTTGGGGTAAGTTCTTTAACAATCAATTAGATAGCACTAATATGTAACA # Right flank : TCTGGCTGGCCGCGCTCGGCGATTGTCATTTTCAGAAGACGACTGCACCAGTTGATTGGGCGTAATGGCTGTTGTGCAGCCAGCTCCTGACAGTTCAATATCAGAAGTGATCTGCACCAATCTCGACTATGCTCAATACTCGTGTGCACCAAAGCGAGGTGAGCATGGCGACGGAGGCTCTGTTGCAAAGATTGGCGGCAGTCAGAGGTAGGCTGTCGCTCTGCGCCGATCAGGCGGCTGCTGCGAAATGGTGGTTGAGCATGCCCATGGCCTCCGTCAGCGCCGAGGGCCCAATGCCAAAAGCTCTCTCCACAAGGCGCACCTCGCCCCTGATGCCGGGCTGCAGGCACCAGGGGCGAGCCTGTCCTTTGCGCAGGGCTCGCATGACTTCGAATCCCTTGATCGTGGCATAGGCCGTGGGGATCGATTTGAAACCGCGCACCGGCTTGATCAGTATCTTGAGCTTTCCGTGATCGGCCTCGATCACGTTATTGAGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //