Array 1 168907-169545 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NDHO01000002.1 Corynebacterium diphtheriae strain rz597 rz597_contig000002, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    168907	    29	 100.0	    32	.............................	CCCCTGTGGGTTGTCACCCGCGAGGGCAAAGC	
    168968	    29	 100.0	    32	.............................	ATAACCGAAAAGTTCCCGAATACTACCGATTC	
    169029	    29	  96.6	    32	............................C	TTGCCGCCGCAATCACAACCCTGAAATCCGAG	
    169090	    29	 100.0	    32	.............................	ATAACCGAAAAGTTCCCGAATACTACCGATTC	
    169151	    29	 100.0	    32	.............................	CAAGGGTTGTATCAAAGTCTCGTTGTTGTTCC	
    169212	    29	  96.6	    32	............................C	TTACACCATAGCATAGTGAGTAACTTTTTACC	
    169273	    29	  96.6	    32	............................C	CACGAGTGGACTGCCTCCCACTTTTCTTTCAG	
    169334	    29	 100.0	    32	.............................	CTGCCAGGGCGACAAGGGGCATATCTGTTTCA	
    169395	    29	  96.6	    32	............................C	TCAACATCAACTGCACAGAAACCGGCATCAAC	
    169456	    29	 100.0	    32	.............................	TGCGCTGCTTCGACGCCTCGAGCCATTCGGAG	
    169517	    29	  89.7	     0	...........GT...............C	|                               	
==========	======	======	======	=============================	================================	==================
        11	    29	  97.8	    32	GTTTTCCCCGCACCAGCGGGGATGAGCCG	                                	       

# Left flank :   CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGCCTGCCAGCCCGAATGACACGTAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAAGTCTGCCCAAAGGAAGACGCATAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATACAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAACAGTAGAAATAAAGATGAAGCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT
# Right flank :  CAGGGACTTTGAGAACTGGACCGCCGTGATTCCCTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGAATCTGTGTTTTTCATTCAGAGAAATCAGTAAATGATGGCTCTACTAAAAAATTTTGAAAAAACTAACTTTTAATATCTATAGAGTGTATTCTGTGGAAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGATGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCGGCTCAAGACTATGCTGTGATGCGGCTTTTGCTGGCTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCGTCTTGCTCGAAAAGGGAAAGATCAG

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTCCCCGCACCAGCGGGGATGAGCCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-12.70,-12.70] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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