Array 1 435844-436292 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPQA01000003.1 Pantoea sp. NGS-ED-1003 Contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 435844 28 100.0 33 ............................ CTCGAATCTGTACCAGCTCAACGTTAAAAAACT 435905 28 100.0 32 ............................ CGAACAAGTTCGCCCCGCCCCTTTGGGGTAGC 435965 28 100.0 33 ............................ CTTCCCATTTATTCACAAGCCGTTAAGTAATCA 436026 28 100.0 32 ............................ TGAGTCCGACCATCGTGGCGGCTTACTCCAGC 436086 28 96.4 32 ...........................T AATGCAAGCGGCGAATACACAGTCATTTCTGC 436146 28 89.3 32 ..G....................TA... CGAAATAGCTGACGTCGGTGCGCCGCTGCTGG 436206 28 85.7 32 ....C......C.....T......A... ATCAGCCCCTAACCGACGGGCCCGAAACCCCC 436266 27 82.1 0 ..G..................C.-C..T | ========== ====== ====== ====== ============================ ================================= ================== 8 28 94.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AATGCGCGCCGCCGCATCCTGCTGGCGGACAGCAGCAAATATGGCTCCTGGTCGCTGTTCTGCGCCGCGCCGGTGGATGAGCTGACCGATGTGGTGACCGACAGCCGGTTAGACGACGATGTCTGCCGCACGCTGCGCGAGCGCGGGATTGCGCTGGCGCTGACGGATTAATATTGCTGGCAATTTAACTGGCACGCGCCGTATCCGCTCTTTACTTGCTGGAATAAGAGTGAAGGGTGGGGGACACTGCGCGCGCTTATTAGGGATGAGCGTGATTAAGCGCTGTGCGGATAAGTGCGCTACTGCTGTTTGTTGTGAGAGTAAAGAGCATTTCCCACCTCAGGCTTGATTTTTGAGTGCTTCTCTAAACCCTTTTTTTTGCAGTTTTTTATAACTTATTGAAAAATAAGGTCGGTTTTTGCATGCTAAATAAAAGGGTTAAAGCCGCGCGAATGCGTTTTTTTGCTGGGATATGAGTAGCTTAGTTTGGTAAGGTAACA # Right flank : TCCTGCCCGCAGCCCCATAAAACTAAAACCCCAAAGCCAAAAAGCGCGCGCCTGCCGTCATTGCCAGGCATCGCGCGCCTAATCATTAAAACGTTTTTAATCCCACCGCTGGAATATTGCGGCCGTAGTAAATCTCGCGCATCTCCTTCCACAGCAGGTCGGTAATGCGCTTATGTTCCGCCGGGCTGAGATCTTCAGGACGGGTATTGAACAGATAGTGCTTCAGGTCGAACTCTTTCAGCAACATTTTGGTGTGAAAGATATTTTCCTGATAAACGTTCACATCCACCATGTCATACATCGCCTTCATATCTTCCGACATAAAGTTCTGGATGGAATTGATCTCATGGTCGATAAAGTGTTTCACGCCGTTCACGTCGCGGGTAAAGCCGCGCACGCGATAGTCGACGGTCACAATATCGGACTCCAGCTGGTGGATCAGGTAGTTCAGCGCCTTCAGCGGGGAAATCACGCCGCAGGTTGAAACTTCGATATCCGCG # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //