Array 1 194173-193883 **** Predicted by CRISPRDetect 2.4 *** >NC_014205.1 Staphylothermus hellenicus DSM 12710, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =========================================== ================== 194172 25 100.0 40 ......................... ATTATTTTCCACTCATAATTACCGGTAAGAATAAACCGTG 194107 25 100.0 40 ......................... CTTACATCGCTTATTGTTTGTAGTCTACCAATTTCATTAG 194042 25 96.0 43 ...........A............. TCCCAAATCTTATCTTTTTCCCAGTCTGTTATCCAAGTCCCTT 193974 25 100.0 42 ......................... AGGACCTTGCTCCCTGTTCCATCGTAGTCATATTTTGACTTG 193907 25 92.0 0 .........T.............A. | ========== ====== ====== ====== ========================= =========================================== ================== 5 25 97.6 42 GTAACAACACAGAAAGAATTGAAGG # Left flank : ATAGAGATAATCAGATAAAGCCAAGTAATCGTTTTTACCATATCCCTTAAGCTTCAAACCATGTATCTTCCCAGGAACAACTATCTGAAATACAGATGGGGGAGCATAGGGGTCAGACTGTATACGAGTAAAATAAGCCTTAACACCATCATAATCAAAAACAACATTCCTCAAAGACTTGTAATACCCAAACCCCCTACCAGCAAATCTCCCAAGAAAAACACCAATCTCATCAACAACCAAATAAACCCTATCACTCGAAAACACCAAAACCAACCACCAAATAGAAAAATAATAGAGAAAATATAGAAACCTTACCCACAAACCAATATAGAAAACTGGTCGAACATTTATCATTATACAAACCCGTCAAGGGGTCAGCGATACTAATAAGCCTATAGATAATTGTTCGAACAGGATCAAGCATGGATCAAGTATGGAAAAGCATATATATGTGGTTCGAAGAAAAACTATAAATGTACCAAGGTATTCGAACCAAA # Right flank : TGAATTTCTTCCACTCGGTTCTTCTACTAGTATTCGGTAAATTAAATGTCTGGCTGGGAGGATACAAAAATGATTTTGGTGAGTACAAAATGTCTTGGTGTTTTTATGGGTTTTTCGTTCTTTCTTTATTTTAAGCGTATCAGTGTGTATGCTAGTAGTGGGATAATTATGATTACTGCTATGATCGCTGCTGTTTCGTATGGGAATCCTTGATTGTTGGGGCTTGTGTTTTCGCTTGGTGTATTGCTTGTTTTTTCTGTACTGGTTTGTGGAGGGGTTGTTTGTGTGTGGCTTGTGCTTGTACTGGTGGTGGTTGTGGTTGTGCCTATGGTTGTTGTGGGTGTTGTGCTTGTTGTTTCGCTTGGTGTTGAACTTGTTGTTGTAGCGCTTGCTATGTTTGATTTTGGTCCTTCAACTATGTTGTTTACAGCGCTTACTCTGTAATAATAGGTTTGACCATTAGCAGTGTTTTTATCTGTGAAGCTTGTTGTTGACCCATT # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACACAGAAAGAATTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 432801-432645 **** Predicted by CRISPRDetect 2.4 *** >NC_014205.1 Staphylothermus hellenicus DSM 12710, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================ ================== 432800 23 100.0 44 ....................... GGTATATTGTTCAAGTGTAGTTTGATAGGTTTGGGTTTGATTGG 432733 23 100.0 43 ....................... GGTTCAATTTCCTATAATACCTATTCAACAATACATTATATAA 432667 23 91.3 0 ...G................A.. | ========== ====== ====== ====== ======================= ============================================ ================== 3 23 97.1 44 GTAACAACATAGAAAGAATTGAA # Left flank : CAAGTGTAGATATAGCTATTGGTTTAGGATTATAATTTGCTGAGAAAACATCTTCCAAACCAGGTTCTGCACTGATTAGAAGAGTCTTAACAACTTTACCAGTATAGGGGGGAAGAACAGCTTCCCCCTTTACCTGTAATACAATATGTGCTTTATAATACGTTCTAGGAGAAGCTGAGTAGAGAAGCCTCGAACCAATAATATCAGTTACAAGCATACATAAACACCCCTTCAATTCTTTCTATGTTGCTACCATCCAGATAACCTCAGCAATTACACCACCAAATAATAATAAACAAGAAATAATATAGAAATCTTACCCATAAACCAGTAGATATATAATCGAACACTTATCATTATACAAACCAATCAATACCTCAGCGATACTATTAAGTCTATAGATAATCAGTCGAACACGATCAACCAAGGGACCAAATATAGAAAACCATATATACTTCTTCGAAGAAAAAATAAAAGTGTAACAATGTATTCGAACCAAA # Right flank : AAGCAATTATTGGGTAGGGATTTCTGATGGCGGGGTACCTTCGTTAGTCATGCTTTTAAGTTTCTTCAACTTATTAACTGATCTATGTAGTGCATAGATTACACCAGCAACGAGAGCCGCTACAATTGATAACAGTATTATTATTCCCCAGTCAATGCTTGGACTAATTTGTTCAGTAGCAATATGTATGTCTTTATCAAGTATGAATCCTAAATCAATAGTTTTTGATTCCCCAGGCTTAACAGCTAATATGTTATAAGGGCTTTTCTGTTCAACAGGTATTGTTGATAAGCTCAACTCTTTATTCTTATAGATTAAGATGAGATAGCCAGGGCTATCACCATTATTAGTAACATTTATAGTTGTAGATCCCTTCTGCCCCTTAACAACTATGTTCGCTCCAGGTAATCCTCCAGCTAATATTTCAGCTTTACCTAGATCCTCTTCTAAACCAGTAGCTTTGGCAGGGAGATTTGTTTCGAGTGTTTCAAGCTTATATG # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACATAGAAAGAATTGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 3 487806-487286 **** Predicted by CRISPRDetect 2.4 *** >NC_014205.1 Staphylothermus hellenicus DSM 12710, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================================================================================================================================================================================= ================== 487805 25 72.0 201 A......T.T.C...T....A...T AATATAAACACAAAAACAACACAAAACCTCAATAGAAACTAGTCGAATATTTTACATTATACAAACCCATCAAGGGGTTAGAGATACTATTAAGCCTATAGTGAGCTGTTCGAACAGGATCAACCAAGGGATCAAGTATGGAAAAGCATATATATCTGGTTCGAATAAAAACTATAAATGTAGCAACGTATTCGAACTGAA T [487783] 487578 25 100.0 42 ......................... CCACCTTTAAGCTAAACACTATATGAACTACTCCGTTGTTAA 487511 25 100.0 44 ......................... GGGAATACTGTTGTGTTTGCTAATAGATTAACTGCCTTAGTCAT 487442 25 92.0 42 ........GT............... GCTAATCGCTTGGGTCTAGAAAATATTTCATAGTCTGATCTC 487375 25 92.0 40 ........TT............... GGGGAATAAAACCGTTGCTAATAATCCTCGTAAATTCTGA 487310 25 80.0 0 ...G...T.T...........G.G. | ========== ====== ====== ====== ========================= ========================================================================================================================================================================================================= ================== 6 25 89.3 74 GTAACAACACAGAAAGAATTGAAAG # Left flank : TCAGAGGTATCGACAAGGATGTTATCGAGAAAAGAATCTATGAGATCAGCAAGATTCTAGGCATCCAGCATTTACTCGAGAGAAAACCAGACACACTCAGCGGCGGAGAAAAACAAAGAGTCGCACTAGCAAGAGCCCTCATAGTTGAACCCAAAATAATTCTCCTAGACGAACCACTTGCAAACATTGATCCAGAAAACAAGGTTAAAATAAGATCTTTCATCAAAGAACTAAGAAAGAAAATAAAATTCACAGCAATACACGTAACACACGACATTATCGAAGCAATAGATCTAGGAGACCACATAGCATATATAAACAAAGGCAAACTCATCGGAAAATATACCATAAAAGAATTCCTAAACACAGAATACGCAAAACCATACATCGAAGAAATAAAACCAATAATAAATCATTTATATTAAAACATTATTCCTTCTTACCCACCAAGCCAAACAATATTATACAAATTATCAGACAAAATACTCAATATATCTACT # Right flank : ATTGTTTATATGAATGCGTCTAGGGATTTGTATAGTGTTGGGAATGATTTTATATTGAGTATTAGGCCTATTGTTCCTAGTCCTCCTATAGTTATTACTTATGATATATGCTATTATTGGTGTTGTGTTTAGAGCGTTTATTATTCTATTTATTTCTTCTGTGTTCATGATGGTGTGTAGCATGTAGATTACTGCTTGGGAACATATATAGTGAGATAGGTGTTAACGCAGATGAAATAATTAATCCAATTTTTCTCCTTGCTCGTTATGCATGTATTGATATGAGTAGTGAAAATACGAGGAAGCCTATGTATGGTTATTCGAGATATTCTTTCATATCAACTTCTTTACCATGTTTTACAAATCTTATTTTTAGATCGGGTTTTACTGGAACACCTAGTCTGTGGAGGAGGAGCAGGGTTGTGTAGCCATCGAGTTCTTTAATTTTTCCTTGGTGGATCAAAGTATGGAGGACTTGGATTACTAATGGGTATCTATCG # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:3, 4:0.46, 5:0, 6:0.25, 7:-3, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACACAGAAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [7-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 4 542092-541480 **** Predicted by CRISPRDetect 2.4 *** >NC_014205.1 Staphylothermus hellenicus DSM 12710, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================= ================== 542091 24 100.0 43 ........................ CATAACAATATATTGTTTGTTTTGCCCTCTTGCCCTCTTGCCC 542024 24 100.0 45 ........................ TGAAGAGGGGCTTATGCTTTCATTGTTTGCAGCAGCTAGACCGAG 541955 24 100.0 43 ........................ AGTTATCAACGTTTTTAGCTTTTTGTCAAGCCAAATATGGAGC 541888 24 100.0 39 ........................ AATTGAGGCAAGGTTTAACAATTGGTATCTAGTAATAAA 541825 24 100.0 39 ........................ GGAGCCTATGGGAATTATCAAGTGTTTTCAAAATGTTTG 541762 24 100.0 41 ........................ CAAACGGTTAGATTCTATGTCCCACACGGCTTCCAAGTAAA 541697 24 100.0 40 ........................ ATAATAAGGGTTAAAGCACTTGATAGCAGTGGAAACATAT 541633 24 100.0 43 ........................ GTAGTGGATCAGAAACAACTACTCCTAGCCAGACACAGACACC 541566 24 100.0 39 ........................ CGATCCATGTGATAATAGCCCTTCTTAACCGCTTCTATT 541503 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================================= ================== 10 24 100.0 41 GAAACAATTTAGAAAAATTGAAAG # Left flank : TAAACAATATATATTTGGTTTTTATCATATAGAGTAGCTTGCCCTAAACAGCTTCTCCTTTAAGAACCCCTCATTAGCATAAGTTTTCATCATATAGGATAACATAATTCAATAAGATTTTAGGAGGAGAGAATATCAAGGAATAATCTAGAAGAATTGAAAGAGAGATAAGTAGAGAGCAAAACAAACTATATCCTAGAAAACAAGCAAAAACAATAGTGTAAAAGAATCCCGATCTAAACGAGGAAAACGATCAAAGCCTAATAGTGGGGAAATAGAACAGAGTTCTAAATAGAGTTAGCAATATCATAACAGAGAAAATAGATCGATAATAGATGCGATGGAAGAGTCCCCGCATAGATCGGGAGACCATAAGTTTCAATATATAAGTTTTTCCCAACTAGATCCTCATCAAACCCATTACAAACCATCAAATTATCAAGGATAAAACATAAATACAAAAACAAAAATTAAAATAAACAATGAAAAAGTGAAGAACA # Right flank : TTTCAGTGCTGAGGGAGGTTAAGGAGTTGTTGGAGAGGGAGAAGGGTGAGCGTGATTGGAGTAGTATTCGTGAGGCATTTGAGGAGCTTAGAAGAATCCTTGATGATAGGGATTATGAGGAGATTATTAGGTCTAGCAAGAGTTTTAGGGATGGGTTTAGGCTACGGTGAAGATCTATGATACAAGTGTGTTGATAGATTATTTACGTCGGGGAGAACTTGTTGAAGGAGCAATATCGGTTATTACACTTATTGAGGTACTAAGAGGTGTCCCGCAACATAAGAGAAAGCGTGTTAAGGAGCTTCTTGAAAGGATATATGAGGTTATAGGCATAGACAATGATGTAATAATGAAGTACTGCGAACTATATACTTCACTAAAGCATATGGGACAACTCATCCCAGACGCAGACCTACTCATAGCCTCAACATCTATATCAAGAAACTATGTACTAGTTACCAAGGATAAAGATTTTGAAAGACTAAGAAGTTTGGGCCTCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACAATTTAGAAAAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 5 604890-605050 **** Predicted by CRISPRDetect 2.4 *** >NC_014205.1 Staphylothermus hellenicus DSM 12710, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ==================================================== ================== 604890 23 100.0 40 ....................... CTACTAACTACTATCATTACTCTATTCTCAAATTCCTTGT 604953 23 100.0 52 ....................... TACTATTTTGCCCCTTATACTGATCATTGCCCTCATTCCGTAACAACACAAA 605028 23 87.0 0 ..G...A..A............. | ========== ====== ====== ====== ======================= ==================================================== ================== 3 23 95.7 46 AACAACCTAGAAAGAATTGAAGG # Left flank : CAGTATGAAACCAAGCCTTCTAATATAGTCTCGGAAAATTTTAGGAGTCGTCCTATGATCTCTTAAAATAGTTAAGTAGTATTTTACTAACGGATTATCAACTATTACTAGATCGCCTCTCATATATACCCTCCAACTTATATAGTGATCTATTCCTAAATATTTTTTGCAGGTAAATATTTCAGTATCAAATTAATATAACAAGAAAATCCTTGTATAAAATAAAGGAAAATACAATGTATAGACATGCTGACACCTCATATCTCTCCTCATACATACATTCCAGAATAACCAAGCAATCCTCATACCGAGACAACACATAAACAACTACGCAACATAATCGAACACTTCACATTATACAAACCAGTCAATACCCCAGCGATACTATTAAACCTATAGATAATCAGTCGAACAAGATCAACCAAGGGATCAAATAGAGAAAATAATATATAGTTCTTCGAAGAAAAACTATAAATGTAACAACGTATTCGAACCAGAGT # Right flank : GATATTTCTTATTTTATTTTTAAAGGTGGGTTTTCGGCCCATATTCTACAAGTTCCTTTGCTACTAACCATGCATGGCCCGTATGGATTGCTTGGCGTATATGTTTTCATAAATAATGGGCTATCTGTAGGTTTTGCTATGCCGTGTGTTACTTCTGGACACTTACAACTTGGCAGTATGTCATTGACTGTTTTATCATCTATTTCGAGGTAATGGTATAGATCATGTTTTAAATAATCCTTAGAATTGTATCCTCCACTTCTCTGGGCAACGCCTATTTCTCTCCCATAAGCGTTTCTAACCTCATATGCTTTGCTCATAACTTTCTTAGCAAAGATGTTATCTTCGGGCTTTACGACTCTTATGTATTCATTTATTAGTTTAGGCTTGTTTTCTCTCATGTCTAGTATATAGTATATTGGAAGCAATACATCTATAGGTTCAAAGCCTGCAACAACTGTTGGCATCTTGTATTTCTTGGCAGGGATCTCCAACCATTA # Questionable array : NO Score: 4.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.39, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACAACCTAGAAAGAATTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 6 716213-716498 **** Predicted by CRISPRDetect 2.4 *** >NC_014205.1 Staphylothermus hellenicus DSM 12710, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 716213 25 100.0 41 ......................... CTAACGTTTTCCTTATTGATCACTAAGAATATGGTATGTAT 716279 25 100.0 39 ......................... TTGAAAATCAGCATACGCTCTGGTCCTCTCGGTGCAAAA 716343 25 100.0 41 ......................... ACATTTAGCGATGTTGAATATGTATATATATGTGATGGCAC 716409 25 100.0 40 ......................... CCAATATCCTTTTGTAACAGTTCATTAAGATATTGCCTCA 716474 25 76.0 0 ...G...TCT.G...........A. | ========== ====== ====== ====== ========================= ========================================= ================== 5 25 95.2 40 GTAACAACACAAAAAGAATTGAAGG # Left flank : TGCTTGATTATTTTTGTTTTGTCATTGTGTTGTTCATATATTTTATGGATGATTTTAGATTTTGATTAGATTTATTTAGAAGAGGAAATATGTGAGGAATTGTTTTTGTGGAGTCTGAATGGTTGTATAGTATTAAATATTGATCATATTCTTTACGACTTTCTAAGCTTTACTAGATAATGATTGAAAATGTATAGCGTGTCCACATATAATATGATTAATGCCATACTCTTCATCATCATTATATGAAAACATAAATACACATTGTAGTAATACGAAGCGAAAACAACCAAATACTATAACTATAATGGTAAATAGTACAGCAAACAATAAAGAAAACCAGTCGAACACTTATCATTATACAAACCCGTCGGGGGGTCAGTGATACTATTGAATCTATAGTTGGCTGTTCGAACACGAACAGCGCAGATTAATCATAGAAAAGCATATATATCTGGTTCGAAGAAAAACAAAAAATGTAACAACGTATTCGAACCAAA # Right flank : GTTATTTATATTCATTTACGTTCTAGGCTGAATGGGTTGGGAAATAATTCTTTCAGATTCCTTATAATGGTCTTGCCAGTTTTTACGCTATGCATTATTATGGTTGTTTCAGGATTAAACTCAGCTATAACTTGTCTGCAAGCTCCGCAAGGGGGGATAGGTTTATCTAGATCGGTAACTATTGCTACAGCTACTGGTTCCCGTTCGCCAGCAGTTATCATTGCTGATATAGCTGATCTCTCTGCACATATTGTTAAACCATAACTAGCATTTTCAACATTAACTCCTAAGAAAACATTACCGTTTCTAGTTAGAATAGCTGCTGCTACGTGTATGCCACTATATGGTGCATAACTATTCTTTAAGACGCTCTTAGCTTTCTCAATTAAGAAATCTATGTTGAGGTTTTCCACCATACTGTATCATCTAATATGGTTTTTCTACAATAATATGTAAGGGAGAAGAATAAGTATTTTATTATCTTACCATATAACATTAAC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACACAAAAAGAATTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //