Array 1 246963-250965 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN611423.1 Virgibacillus senegalensis strain SK-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================== ================== 246963 33 100.0 32 ................................. TCCAGGTTAGGACTCACTGTTTCCCCTCCTAA 247028 33 100.0 35 ................................. TTGTTTTGCTGTTAATTTAGCCATTTATGTCATCA 247096 33 100.0 35 ................................. AGAACATAACCAGCATGCTTTTCCATTGATTGCAG 247164 33 100.0 33 ................................. AGTTTTTCGGCAGCTGCCTGTTGCAATCCGGGT 247230 33 100.0 35 ................................. AGGCCGGTATATTGCATCAACTCATATTTTGCAAA 247298 33 100.0 33 ................................. ATCGTGCGCGAAGAAACGGACATCGACAAAATC 247364 33 100.0 35 ................................. AATGACATCGTTCATTTGCTCGCCCTCCGTTTTGT 247432 33 100.0 34 ................................. CCTCGGTCCATTTAAATCCACGTGGATGCATGAT 247499 33 100.0 36 ................................. AAACATTATCAGAAATGGAAAGCCAACAAGACCAAG 247568 33 100.0 33 ................................. CAAATTTTAAAGCTATTGCCTTCATGCGTGTAT 247634 33 100.0 34 ................................. CATATCAAGCCCTGGTTCTTTTCAAAGCACTCCG 247701 33 100.0 34 ................................. CACGTCTTGGCCACAATAAGATTTGTATTTTTCC 247768 33 100.0 34 ................................. TAGCCATCAGCTGTTAACGGCAAGCCTTCCGCCC 247835 33 100.0 35 ................................. AAAACTTTCACCAGTCCGTCTGGTCGTACTTAACC 247903 33 100.0 35 ................................. AGTGCGTCGGAACAATCAACATCCAACTTTATGGT 247971 33 100.0 35 ................................. CGTGATGGAATAGGCCCGGTTGAAGGCACCGACCA 248039 33 100.0 34 ................................. AACATATCGAAGAAGGGTTGATTGATACGGTCCT 248106 33 100.0 35 ................................. TTCAAGTCGATTTGTCCGTCGTGTCCGATGATGAT 248174 33 100.0 34 ................................. AATGCAAGACAATTCGCATTCGCGGCGACCGAAA 248241 33 100.0 34 ................................. TCCTCTACGGTGCCTGGCGTATATCCAATCGACC 248308 33 100.0 35 ................................. GAACACCTACGGGAACACGGTTGGACCGCAACCAT 248376 33 100.0 33 ................................. TGCCAAGTCCAACTTCCAAACCTTGAATCTGGA 248442 33 100.0 34 ................................. TCTTAGAGAATACACCGGTCTGAAAGACATTGAA 248509 33 100.0 34 ................................. TCTACTCTTAATTTCCAAATCTCTGCCAACCGCT 248576 33 100.0 35 ................................. GAGTATCTTTTGTTTGTCTTCCGCCTGCTGAACTA 248644 33 100.0 34 ................................. TCTTATTTGCTTGTAGAGGACTTCCTGAACGTCC 248711 33 100.0 33 ................................. TTCGCAGTGAGTACGAAATCATCGAGCGCCCGG 248777 33 100.0 34 ................................. GTGCCTCAACCGCTTCTCTTAACACAGCCATTAA 248844 33 100.0 35 ................................. CTCGTTGCTGCTGTACCACTCGCTTAGCCAAGCGA 248912 33 100.0 34 ................................. TGGCGTTGTCGAAAACCCTTCCGCCGATAATACA 248979 33 100.0 32 ................................. CGGAGTCATCCGTTAAATGGCTATCCTATCGA 249044 33 100.0 34 ................................. CTTCTGTGATGAATGGTATCTCCGCCGTCCCGTT 249111 33 100.0 33 ................................. CTGATGCATTTTTCGAGGGGGATGACACTTTTA 249177 33 100.0 33 ................................. GAAGTCCTTTGCTGTCTCTTCTCTTCCGTACTT 249243 33 100.0 33 ................................. AATGATCGAGGTGGTCGAAGGATTTACCAAACC 249309 33 100.0 35 ................................. ACATAGCTTTGAAATTGATTCAAGTGCCAGGGCTG 249377 33 100.0 33 ................................. AAATATCATGTCGATCAGTTCTTCATCCCGTTC 249443 33 100.0 35 ................................. AGCCGGGCTACACGCCAAGTGACGAACAACAGACG 249511 33 100.0 35 ................................. AATAAGGATTACACATTAATAGGAGACGCTTTTAC 249579 33 100.0 34 ................................. GGTACTAAAGAAGGCAATCGTCGACTTACAGCCG 249646 33 100.0 35 ................................. TCTGTGATTTGGTTCAACAAGTAGGTATCAAAATC 249714 33 100.0 33 ................................. ATCCTTTGCTAAGCACACCGAAATAAGTTATAC 249780 33 100.0 34 ................................. ATTATGAATCATACACCAACAATCACATCATCCC 249847 33 100.0 36 ................................. AGCTTTGCGATGGACATATTTCGTCAACTGTCTGAC 249916 33 100.0 33 ................................. AAGTCGTTGGCGTGGCGAATCAAAACCATTGTC 249982 33 100.0 34 ................................. AATTTAAAAAGTTTTCCAAGAAGCAGCTGAAAGT 250049 33 100.0 34 ................................. AAATTAGTAAAATTAAATATCAAATACAATACGG 250116 33 100.0 35 ................................. CGTGAAAGGTAATCCGTTTCACTTTTGCGCGATCG 250184 33 100.0 33 ................................. TAAAGCGGATGTATTGATTACACCAAATAGCAA 250250 33 100.0 33 ................................. GGGAGCCATGACAATCGGTTTTGGCGGTTTGGG 250316 33 100.0 36 ................................. GTAAGCCAATCCATTATGCCACCCCACTCATGGCAT 250385 33 100.0 35 ................................. AGCCATGTCATTTAAGGCATCATCTGCTTCCGACA 250453 33 100.0 34 ................................. AATTCCATCCCTCCTATTGTTCAGCTCGAAACGA 250520 33 100.0 42 ................................. TTGCAGCCCTGGCGCTTTCTCTCGGTTCTCTCGGTTCTCTCG 250595 33 100.0 35 ................................. AGCGGAAAGCAGGTGTCGAAGACGACGGTATCTAC 250663 33 100.0 35 ................................. ACCAGCTGTATATCGCTGGTTTTGGTATCATCGGT 250731 33 90.9 35 CG.T............................. ACTGTAGGAGAACAGGATGACGACGGAGAATGGAC 250799 33 100.0 33 ................................. CGCACTGTTAACCGTGAATAGTTGGCATAAACA 250865 33 97.0 35 .........C....................... ATCAAGGGCGATTTCTTTGTGCTTGATGATGCCCA 250933 33 93.9 0 ..................T...........G.. | ========== ====== ====== ====== ================================= ========================================== ================== 60 33 99.7 34 GTCGCTCCCTAGATTGGGAGCGTGGATTGAAAT # Left flank : GCGGAGACCTTGAGGCATATCCCCCTATTTTAGTAAGGTAGGTGTTAAAAAATGTTAGTATTAATCACATACGATGTGCAAACATCTTCTGAAAGCGGGAAAAAACGTTTGCGAAAAGTTGCCAAAAAGTGTGAGGAATATGGTGTTCGTGTACAAAACTCTGTATTTGAGTGCATAGTTGATAGTACCCAACTAAAACAACTGCAAATTGCACTTGAAGAAATTATAGACCCCTCAGTTGATAGTTTGCGTTATTACCGACTAGGTAATAATCATGATACTAAAGTGAAACATATGGGTGCTAAACCGGCAATTAAAGTCGATAAACCTTTAATTTTTTAGCTGCGAACCTTAAGTGAACATAATAATACCGGGGGGTTCGCGTGAAATATTGGTGGTTCACCTCTCATAAAAGTTTAAATAAACATGTGATAATTCTATTAACAAGAAGAAAAATCAATATATAGTATTATATTCGATACGTATACCTATATCTCGCT # Right flank : TACAGGGCCTTTTGCAAAGTCCCTGCCTACATTATGTCGCTCCCTATCGGCCAACCCACCCATGCCGGAAATCAGTAGATTCGTTGTCTCTATCAAGGAGAGACCGGTCAGCAGTCCGGCTACCTCAGCAGCTACAATAATGGCAAATATGACATTCACCCGCATTAAACTCAATGCAATGAGAACAAGAACTGAAATAATAACAACCCATTCCATTAACCTTCCCCCTTATGACTTCTATTCAGAAATTGTAATACCACATGCGCTGCAATCCGGCTTGTCATGTTACGAAAGTCAATCGTCGGATCAATTTCAACGATATCGATGGCACGTACAGGTTTTTCACCGCCAAGATATTGCACCGCCTCCAGAAGCGTTTCGCTGTCCATGCCTCCCGGGCCGATTGCGGGGCATCCGGGAGCAAACGCTTGATCCAATACATCCATATCAACGGAGACATAGATTACATCGACTTTTTCTTTCAAACGACTTACACTTTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTAGATTGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 1 29361-33487 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN611422.1 Virgibacillus senegalensis strain SK-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 29361 36 100.0 30 .................................... ACGAGGTATGTATAACCTGTACCATTATAT 29427 36 100.0 30 .................................... CATCGCTTACGGGCTGTCAACGAAACTACG 29493 36 100.0 30 .................................... AGGTTATCGCTTTAGACGGCGAGGAGTACC 29559 36 100.0 30 .................................... GGAGCAAGGGCATTGATCTTCAGGAAGCTA 29625 36 100.0 30 .................................... TAGTAGAAGCACAAATCAATATTGTAATGG 29691 36 100.0 30 .................................... AATGGCCGGATGCGACACATGGTGACCCTA 29757 36 100.0 30 .................................... GTTTTGGCGTTACATTCTTTTCCGCCATAA 29823 36 100.0 30 .................................... AACACACCACGGCTACATACAGCGATCTGG 29889 36 100.0 30 .................................... ATCCATGTTTGATGAACCTTGCTTCTGTCT 29955 36 100.0 30 .................................... ACGCACCATTGTATAAATTGCTTTATCTCC 30021 36 100.0 30 .................................... GTCAGCCGTGCGTCTAGTTCATTTAATGGT 30087 36 100.0 30 .................................... ATATAAACCGGGACAGCAACGGATTACCAA 30153 36 100.0 30 .................................... TTCGTTGCGAAGAATCCGTCGAAAAAGTCT 30219 36 100.0 30 .................................... CCGCCTGTAATTCGGCGAGCACCTCGGCAT 30285 36 100.0 30 .................................... TCATGAAACCTTGAAAGAGATTGCCAGGTT 30351 36 100.0 30 .................................... GTAAAATGGAGCAAGTGAAGCCAGTATTAC 30417 36 100.0 30 .................................... CTTGTGATAAGTTGTTTAACTTACTTCCGC 30483 36 100.0 30 .................................... AGACATGGACACTGGGGATAGGAGGTCGAG 30549 36 100.0 30 .................................... GTTCAAAGAAAGAAGCTGAAGCAAAGATAA 30615 36 100.0 30 .................................... AACAAGTCGAATATGACGGCGGAACAGCCA 30681 36 100.0 30 .................................... TGACTTGCTTCATATCTTCGCCACTATAAT 30747 36 100.0 30 .................................... CAGAAACAAGATAATCAGTTTGAACAGTTT 30813 36 100.0 30 .................................... GTCAACGCCGGTAGTTTCCGTATCTACTGC 30879 36 100.0 30 .................................... TCTATTTCTCCTTCAATACCGTCAAATTCA 30945 36 100.0 30 .................................... TAAAAGTGCTGCCATTGTGTCTGGGTTTCC 31011 36 100.0 30 .................................... CAAGTCGTCGCTCAAGATCTTGTGTATTCT 31077 36 100.0 30 .................................... TGAAATCATTATTTTAACTGTGGACGCCGG 31143 36 100.0 30 .................................... GCCCTCTACGCCCACGACCGCATCTTCGAT 31209 36 100.0 30 .................................... ACGAAGCTGTTGTTAGTGCAACATTCTCCA 31275 36 100.0 30 .................................... GGATATGGAGCAGCAAGTTCTCGGTCATCA 31341 36 100.0 30 .................................... CCATCGCCCTTGATCGCGACGCACTGGCGG 31407 36 100.0 30 .................................... TCATAGACGAATTAGAAGACCGCGTGCTTG 31473 36 100.0 31 .................................... ACGAACCGTTAAAGGAAATGTTCGAAGGTAT 31540 36 100.0 30 .................................... ACCGTAGGGGAGATTTAATTGTCCCTTTGA 31606 36 100.0 29 .................................... CATTAACGGAATATGGAACGTTGAGCAGC 31671 36 100.0 30 .................................... CAAAGACTCCTACATAAAGCGGAGTTTTGA 31737 36 100.0 30 .................................... CGTGCTATCGAAACTAGGTCGGCAGATTAT 31803 36 100.0 30 .................................... AAGCGGAGGCGGTTGAATGCCATTACCGGA 31869 36 100.0 30 .................................... AAATATTGCTATTCGGTTATGCATTCGATG 31935 36 100.0 30 .................................... TATTGTTAGCACACAATCCCTCCTATCTTC 32001 36 100.0 30 .................................... AATGATTGCGATTGTTTTTCCATCGCGCCC 32067 36 100.0 30 .................................... GTGACGGTGTGAGTTGGAATGGACAATGGT 32133 36 100.0 30 .................................... GTTATTTGCCATTGTTGGTTTCCTCCTCTA 32199 36 100.0 30 .................................... CTCCAGGGGTACCGATGATTTTGGAGTTCA 32265 36 100.0 30 .................................... TGAAGGTGACGGACACAAACGGGGTGCCTA 32331 36 100.0 30 .................................... ATCACCTCGATGTTTTGCGTAACAGTGGCG 32397 36 100.0 31 .................................... CATGGCGCCGGTTTCCTTGTCCTTCGCTAGT 32464 36 100.0 30 .................................... TAAAGCAAGACAATTAATCAAACAAGCAGG 32530 36 100.0 30 .................................... TTCAAAAGGAATGGCACAACCACCGCAATA 32596 36 100.0 30 .................................... GCTAAACGGCCCTCTCCACACAATTACCAC 32662 36 100.0 30 .................................... GCCTGAAAGGAGGTAAAACATGAAGGACTT 32728 36 100.0 30 .................................... GTCGAGCTGGTAAAGCGTACAGTAACCATC 32794 36 100.0 30 .................................... GACTGACAAAGCTCGAAAAGGAAATCAGCC 32860 36 100.0 30 .................................... CCCCCTAATGTGATGATCGCTCCCGCCGTC 32926 36 100.0 30 .................................... GCTAATTGCTGGCTGGTAGGTTCGTAGTTT 32992 36 100.0 30 .................................... CACATGGCCTGTTTGCAAAGTATCTGCCAG 33058 36 100.0 30 .................................... GACAAGTTATAGGATAACGAGAAGGAACAA 33124 36 100.0 30 .................................... TGAAATCGGGATATGACGCCGTTGAACGTA 33190 36 100.0 30 .................................... TAAATCCAAAAGTTGAGAATGTGACGACTG 33256 36 100.0 30 .................................... CCGAATACAAACCTCCGATAGCGTCAGACG 33322 36 100.0 30 .................................... TTAATCAGCATGCTGTTCGAGCATTGGCCC 33388 36 100.0 30 .................................... TAAATCCAAAAGTTGAGAATGTGACGACTG 33454 34 86.1 0 ...................CA.--.......A.... | ========== ====== ====== ====== ==================================== =============================== ================== 63 36 99.8 30 GTTTTAGTACTCTGTGTTTTTAGGTAGTAATGAGAC # Left flank : CTTAAATCAGCCTGGGATTGTCTTTTTCTTTTACCCAGAAACATATCTTAGTCCAAAAGAACAAACAGAAATGCATCAATTACTGCAAATCTTTAGTGAAACTATCCCTGTATTTGTAATCACTAAATCGAAACAGTTTTTAAGTGATAGGTTATCAGGATTGAACTATTTCATTCATAATCACCAAATATTCAGTAAAGAATTTATTGAAGAATTGGAATGGAATAGTCCTGTTAACTATGATTATAATGATTTGGAAAAAAGGGTAGTAACATTATTTCAGCGTTTTGCCGATCTGTTGGAATTAAATCCGACTATTTCTAACTATACAGATGCGGATGTCGTATTGTTTACATCAATCGACCTATATGTATTCGTATCTTTGTTATTTAAAATGAAATTTGAATTTGAACTGAATTTAGATGAATCTCGGATAAATGCTCCCGTTTATAAGTATATTATAGATATTTATGAAAAGATTTGATATGTTTTCATTAGAG # Right flank : CAAATTTGGTAGTTATTCGCAAAAAAAGATAAAATTTTAATTCATATTGAAGCTAGTAGCAGTTTAATTTATGGGACTATTATGTGAAAAAAAGCCTGATTTATTGGAAATCAGGCTTTTCTGGTTATAAGTCAAAGCGAATTAAAACTTATTTTTAATTCGCTTTCCTGCCCGGCTCCGCAGAAGCAATATTCGCTAAAACCGAACCATCCTTTTTGCCGTGCATGAAATAATAAATTACTGTCGTGACGATTACCAACAATCCCATCAAAATATACAGGTTGCGGTATCCGGATAACGGGATGATCAAGCCGAGAACATACGGCCCGAAACCGAGACCTGCATCAAGGGCGATATAGTAAGTGGATGTGGCCAATCCGATACGGTGTGTCGGAGTTACTTTTACTGCGATTGCTTGGGTCGTCGATTGCATGTTACCAAAGCCAAGCCCGATCAGAACACCGGCCAATAACAGGACAAAGCTGTTTCCCGCTGTGCTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTGTTTTTAGGTAGTAATGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //