Array 1 1775633-1777113 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035742.1 Staphylococcus pseudintermedius strain 51_92 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1775633 36 100.0 30 .................................... TCAATACATAGCTTGCTATGATCTTTGAAT 1775699 36 100.0 29 .................................... GGTCGAGATGTACCTGTGCTTTTAGGTGT 1775764 36 100.0 30 .................................... CGCTGCAATTGGTCCATTACTTGTTACTTT 1775830 36 100.0 29 .................................... TGAACATTACCGAACCCTCTTGTGATTAA 1775895 36 100.0 30 .................................... ATTAAGAACAATATAAATGTATCGATTTCA 1775961 36 100.0 30 .................................... ATTAAGAACAATATAAATGTATCGATTTCA 1776027 36 100.0 30 .................................... GCAATGGATCAATTGAAGGCTCGTCAACAA 1776093 36 100.0 31 .................................... GTGTGTCATCAGACTTTACACCTTCAAATAC 1776160 36 100.0 29 .................................... GAACTCTTAAAGTATCTTTTAGGACACTT 1776225 36 100.0 30 .................................... AAAGATTATGCCATCTTCAGTTACTTTAAC 1776291 36 100.0 29 .................................... TCGTTTTGTGATAACAAATCAAGTGATAT 1776356 36 100.0 30 .................................... GATGAGAGGTGTAAAAGCACAATTGCATGA 1776422 36 100.0 29 .................................... TATACGTGCAAACGGTTCTCTTTTAATTT 1776487 36 100.0 30 .................................... CGGCACAGATTGTGTGATTTGTTGACCTGC 1776553 36 100.0 30 .................................... TATTTAGAGATCCTAACGGGCTTCTGGGGA 1776619 36 100.0 29 .................................... CATTACCTTTGTTTGCGTTGTTTGATTCT 1776684 36 97.2 29 ............................A....... GTTAACTGAACTCGAGTGTTGGCGCTTGA 1776749 36 97.2 30 ............................A....... ACAGGCTTAAAGAATCATTACAGTTTGCTA 1776815 36 97.2 29 ............................A....... AGTAATGATTTAGAAAAGCGTGAGCATAA 1776880 36 97.2 30 ............................A....... TTGACCGTGCAAAAATTAATCACAAGGCGC 1776946 36 97.2 29 ............................A....... CATTGTGGATATTTTCAAGCAGTGCTTCT 1777011 36 97.2 30 ............................A....... GTTATGATGTTTGGCGATATGGGTCGTCGT 1777077 35 83.3 0 T........T................-.CA.C.... | TC [1777109] ========== ====== ====== ====== ==================================== =============================== ================== 23 36 98.5 30 GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC # Left flank : TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTTACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGGGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCCAAGCCTCAATTTTGAAAAGGATTGAGTTAATATTTTTGGATTTGAG # Right flank : CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAGATAAATAGAAAGTAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCACATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC # Alternate repeat : GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //