Array 1 1137633-1138459 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FBQZ01000001.1 Campylobacter coli isolate C9A1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
   1137633	    36	  83.3	    29	AACCG.T.............................	CTAAAAAACACAACGGTATTTATACTTTT  	
   1137698	    36	 100.0	    30	....................................	AAAATGCTCTTATTGTTTATACCTTTCATA 	
   1137764	    36	 100.0	    29	....................................	ATAACTGGGCTGAAGAAATGTATCTTGCA  	
   1137829	    36	 100.0	    31	....................................	CCATTCCACACTTGCATTCGGCTTTCCGCCA	
   1137896	    36	 100.0	    30	....................................	AATTGTGTTTGCCAATTTTGAGAGTAGGCA 	
   1137962	    36	 100.0	    30	....................................	ACAAGCAAGCAGTTTAACTATTTAAGCGAG 	
   1138028	    36	 100.0	    30	....................................	GTAAAAATCATAATTAAAGTATTCAGTCAA 	
   1138094	    36	 100.0	    30	....................................	TCATATGCTTTTTGTCCTGCCCAACCTATT 	
   1138160	    36	 100.0	    30	....................................	AAAGCTGGTGATGAAATAGGTTTATTTGCT 	
   1138226	    36	 100.0	    30	....................................	TCTTTATATTTATCCCTTAGCCCAACTATT 	
   1138292	    36	 100.0	    30	....................................	AAAGCTAAATCTAATACTTTGATATTATTT 	
   1138358	    36	 100.0	    30	....................................	TATAGCTAATTTTGGAAATATTGGAGATAG 	
   1138424	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        13	    36	  98.7	    30	GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT	                               	       

# Left flank :   TTATATCCTGCTCATCTTTCACTTGCTAAGTCTTAATCATAAGCTTAAAAATGATTATTTTGCTAGAGTTGCCATAAACTGCGTGGCATTGTTTATTTTTATTTATGCGGGGGTTAATATTTCGATGACTATAGGATTTGCACCGGTTGTCGGTATACCACTGCCTTTTTTTAGTTATGGTGGAAGTTCTTTTACAATTTTTATGATTTTCTTTGGAATTTTACAACATTTAATCACTTTTAGATATTTTTGGACAGATAATAAAAATAAATAAAATAACTTTAAGCAAAGATAAGATATAATTCTATCTTCACAAATCAAAGGCGGATTTATAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTTGGTCGCAGGTTCGAGTCCTGCTAAATCCACCACTACTTTAGTTGTAGATATCTAATCCCAAAAAATGAATTAAATTAACTTTAACTACAAATAATCTATACCGTTTACTATCACCTTAAATTGAAATAGA
# Right flank :  TAGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTGCTTGATTGAATATCAATATACTTTTAAAAGCTTCATCATAGGCCATGTTTTTTGCTCGTCTTTAAGGCGATATCTTCCCTTAGTTTAAAATCAGCCTTGATTTTTTCTCCAAGCGGGGTTATAATGTATTTTTCAAAAATTTTCAATCCCTGAATTCCTAATTTTTTAGCCTTTACATTTCCTTCTTCTGCATTTGTAAACAATAGCTTTTGATTGTCTGTTAAGTTTTCAAATTTATTATCATGTTTTTCAACACAAATACTTGAGTTACTGATATCAAAACTATTATAATAAGCAAATTCGGG

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:80.56%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.41   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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